Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0298400-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:7271228:7276768:1 gene:Os09g0298400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-170 description:WD40/YVTN repeat-like domain containing protein. (Os09t0298400-01)
Sequence

ATGGAGGGGAAAGAAGACGACAGACGGCGGGGCGGCGGTGGCGGAAGCTCGACGCCGGGG
ATGAACCTGAAGAACCTGGTGTCGAGGGAGTATTTCGGCCACAAGAAGAAGGTGCACTCT
GTAGCATGGAACTGCCTAGGCATGAAGCTTGCTTCAGGCTCTATTGATCATACTGCACGT
GTATGGAGTATCGATCCCCATGGCCATTCCAAGGTTAAAGACATTGAATTGAAAGGCCAC
ACAGATTGTGTAGATCAGCTCTGCTGGGATCCGAAGCATCCTGATACAGTTGCTACAGCA
GCTGCTGACAAGTCAATTCGCCTCTGGGATGCACGGAGTGGAAAATGTCAAGTCGTCGAA
CTTAGTGGAGAAAACATCAATATCACTTATAAACATGGTGGTACTCAAATAGCTGTTGGA
AACAAGGAGGATGAGTTGACAATAGTGGATGTTCGGAAGCTAAAAGCCCTTCACAAATTT
AAGTTTAATTATGAGATAAATGAGATTGCATGGAACAAAACTGGAGATTTATTCTTCATC
ACTACTGGACTTGGAAATGTTGAGGTATTTGGTGATCCTTCCCTTGATGACACCCTTCAT
GTGGTTGGCAAATTGAATGCTCATACAGCGGGTTGTTATTGCATTGGAATGGATCCCCTT
GATAGGTATTTTGCTGTTGGAAGTGCAGATTCACTTGTCAGTCTTTGGGATGTCAAAGAG
CTCCTTTGCATTAAAACCTTTACCAAACTCGAGTGGCCTGTAAGAACAGTTAGCTTCAAT
CATACTGGAGAGTTTCTTGCATATGCTAGCGAAGATCCCTTCATTGACATTGCCAATGTT
CAAACTGGACGATCGATTCATCAGATTCCATGCAAGGCAGCTATGAATAGTGTTGAATGG
AACCCCAAGTACAACCTCCTGGCTTACGCAGGAGACGACAAGAACAAGTACCAGGCTGAT
GAAGGTGTTTTCCGAATATTTGGCTTTGAAAGCACATAA

Peptide Sequence

PEP ID

Os09t0298400-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:7271228:7276768:1 gene:Os09g0298400 transcript:Os09t0298400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-170 description:WD40/YVTN repeat-like domain containing protein. (Os09t0298400-01)
Sequence

MEGKEDDRRRGGGGGSSTPGMNLKNLVSREYFGHKKKVHSVAWNCLGMKLASGSIDHTAR
VWSIDPHGHSKVKDIELKGHTDCVDQLCWDPKHPDTVATAAADKSIRLWDARSGKCQVVE
LSGENINITYKHGGTQIAVGNKEDELTIVDVRKLKALHKFKFNYEINEIAWNKTGDLFFI
TTGLGNVEVFGDPSLDDTLHVVGKLNAHTAGCYCIGMDPLDRYFAVGSADSLVSLWDVKE
LLCIKTFTKLEWPVRTVSFNHTGEFLAYASEDPFIDIANVQTGRSIHQIPCKAAMNSVEW
NPKYNLLAYAGDDKNKYQADEGVFRIFGFEST

Transcript Sequence

Transcript ID

Os09t0298400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:7271228:7276768:1 gene:Os09g0298400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-170 description:WD40/YVTN repeat-like domain containing protein. (Os09t0298400-01)
Sequence

GGTAAGGATAACGCATGAACTTGTGGCATGAATAAACAAAAAAGTAGAAGGACGTTTCTG
CGAAAACCCTCTCCTCTTCCCCGCCGACGCCGTCCCCGGCTCTCCCTCCTCCGTCTCGCG
CCCGCCGCCGCCGCCACCGCCACCGCCGCCGCCGCCTTGCGCCTCGTGACGCGGTGAGTG
GGGAATAGCAAAACCAGACCCGTGCCCCAGTCCGCGGGGACAATGGAGGGGAAAGAAGAC
GACAGACGGCGGGGCGGCGGTGGCGGAAGCTCGACGCCGGGGATGAACCTGAAGAACCTG
GTGTCGAGGGAGTATTTCGGCCACAAGAAGAAGGTGCACTCTGTAGCATGGAACTGCCTA
GGCATGAAGCTTGCTTCAGGCTCTATTGATCATACTGCACGTGTATGGAGTATCGATCCC
CATGGCCATTCCAAGGTTAAAGACATTGAATTGAAAGGCCACACAGATTGTGTAGATCAG
CTCTGCTGGGATCCGAAGCATCCTGATACAGTTGCTACAGCAGCTGCTGACAAGTCAATT
CGCCTCTGGGATGCACGGAGTGGAAAATGTCAAGTCGTCGAACTTAGTGGAGAAAACATC
AATATCACTTATAAACATGGTGGTACTCAAATAGCTGTTGGAAACAAGGAGGATGAGTTG
ACAATAGTGGATGTTCGGAAGCTAAAAGCCCTTCACAAATTTAAGTTTAATTATGAGATA
AATGAGATTGCATGGAACAAAACTGGAGATTTATTCTTCATCACTACTGGACTTGGAAAT
GTTGAGGTATTTGGTGATCCTTCCCTTGATGACACCCTTCATGTGGTTGGCAAATTGAAT
GCTCATACAGCGGGTTGTTATTGCATTGGAATGGATCCCCTTGATAGGTATTTTGCTGTT
GGAAGTGCAGATTCACTTGTCAGTCTTTGGGATGTCAAAGAGCTCCTTTGCATTAAAACC
TTTACCAAACTCGAGTGGCCTGTAAGAACAGTTAGCTTCAATCATACTGGAGAGTTTCTT
GCATATGCTAGCGAAGATCCCTTCATTGACATTGCCAATGTTCAAACTGGACGATCGATT
CATCAGATTCCATGCAAGGCAGCTATGAATAGTGTTGAATGGAACCCCAAGTACAACCTC
CTGGCTTACGCAGGAGACGACAAGAACAAGTACCAGGCTGATGAAGGTGTTTTCCGAATA
TTTGGCTTTGAAAGCACATAACTGATGGTTAGCAGATTACCGTCACCAACTATTCATTGT
AGATTGATTTCCGAGTTCTGATCTGCATTTCTGACAGCAGTTTGGGTCCTGATTGTAACT
TCAATTTTATTAATGTCCTGGCCGCTTGAACTGAATTGTATTGTACTTTGTGACTCGAGA
GTCGAGACCCATATTTTTGTTAGAGTAAATTTC