Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0294000-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:6995066:7005542:-1 gene:Os09g0294000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)]. (Os09t0294000-01);Similar to Aspartate kinase-homoserine dehydrogenase. (Os09t0294000-02)
Sequence	GATACAAGAGAAGTTCTAGTAGTGAAACCTAGTGGTTCTAATCAGGTCGATCCTGACTAT TTGGAATCTGAGAAGCGACTCCAGAAATGGTTTTCACGACAACCAGCAGAGATAATAATC GCTACTGGGTTTATTGCCAGTACAGCCGAAAACATTCCTACTACGCTTAAAAGGGATGGA AGCGACTTCTCAGCATCAATAATTGGATCCCTTGTTAGGGCATGTCAGGTCACTATCTGG ACTGATGTTGATGGGGTATTTAGTGCAGATCCTAGAAAAGTTAGTGAGGCTGTGATCTTA AGCACATTATCTTATCAGGAGGCCTGGGAAATGTCATATTTTGGTGCAAATGTTTTGCAT CCCCGCACCATTATACCTGTGATGAAAGACAATATTCCTATTGTCATTAGGAATATGTTC AATCTATCTGCCCCTGGAACAACAATTTGCAAGCAGCCTGCTAATGAAAATGCTGATTTA GATGCTTGTGTCAAATCATTTGCTACTATAGACAAATTGGCCCTTGTTAATGTGGAAGGA ACTGGAATGGCTGGTGTTCCAGGTACAGCAAGTGCCATATTTAGTGCTGCCAAGGATGTT GGAGCTAATGTTATCATGATATCTCAGGCTAGCAGCGAACACTCGGTATGCTTTGCTGTT CCAGAAAAGGAAGTTGCAGCAGTCTCGACAGCCTTGCATGTTAGGTTTCGTGAGGCATTA GCAGCTGGAAGGCTATCTAAGGTCGAAGTCATTCGTGGGTGCAGCATTCTTGCTGCTGTT GGCTTGAGGATGGCCAGTACTCCTGGAGTCAGTGCAATCCTTTTTGATGCATTAGCAAAG GCAAATATTAATGTACGAGCAATAGCCCAAGGTTGCAGTGAATACAATATTACTGTTGTG TTGAAGCAAGAAGATTGTGTGAGGGCTTTGAGAGCTGTTCATTCAAGGTTCTTCCTCTCC AAAACCACTCTTGCCGTTGGGATCATTGGACCAGGTTTAATTGGTGGAACACTTCTTGAC CAGCTGAAAGATCAGGCTGCTGTTCTCAAGGAAAATATGAATATTGATCTACGTGTTATT GGAATATCTGGCTCAAGAACGATGCATTTGAGTGACATAGGGGTAGACTTAAACCAGTGG AAAGAGCTTCTACGAAAAGAAGCAGAACCAGCAGATCTTGATAGTTTTGTTCGCCATTTG TCTGAAAATCATGTATTTCCAAACAAAGTTTTGGTGGACTGCACAGCAGATACATACGTA GCATGCCACTATTATGATTGGTTGAAGAAGGGTATCCATGTCATCACGCCAAATAAGAAA GCAAATTCTGGTCCGCTTGATCGGTATCTGAAATTAAGGACTCTGCAGCGTGCATCGTAT ACTCATTACTTTTATGAAGCAACTGTTGGTGCTGGCCTTCCAATCATTAGCACCCTACGA GGTCTTCTAGAGACAGGTGACAAGATATTGCGTATTGAGGGCATTTTCAGTGGGACTTTG AGTTATATTTTCAACAATTTTGAAGGTACACGAACTTTTAGTAATGTTGTTGCTGAAGCA AAAGAAGCTGGATATACAGAGCCAGATCCAAGAGATGATCTATCAGGAACTGATGTTGCC AGAAAGGTTATTATCCTTGCAAGGGAGTCTGGTCTGAGGCTCGAGCTTTCCGATATTCCC GTAAAGAGCCTTGTGCCAGAGGCACTGAGGTCATGTTCGTCAGCAGATGAATTCATGCAG AAGCTACCGTCCTTTGATCAGGACTGGGACAGGCAACGCGATGAAGCTGAAGCTGCAGGA GAAGTGCTGCGGTATGTGGGCGTGGTGGACGTGGCGAACAGGAAGGGCCGGGTAGAGCTG CAGAGGTACAAGAGAGACCACCCCTTCGCGCAGCTGTCCGGCTCCGACAACATCATCGCC TTCACCACGTCGAGGTACAAGGAGCAGCCGCTGATCGTGCGAGGCCCCGGCGCCGGCGCG GAGGTCACCGCCGGTGGCGTCTTCTGCGACATCCTGCGGCTGGCGTCCTACCTGGGAGCA CCCTCCTAG

Peptide Sequence

PEP ID	Os09t0294000-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:6995066:7005542:-1 gene:Os09g0294000 transcript:Os09t0294000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)]. (Os09t0294000-01);Similar to Aspartate kinase-homoserine dehydrogenase. (Os09t0294000-02)
Sequence	DTREVLVVKPSGSNQVDPDYLESEKRLQKWFSRQPAEIIIATGFIASTAENIPTTLKRDG SDFSASIIGSLVRACQVTIWTDVDGVFSADPRKVSEAVILSTLSYQEAWEMSYFGANVLH PRTIIPVMKDNIPIVIRNMFNLSAPGTTICKQPANENADLDACVKSFATIDKLALVNVEG TGMAGVPGTASAIFSAAKDVGANVIMISQASSEHSVCFAVPEKEVAAVSTALHVRFREAL AAGRLSKVEVIRGCSILAAVGLRMASTPGVSAILFDALAKANINVRAIAQGCSEYNITVV LKQEDCVRALRAVHSRFFLSKTTLAVGIIGPGLIGGTLLDQLKDQAAVLKENMNIDLRVI GISGSRTMHLSDIGVDLNQWKELLRKEAEPADLDSFVRHLSENHVFPNKVLVDCTADTYV ACHYYDWLKKGIHVITPNKKANSGPLDRYLKLRTLQRASYTHYFYEATVGAGLPIISTLR GLLETGDKILRIEGIFSGTLSYIFNNFEGTRTFSNVVAEAKEAGYTEPDPRDDLSGTDVA RKVIILARESGLRLELSDIPVKSLVPEALRSCSSADEFMQKLPSFDQDWDRQRDEAEAAG EVLRYVGVVDVANRKGRVELQRYKRDHPFAQLSGSDNIIAFTTSRYKEQPLIVRGPGAGA EVTAGGVFCDILRLASYLGAPS

Transcript Sequence

Transcript ID	Os09t0294000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:6995066:7005542:-1 gene:Os09g0294000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)]. (Os09t0294000-01);Similar to Aspartate kinase-homoserine dehydrogenase. (Os09t0294000-02)
Sequence	GGATACAAGAGAAGTTCTAGTAGTGAAACCTAGTGGTTCTAATCAGGTCGATCCTGACTA TTTGGAATCTGAGAAGCGACTCCAGAAATGGTTTTCACGACAACCAGCAGAGATAATAAT CGCTACTGGGTTTATTGCCAGTACAGCCGAAAACATTCCTACTACGCTTAAAAGGGATGG AAGCGACTTCTCAGCATCAATAATTGGATCCCTTGTTAGGGCATGTCAGGTCACTATCTG GACTGATGTTGATGGGGTATTTAGTGCAGATCCTAGAAAAGTTAGTGAGGCTGTGATCTT AAGCACATTATCTTATCAGGAGGCCTGGGAAATGTCATATTTTGGTGCAAATGTTTTGCA TCCCCGCACCATTATACCTGTGATGAAAGACAATATTCCTATTGTCATTAGGAATATGTT CAATCTATCTGCCCCTGGAACAACAATTTGCAAGCAGCCTGCTAATGAAAATGCTGATTT AGATGCTTGTGTCAAATCATTTGCTACTATAGACAAATTGGCCCTTGTTAATGTGGAAGG AACTGGAATGGCTGGTGTTCCAGGTACAGCAAGTGCCATATTTAGTGCTGCCAAGGATGT TGGAGCTAATGTTATCATGATATCTCAGGCTAGCAGCGAACACTCGGTATGCTTTGCTGT TCCAGAAAAGGAAGTTGCAGCAGTCTCGACAGCCTTGCATGTTAGGTTTCGTGAGGCATT AGCAGCTGGAAGGCTATCTAAGGTCGAAGTCATTCGTGGGTGCAGCATTCTTGCTGCTGT TGGCTTGAGGATGGCCAGTACTCCTGGAGTCAGTGCAATCCTTTTTGATGCATTAGCAAA GGCAAATATTAATGTACGAGCAATAGCCCAAGGTTGCAGTGAATACAATATTACTGTTGT GTTGAAGCAAGAAGATTGTGTGAGGGCTTTGAGAGCTGTTCATTCAAGGTTCTTCCTCTC CAAAACCACTCTTGCCGTTGGGATCATTGGACCAGGTTTAATTGGTGGAACACTTCTTGA CCAGCTGAAAGATCAGGCTGCTGTTCTCAAGGAAAATATGAATATTGATCTACGTGTTAT TGGAATATCTGGCTCAAGAACGATGCATTTGAGTGACATAGGGGTAGACTTAAACCAGTG GAAAGAGCTTCTACGAAAAGAAGCAGAACCAGCAGATCTTGATAGTTTTGTTCGCCATTT GTCTGAAAATCATGTATTTCCAAACAAAGTTTTGGTGGACTGCACAGCAGATACATACGT AGCATGCCACTATTATGATTGGTTGAAGAAGGGTATCCATGTCATCACGCCAAATAAGAA AGCAAATTCTGGTCCGCTTGATCGGTATCTGAAATTAAGGACTCTGCAGCGTGCATCGTA TACTCATTACTTTTATGAAGCAACTGTTGGTGCTGGCCTTCCAATCATTAGCACCCTACG AGGTCTTCTAGAGACAGGTGACAAGATATTGCGTATTGAGGGCATTTTCAGTGGGACTTT GAGTTATATTTTCAACAATTTTGAAGGTACACGAACTTTTAGTAATGTTGTTGCTGAAGC AAAAGAAGCTGGATATACAGAGCCAGATCCAAGAGATGATCTATCAGGAACTGATGTTGC CAGAAAGGTTATTATCCTTGCAAGGGAGTCTGGTCTGAGGCTCGAGCTTTCCGATATTCC CGTAAAGAGCCTTGTGCCAGAGGCACTGAGGTCATGTTCGTCAGCAGATGAATTCATGCA GAAGCTACCGTCCTTTGATCAGGACTGGGACAGGCAACGCGATGAAGCTGAAGCTGCAGG AGAAGTGCTGCGGTATGTGGGCGTGGTGGACGTGGCGAACAGGAAGGGCCGGGTAGAGCT GCAGAGGTACAAGAGAGACCACCCCTTCGCGCAGCTGTCCGGCTCCGACAACATCATCGC CTTCACCACGTCGAGGTACAAGGAGCAGCCGCTGATCGTGCGAGGCCCCGGCGCCGGCGC GGAGGTCACCGCCGGTGGCGTCTTCTGCGACATCCTGCGGCTGGCGTCCTACCTGGGAGC ACCCTCCTAGGCTTTAACCTTGAGCGTCCTGCCTTCCTCGACAAAAATTGTCTGGAGGAA GATGAGGCGTATTGATTGTGCCCGACTGGTTATTACATCATATATGGGACTGGTAGTATG CAGTATGTATGTTGTTTCTGAATAAGTGCGAGGAAATAAGGTCTTAGAGGTGCTAGATGG TCCTTGGATCAGGTGTTGTTTTTGCCACACAATCCAGAGCCGCTTGCTATCGAACTGCCA CATTGTATTGGTGATTTGGAGTGATCTAATAATAATGGCTTAAATT