Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0298100-00
CDS Infomation	cds chromosome:IRGSP-1.0:9:7240336:7244713:1 gene:Os09g0298100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 4, PFP-alpha subunit 4 description:Similar to predicted protein. (Os09t0298100-00)
Sequence	ATGTCCATGAACGCGGACCTCGGCAAGCCGAGGGAGCTCACCGGGTTGCAGCAGAGGAGG GCTCTGTATCAGCCGGAGCTGCCTCCATGCCTTGAGGGAAAGGCCATCAGAGTGGAGTTT GGCGATTCGACGACGACCATCGACCCGACATGCGCAAATATGGTTGTGCAGGAATTTCCC AACACCTTTGGTCAGCCTCTGGTACATTTCCTGAAGCCGAACAAGATGGATGCGCAAGCC AACGATGAACATCCACCAATCAGGGTTGGTGTGGTGTTCTCTGGGAGGCAATCGCCAGGG GGGCACAATGTGATATGGGGCATCTATGATGCTATGAAAACTCAAAATCTACAAAGTGTT TTGCTTGGATTTATTGGTGGCACAGAAGGCCTATTTGCAAATCAGACATTGGAGATCACA GATGATGTTCTTTCAGCATATAGAAACCAAGGTGGTTTTGATTTTCTCGGCAGAACTGTT GATCAAATCCACACAACTGAGCAAGTGAATGCTGCAATGTCAACATGCTGTGATCTTGAC TTGGATGGCCTCGTCATCATTGGAGGGGTGACCTCCAATTCAGATGCTGCTCAGCTTGCA GAAACATTTGCCAATCACAACTGCAAGACAAAGGTTGTAGGCGTGCCTGTTTCATTAAAT GGTGATCTCAAGAATCAGTTTGTTGAGACAACTGTTGGGTTTGATACAGTGTGCAAGGTG AATTCCCAGCTTATAAGTAATGTTTGCCTCGATGCAATCTCAGCTGGGAAGTACTACCAT TTTGTCCGTGTGATGGGTTGGAAAGCATCTCATGTTGCCTTGGAGTGTGCACTTCAATCA CAACCAAATATGGTTATTTTAGGGGAAGAAGTGGCATTTTCCAAGCTCACTTTGAAGGAA ATTATAAGCAAGATATGTGATGGAGTGCAAGCAAGGGCAGCACAAGAGAAGTACCATGGT GTATTACTTATTTCGGAGGGACTAATCGAAAGCATTCCAGAAATGTTTGCACTTATTCAG GAAATTAATATTCTCCACAGCAATAAAGTTCCTGAGAACAACATTCCATCTCAACTTTCT CCATGGGCTACTGCCTTGTATAATTACTTGCCTCCTTTCATAAGAAGAGAGTTGCTGCTA CATCAAGACTCCGATAACTCAGCACAATTGTCCCAGATTGATACTGAGCAACTCTTAGCT CATTTAGTAGAAGCAGAAATGAACAAGCGAATGAAAGAGGGGAAATACATTGGAAGGAAA TTCAGCTCCGTTTGCCACTTTTTCGGGTATCAAGCGCGAGGATCCTTACCATCAAACTTC GATTGTGATTACGCCTATGTTCTTGGTCATATCTGCATGCACATACTAGCAGCTGGGCTG AATGGTTACATGGCTTTTGCAACAAATCTGAAGGAACCAACAAACAAATGGCGATGCGCT GCCGTTCCTCTAACAGCAATGATGAGTGTGAAGAGGCACTCACGCAGTCCTGGAGCTGTT CCTACTGGAAAGCCAGTTATCCATCCTTCTCCAGTTGACCTGCAAGGGAAGGCTTATGCG CTCCTGAGAGAGAAAGCCTCGAGCTTCCTATTAGATGATTTCTACAGAACTCCAGGGGGC ATTCAATTTGATGGATCTGGAACAAATGTTAAGCCAATCACACTGACTGTCGAAGACCAA GACTACCTGGGTGACATTGAGCTACTGCAAGACTACTTGGAGAAGGTGAGGAACATTGTG AAGCCCGGATGCTCGAGGGAGATCCTGAAGGCGGCGATAAGCTCGATGTCATCAGTGAAG GATGTGCTGAAGGTTATGTCGGCTCCCTTCTATGCAGAGCTCCCTCTGTTCAATCTGAAC TGA

Peptide Sequence

PEP ID	Os09t0298100-00
PEP Infomation	pep chromosome:IRGSP-1.0:9:7240336:7244713:1 gene:Os09g0298100 transcript:Os09t0298100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 4, PFP-alpha subunit 4 description:Similar to predicted protein. (Os09t0298100-00)
Sequence	MSMNADLGKPRELTGLQQRRALYQPELPPCLEGKAIRVEFGDSTTTIDPTCANMVVQEFP NTFGQPLVHFLKPNKMDAQANDEHPPIRVGVVFSGRQSPGGHNVIWGIYDAMKTQNLQSV LLGFIGGTEGLFANQTLEITDDVLSAYRNQGGFDFLGRTVDQIHTTEQVNAAMSTCCDLD LDGLVIIGGVTSNSDAAQLAETFANHNCKTKVVGVPVSLNGDLKNQFVETTVGFDTVCKV NSQLISNVCLDAISAGKYYHFVRVMGWKASHVALECALQSQPNMVILGEEVAFSKLTLKE IISKICDGVQARAAQEKYHGVLLISEGLIESIPEMFALIQEINILHSNKVPENNIPSQLS PWATALYNYLPPFIRRELLLHQDSDNSAQLSQIDTEQLLAHLVEAEMNKRMKEGKYIGRK FSSVCHFFGYQARGSLPSNFDCDYAYVLGHICMHILAAGLNGYMAFATNLKEPTNKWRCA AVPLTAMMSVKRHSRSPGAVPTGKPVIHPSPVDLQGKAYALLREKASSFLLDDFYRTPGG IQFDGSGTNVKPITLTVEDQDYLGDIELLQDYLEKVRNIVKPGCSREILKAAISSMSSVK DVLKVMSAPFYAELPLFNLN

Transcript Sequence

Transcript ID	Os09t0298100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:7240336:7244713:1 gene:Os09g0298100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 4, PFP-alpha subunit 4 description:Similar to predicted protein. (Os09t0298100-00)
Sequence	ATGTCCATGAACGCGGACCTCGGCAAGCCGAGGGAGCTCACCGGGTTGCAGCAGAGGAGG GCTCTGTATCAGCCGGAGCTGCCTCCATGCCTTGAGGGAAAGGCCATCAGAGTGGAGTTT GGCGATTCGACGACGACCATCGACCCGACATGCGCAAATATGGTTGTGCAGGAATTTCCC AACACCTTTGGTCAGCCTCTGGTACATTTCCTGAAGCCGAACAAGATGGATGCGCAAGCC AACGATGAACATCCACCAATCAGGGTTGGTGTGGTGTTCTCTGGGAGGCAATCGCCAGGG GGGCACAATGTGATATGGGGCATCTATGATGCTATGAAAACTCAAAATCTACAAAGTGTT TTGCTTGGATTTATTGGTGGCACAGAAGGCCTATTTGCAAATCAGACATTGGAGATCACA GATGATGTTCTTTCAGCATATAGAAACCAAGGTGGTTTTGATTTTCTCGGCAGAACTGTT GATCAAATCCACACAACTGAGCAAGTGAATGCTGCAATGTCAACATGCTGTGATCTTGAC TTGGATGGCCTCGTCATCATTGGAGGGGTGACCTCCAATTCAGATGCTGCTCAGCTTGCA GAAACATTTGCCAATCACAACTGCAAGACAAAGGTTGTAGGCGTGCCTGTTTCATTAAAT GGTGATCTCAAGAATCAGTTTGTTGAGACAACTGTTGGGTTTGATACAGTGTGCAAGGTG AATTCCCAGCTTATAAGTAATGTTTGCCTCGATGCAATCTCAGCTGGGAAGTACTACCAT TTTGTCCGTGTGATGGGTTGGAAAGCATCTCATGTTGCCTTGGAGTGTGCACTTCAATCA CAACCAAATATGGTTATTTTAGGGGAAGAAGTGGCATTTTCCAAGCTCACTTTGAAGGAA ATTATAAGCAAGATATGTGATGGAGTGCAAGCAAGGGCAGCACAAGAGAAGTACCATGGT GTATTACTTATTTCGGAGGGACTAATCGAAAGCATTCCAGAAATGTTTGCACTTATTCAG GAAATTAATATTCTCCACAGCAATAAAGTTCCTGAGAACAACATTCCATCTCAACTTTCT CCATGGGCTACTGCCTTGTATAATTACTTGCCTCCTTTCATAAGAAGAGAGTTGCTGCTA CATCAAGACTCCGATAACTCAGCACAATTGTCCCAGATTGATACTGAGCAACTCTTAGCT CATTTAGTAGAAGCAGAAATGAACAAGCGAATGAAAGAGGGGAAATACATTGGAAGGAAA TTCAGCTCCGTTTGCCACTTTTTCGGGTATCAAGCGCGAGGATCCTTACCATCAAACTTC GATTGTGATTACGCCTATGTTCTTGGTCATATCTGCATGCACATACTAGCAGCTGGGCTG AATGGTTACATGGCTTTTGCAACAAATCTGAAGGAACCAACAAACAAATGGCGATGCGCT GCCGTTCCTCTAACAGCAATGATGAGTGTGAAGAGGCACTCACGCAGTCCTGGAGCTGTT CCTACTGGAAAGCCAGTTATCCATCCTTCTCCAGTTGACCTGCAAGGGAAGGCTTATGCG CTCCTGAGAGAGAAAGCCTCGAGCTTCCTATTAGATGATTTCTACAGAACTCCAGGGGGC ATTCAATTTGATGGATCTGGAACAAATGTTAAGCCAATCACACTGACTGTCGAAGACCAA GACTACCTGGGTGACATTGAGCTACTGCAAGACTACTTGGAGAAGGTGAGGAACATTGTG AAGCCCGGATGCTCGAGGGAGATCCTGAAGGCGGCGATAAGCTCGATGTCATCAGTGAAG GATGTGCTGAAGGTTATGTCGGCTCCCTTCTATGCAGAGCTCCCTCTGTTCAATCTGAAC TGAAAGTTACCTTCATCAGACAAGAAATTTTTGTCAGTTAGTCATTGGGTTCATCATATG ACATCAGTCCATCTAGTAGAATTGGATCAGAATCATGAGTGAGTAGTGGTTA