Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0297400-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:7222188:7225657:-1 gene:Os09g0297400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1 description:Similar to Phosphate/phosphoenolpyruvate translocator. (Os09t0297400-01)
Sequence

ATGCAGAGCGCGGCGGCCGTCGGGCTCCTCCGGCCATGCGGCGCCACCACCGCCGCCGCC
CCGCTCCAGCTCCGCAACCCTAGCCCCCGGGGCTTCGGCGTCGGAGTCGGGCAGCCGCTG
CTCCCGCCGAGGGGGCTCCGCCTCTCCGCCGTGGCCCCGCGCGCGGGCATCTCCGCCCGG
CGCATCGGGCTCGTGCCGGCCTCCCCGGAGCAGGAGGATGAGCGGCGGCGGGGCGCACGC
GACGTGGCCGTGGCGGCGACAGCGGCGGCGGCGGGTGAGGCAGGGGCGGAGGAGGGTGGA
GGGCTCGCGAAGACGCTGCAGCTCGGCGCGCTCTTCGGGCTGTGGTACCTCTTCAACATC
TACTTCAACATCTACAACAAGCAGGTTTTGAAGGTTTTTCCATACCCCATAAACATCACA
AATGTCCAGTTTGCTGTCGGCACTGTCATTGCTCTGTTCATGTGGATTACCGGTATCCTT
AAAAGACCAAAGATCTCCGGTGCGCAGCTTGCTGCTATCCTTCCTCTCGCTATGGTCCAC
ACCATGGGCAATCTTTTCACGAACATGAGCCTTGGAAAGGTTGCAGTGTCATTTACACAT
ACTATCAAGGCTATGGAGCCTTTCTTTTCAGTTCTGCTTTCAGCACTTTTCCTCGGAGAG
ATGCCTACTCCTTTTGTTGTATTGTCTCTTGTTCCAATTGTTGGTGGTGTGGCATTGGCA
TCTCTTACTGAAGCTTCATTTAACTGGGCTGGATTTTGGAGTGCAATGGCCTCAAATGTC
ACCTTCCAGTCAAGGAATGTGTTGAGCAAGAAGCTTATGGTGAAGAAGGAGGAATCTCTG
GACAACATTACCCTCTTCTCAATCATTACAGTGATGTCATTCTTCCTCTTGGCCCCAGTA
ACCTTGCTAACAGAGGGTGTCAAAGTCACTCCGACAGTTCTGCAGTCTGCTGGTCTGAAC
TTAAAACAGATATACACAAGGTCACTGATTGCTGCGTTCTGTTTCCATGCATACCAACAG
GTGTCGTACATGATCCTGGCAAGAGTGTCCCCTGTTACTCACTCGGTGGGTAACTGTGTC
AAGCGAGTGGTGGTCATTGTGACATCCGTTCTGTTCTTCCGCACCCCTGTTTCGCCTATC
AACTCTCTGGGAACCGGAGTCGCTCTTGCCGGAGTTTTCCTGTACTCACAATTGAAGCGG
CTTAAACCCAAGCCCAAGACTGCCTGA

Peptide Sequence

PEP ID

Os09t0297400-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:7222188:7225657:-1 gene:Os09g0297400 transcript:Os09t0297400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1 description:Similar to Phosphate/phosphoenolpyruvate translocator. (Os09t0297400-01)
Sequence

MQSAAAVGLLRPCGATTAAAPLQLRNPSPRGFGVGVGQPLLPPRGLRLSAVAPRAGISAR
RIGLVPASPEQEDERRRGARDVAVAATAAAAGEAGAEEGGGLAKTLQLGALFGLWYLFNI
YFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWITGILKRPKISGAQLAAILPLAMVH
TMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGEMPTPFVVLSLVPIVGGVALA
SLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESLDNITLFSIITVMSFFLLAPV
TLLTEGVKVTPTVLQSAGLNLKQIYTRSLIAAFCFHAYQQVSYMILARVSPVTHSVGNCV
KRVVVIVTSVLFFRTPVSPINSLGTGVALAGVFLYSQLKRLKPKPKTA

Transcript Sequence

Transcript ID

Os09t0297400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:7222188:7225657:-1 gene:Os09g0297400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1 description:Similar to Phosphate/phosphoenolpyruvate translocator. (Os09t0297400-01)
Sequence

GCCATCCTCGAGCACTCCGCCGCCGCCGCCGCCGCCGCCTCGACGCATCCGCTTCCCCCC
ACGCGAGCCGAAGCTTCTAGAACCTTCGAGGCCGCGGCTCCCACGGGCGGCAATGCAGAG
CGCGGCGGCCGTCGGGCTCCTCCGGCCATGCGGCGCCACCACCGCCGCCGCCCCGCTCCA
GCTCCGCAACCCTAGCCCCCGGGGCTTCGGCGTCGGAGTCGGGCAGCCGCTGCTCCCGCC
GAGGGGGCTCCGCCTCTCCGCCGTGGCCCCGCGCGCGGGCATCTCCGCCCGGCGCATCGG
GCTCGTGCCGGCCTCCCCGGAGCAGGAGGATGAGCGGCGGCGGGGCGCACGCGACGTGGC
CGTGGCGGCGACAGCGGCGGCGGCGGGTGAGGCAGGGGCGGAGGAGGGTGGAGGGCTCGC
GAAGACGCTGCAGCTCGGCGCGCTCTTCGGGCTGTGGTACCTCTTCAACATCTACTTCAA
CATCTACAACAAGCAGGTTTTGAAGGTTTTTCCATACCCCATAAACATCACAAATGTCCA
GTTTGCTGTCGGCACTGTCATTGCTCTGTTCATGTGGATTACCGGTATCCTTAAAAGACC
AAAGATCTCCGGTGCGCAGCTTGCTGCTATCCTTCCTCTCGCTATGGTCCACACCATGGG
CAATCTTTTCACGAACATGAGCCTTGGAAAGGTTGCAGTGTCATTTACACATACTATCAA
GGCTATGGAGCCTTTCTTTTCAGTTCTGCTTTCAGCACTTTTCCTCGGAGAGATGCCTAC
TCCTTTTGTTGTATTGTCTCTTGTTCCAATTGTTGGTGGTGTGGCATTGGCATCTCTTAC
TGAAGCTTCATTTAACTGGGCTGGATTTTGGAGTGCAATGGCCTCAAATGTCACCTTCCA
GTCAAGGAATGTGTTGAGCAAGAAGCTTATGGTGAAGAAGGAGGAATCTCTGGACAACAT
TACCCTCTTCTCAATCATTACAGTGATGTCATTCTTCCTCTTGGCCCCAGTAACCTTGCT
AACAGAGGGTGTCAAAGTCACTCCGACAGTTCTGCAGTCTGCTGGTCTGAACTTAAAACA
GATATACACAAGGTCACTGATTGCTGCGTTCTGTTTCCATGCATACCAACAGGTGTCGTA
CATGATCCTGGCAAGAGTGTCCCCTGTTACTCACTCGGTGGGTAACTGTGTCAAGCGAGT
GGTGGTCATTGTGACATCCGTTCTGTTCTTCCGCACCCCTGTTTCGCCTATCAACTCTCT
GGGAACCGGAGTCGCTCTTGCCGGAGTTTTCCTGTACTCACAATTGAAGCGGCTTAAACC
CAAGCCCAAGACTGCCTGATTGTGTCTTGGTATCTATCGTGAAGAACCGTAGAAGCATTG
CCACACGCCATCGGAATGAGTGCCTTAGCTTAGAATGATCCTTGGAGAAGCTCCATCCAG
TGAACTGATGCTGCTGTGTGTATCGTTTGTAGTTGAGTTACTAGCGTGCTAATCGTGGCA
AGGTTTTTGTGTCTTCTTTACCACCTTATGCTTGAACAGTCAATTATTTTGTTGTATCAA
TAAATTTCGTGCAATATAACGTTATATTATCTCTGTTTCTTTATGGAAGTATTACTATCC
TTGTATTATAAATTAAAAAGTAAATTTCATAAAACTATAGATATCTTGATC