Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0293500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:6954967:6959667:-1 gene:Os09g0293500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRI1 LIKE 1 description:BR receptor kinase, Brassinosteroid (BR) perception in the root (Os09t0293500-01)
Sequence	ATGGCCGCCTCGCCGCCGTTCATGGCGGCCGCGGCGTTCCTTACGCTTGTGGTGGTGCTG TTTCGGGCGCCGGCTCCCGCCATTGCCGTCGGCGAGGAGGCGGCGGCGCTGCTGGCCTTC AGGCGCGCGTCCGTGGCGGACGACCCGGACGGCGCGCTGGCGAGCTGGGTGCTGGGCGCC GGCGGCGCCAACTCCACCGCGCCGTGCTCGTGGGACGGCGTGTCGTGCGCGCCGCCGCCC GACGGCCGCGTCGCCGCCGTCGACCTCAGCGGCATGAGCCTCGCCGGCGAGCTGCGGCTC GACGCGCTCCTCGCGCTCCCGGCGCTGCAGCGCCTCAATCTCCGCGGCAATGCCTTCTAC GGCAACCTCTCGCACGCCGCGCCGTCGCCGCCGTGCGCGCTCGTGGAGGTGGACATCTCG TCGAACGCCTTGAACGGGACGCTGCCGCCGTCGTTCCTGGCGCCGTGCGGCGTGCTGCGG TCCGTGAACCTGTCGAGGAACGGCCTCGCCGGCGGCGGGTTCCCGTTCGCGCCGTCGCTG CGGTCGCTGGACCTGTCGCGCAACCGCCTCGCCGACGCCGGCCTGCTCAACTACTCCTTC GCCGGCTGCCACGGCGTCGGCTACCTCAACCTCTCCGCCAACCTCTTCGCCGGGCGGCTG CCGGAGCTCGCCGCGTGCAGCGCGGTGACCACGCTCGACGTGTCGTGGAACCACATGTCC GGCGGGCTCCCGCCGGGGCTCGTGGCCACCGCGCCGGCCAACCTGACGTACCTCAACATC GCCGGCAACAACTTCACCGGCGATGTCTCCGGCTACGACTTCGGCGGGTGCGCCAACCTC ACGGTGCTCGACTGGTCCTACAATGGCCTAAGTAGCACCAGGTTGCCACCGGGGCTCATC AACTGCCGCCGCCTCGAGACGCTGGAGATGTCCGGGAACAAGCTCCTCTCTGGCGCGCTG CCGACATTCTTGGTCGGCTTCTCGTCGCTGAGGCGGCTGGCATTGGCCGGCAACGAGTTC ACCGGAGCGATTCCGGTGGAGCTGGGGCAATTGTGTGGCAGAATTGTTGAGCTGGACTTA TCCAGCAACCGGCTGGTTGGTGCCTTGCCGGCGAGCTTTGCAAAGTGCAAGTCTCTTGAG GTGCTCGACCTCGGTGGCAACCAGCTCGCCGGCGACTTTGTGGCCAGTGTCGTCAGCACC ATCGCCTCGCTGCGTGAGCTGCGGCTGTCGTTCAACAACATCACCGGTGTAAACCCGCTG CCGGTGCTCGCAGCGGGGTGTCCATTGCTGGAGGTGATTGATCTTGGGTCCAATGAGCTC GATGGGGAGATAATGCCGGATCTTTGCTCGTCGTTGCCATCATTGCGGAAGCTGCTCCTT CCGAACAATTACCTCAATGGCACCGTGCCGCCTTCGCTTGGCGATTGCGCCAATCTGGAG TCCATTGATCTCAGCTTCAATCTGCTGGTTGGCAAGATCCCAACAGAGATAATCAGGCTT CCGAAGATCGTTGATCTGGTCATGTGGGCGAATGGCCTATCCGGTGAGATACCGGATGTT CTCTGCTCCAATGGCACCACATTGGAGACATTGGTGATAAGCTACAACAACTTCACCGGA AGCATTCCAAGATCCATTACAAAGTGTGTGAATCTCATCTGGGTGTCGCTTTCCGGTAAC CGTCTTACCGGGAGCGTGCCCGGTGGATTCGGCAAGCTTCAGAAGCTTGCCATTCTGCAA CTCAACAAGAATCTGCTATCTGGACATGTTCCAGCAGAGCTTGGCAGCTGCAACAACCTC ATCTGGCTTGATCTCAACAGCAACAGCTTCACCGGGACGATACCGCCGCAGTTGGCAGGC CAGGCAGGGCTTGTTCCGGGAGGTATTGTGTCAGGAAAGCAGTTTGCATTTCTCCGGAAT GAGGCTGGCAACATATGCCCTGGTGCCGGTGTTCTCTTTGAGTTCTTTGGCATCAGGCCA GAGCGGTTGGCTGAGTTCCCTGCAGTGCATCTGTGCCCATCCACAAGGATTTACACGGGC ACGACGGTTTATACATTCACCAACAATGGGAGTATGATCTTCCTTGATCTCTCATACAAT GGCCTCACCGGCACAATCCCAGGAAGTCTTGGAAACATGATGTATCTTCAGGTCCTTAAC TTGGGGCACAATGAGCTCAATGGTACAATACCGGATGCATTTCAGAACCTCAAGTCGATC GGCGCACTCGATCTCTCAAACAATCAGCTCAGTGGTGGCATTCCTCCAGGCCTTGGTGGT TTGAATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTGACTGGTCCAATCCCTTCA TCCGGGCAGCTCACCACGTTCCCGCCATCCCGGTACGACAACAACAATGGTCTCTGTGGC ATCCCTTTGCCTCCTTGTGGCCACAATCCCCCATGGGGAGGTAGGCCACGCGGTTCGCCT GATGGGAAGAGGAAGGTGATTGGGGCGAGCATTCTTGTCGGGGTGGCACTCTCCGTGCTC ATACTGCTCCTGCTGCTGGTCACTCTCTGCAAGCTCAGGATGAACCAGAAGACTGAAGAG GTGAGAACTGGGTATGTTGAGAGCCTTCCAACATCTGGAACATCGAGTTGGAAGCTGTCG GGTGTCCGTGAGCCGCTAAGCATCAATGTGGCGACATTCGAGAAGCCGCTGAGGAAGCTC ACATTTGCACACCTCCTTGAGGCCACCAATGGATTCAGTGCTGAGACTCTCATTGGATCA GGGGGATTTGGTGAGGTATACAAGGCCAAGCTCAAGGATGGCAGTGTTGTGGCCATCAAG AAACTGATTCACTTCACTGGCCAAGGTGACCGGGAATTCACTGCAGAGATGGAGACCATT GGAAAGATCAAGCACCGCAACCTTGTCCCATTGCTTGGATATTGCAAGATTGGTGATGAG AGGCTCCTTGTCTACGAGTACATGAAACACGGCAGCCTGGATGTTGTGCTCCATGACAAG GCCAAGGCTAGTGTGAAGCTTGACTGGTCAGCAAGAAAGAAAATTGCAATTGGTTCAGCC AGGGGCCTCGCATTCCTCCACCACAGCTGCATCCCACACATCATACACCGGGACATGAAG TCGAGCAATGTGCTTCTTGACAACAACCTCGATGCCCGTGTATCGGATTTCGGGATGGCA AGGCTGATGAATGCGCTTGATACGCATCTGAGTGTGAGCACACTTGCAGGTACACCTGGG TATGTGCCACCTGAGTACTACCAAAGCTTCAGGTGCACGACCAAAGGCGACGTCTACAGC TATGGTGTTGTGCTCTTGGAGCTCCTCTCAGGTAAGAAGCCAATTGATCCGACTGAGTTT GGAGACAACAACCTTGTTGGTTGGGTGAAGCAGATGGTTAAAGAGAACAGAAGCAGTGAG ATCTTTGATCCTACATTGACTGATAGAAAATCAGGGGAAGCAGAGCTCTATCAGTACCTG AAGATTGCATGCGAGTGCTTGGATGATCGACCCAACCGAAGGCCAACCATGATTCAGGTC ATGGCAATGTTCAAAGAGCTGCAGCTTGACTCGGACAGTGATATCCTCGATGGCTTTTCG ATCAATTCGTCAACTATAGATGAGTCAGGAGAGAAATCAATGTAA

Peptide Sequence

PEP ID	Os09t0293500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:6954967:6959667:-1 gene:Os09g0293500 transcript:Os09t0293500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRI1 LIKE 1 description:BR receptor kinase, Brassinosteroid (BR) perception in the root (Os09t0293500-01)
Sequence	MAASPPFMAAAAFLTLVVVLFRAPAPAIAVGEEAAALLAFRRASVADDPDGALASWVLGA GGANSTAPCSWDGVSCAPPPDGRVAAVDLSGMSLAGELRLDALLALPALQRLNLRGNAFY GNLSHAAPSPPCALVEVDISSNALNGTLPPSFLAPCGVLRSVNLSRNGLAGGGFPFAPSL RSLDLSRNRLADAGLLNYSFAGCHGVGYLNLSANLFAGRLPELAACSAVTTLDVSWNHMS GGLPPGLVATAPANLTYLNIAGNNFTGDVSGYDFGGCANLTVLDWSYNGLSSTRLPPGLI NCRRLETLEMSGNKLLSGALPTFLVGFSSLRRLALAGNEFTGAIPVELGQLCGRIVELDL SSNRLVGALPASFAKCKSLEVLDLGGNQLAGDFVASVVSTIASLRELRLSFNNITGVNPL PVLAAGCPLLEVIDLGSNELDGEIMPDLCSSLPSLRKLLLPNNYLNGTVPPSLGDCANLE SIDLSFNLLVGKIPTEIIRLPKIVDLVMWANGLSGEIPDVLCSNGTTLETLVISYNNFTG SIPRSITKCVNLIWVSLSGNRLTGSVPGGFGKLQKLAILQLNKNLLSGHVPAELGSCNNL IWLDLNSNSFTGTIPPQLAGQAGLVPGGIVSGKQFAFLRNEAGNICPGAGVLFEFFGIRP ERLAEFPAVHLCPSTRIYTGTTVYTFTNNGSMIFLDLSYNGLTGTIPGSLGNMMYLQVLN LGHNELNGTIPDAFQNLKSIGALDLSNNQLSGGIPPGLGGLNFLADFDVSNNNLTGPIPS SGQLTTFPPSRYDNNNGLCGIPLPPCGHNPPWGGRPRGSPDGKRKVIGASILVGVALSVL ILLLLLVTLCKLRMNQKTEEVRTGYVESLPTSGTSSWKLSGVREPLSINVATFEKPLRKL TFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGSVVAIKKLIHFTGQGDREFTAEMETI GKIKHRNLVPLLGYCKIGDERLLVYEYMKHGSLDVVLHDKAKASVKLDWSARKKIAIGSA RGLAFLHHSCIPHIIHRDMKSSNVLLDNNLDARVSDFGMARLMNALDTHLSVSTLAGTPG YVPPEYYQSFRCTTKGDVYSYGVVLLELLSGKKPIDPTEFGDNNLVGWVKQMVKENRSSE IFDPTLTDRKSGEAELYQYLKIACECLDDRPNRRPTMIQVMAMFKELQLDSDSDILDGFS INSSTIDESGEKSM

Transcript Sequence

Transcript ID	Os09t0293500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:6954967:6959667:-1 gene:Os09g0293500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRI1 LIKE 1 description:BR receptor kinase, Brassinosteroid (BR) perception in the root (Os09t0293500-01)
Sequence	CTGCTTTTGTACTAGTAGTAGTAGTAATCTGCTTCTCTCTTCTTCATCTTCTTCTCTTGT CTTCCCTTTTCTTCTAGTCTATCCTCGTTGGCTCAGTTCTTGGAGAGGTTTTTTGTTCGA GTTGTGTGAGAGAGAATTCGTCCATTCTTGATGAGGTTTTGGGTTCTTGGGCACTTCTTG TTCTAGCCAAGAGAAATTGCGATTTGAATACGCTCCATCGATATGTGAAGCCATCCAAGA ACTCGGTGGAAATCAAGAATTCAGAGGCCATCTCGAACGAGCTCACCATCTGCTTGCAAG AATCAGCGAGTGCGAAGTTGACGTAGACGACGAGAAGCCATGGCCGCCTCGCCGCCGTTC ATGGCGGCCGCGGCGTTCCTTACGCTTGTGGTGGTGCTGTTTCGGGCGCCGGCTCCCGCC ATTGCCGTCGGCGAGGAGGCGGCGGCGCTGCTGGCCTTCAGGCGCGCGTCCGTGGCGGAC GACCCGGACGGCGCGCTGGCGAGCTGGGTGCTGGGCGCCGGCGGCGCCAACTCCACCGCG CCGTGCTCGTGGGACGGCGTGTCGTGCGCGCCGCCGCCCGACGGCCGCGTCGCCGCCGTC GACCTCAGCGGCATGAGCCTCGCCGGCGAGCTGCGGCTCGACGCGCTCCTCGCGCTCCCG GCGCTGCAGCGCCTCAATCTCCGCGGCAATGCCTTCTACGGCAACCTCTCGCACGCCGCG CCGTCGCCGCCGTGCGCGCTCGTGGAGGTGGACATCTCGTCGAACGCCTTGAACGGGACG CTGCCGCCGTCGTTCCTGGCGCCGTGCGGCGTGCTGCGGTCCGTGAACCTGTCGAGGAAC GGCCTCGCCGGCGGCGGGTTCCCGTTCGCGCCGTCGCTGCGGTCGCTGGACCTGTCGCGC AACCGCCTCGCCGACGCCGGCCTGCTCAACTACTCCTTCGCCGGCTGCCACGGCGTCGGC TACCTCAACCTCTCCGCCAACCTCTTCGCCGGGCGGCTGCCGGAGCTCGCCGCGTGCAGC GCGGTGACCACGCTCGACGTGTCGTGGAACCACATGTCCGGCGGGCTCCCGCCGGGGCTC GTGGCCACCGCGCCGGCCAACCTGACGTACCTCAACATCGCCGGCAACAACTTCACCGGC GATGTCTCCGGCTACGACTTCGGCGGGTGCGCCAACCTCACGGTGCTCGACTGGTCCTAC AATGGCCTAAGTAGCACCAGGTTGCCACCGGGGCTCATCAACTGCCGCCGCCTCGAGACG CTGGAGATGTCCGGGAACAAGCTCCTCTCTGGCGCGCTGCCGACATTCTTGGTCGGCTTC TCGTCGCTGAGGCGGCTGGCATTGGCCGGCAACGAGTTCACCGGAGCGATTCCGGTGGAG CTGGGGCAATTGTGTGGCAGAATTGTTGAGCTGGACTTATCCAGCAACCGGCTGGTTGGT GCCTTGCCGGCGAGCTTTGCAAAGTGCAAGTCTCTTGAGGTGCTCGACCTCGGTGGCAAC CAGCTCGCCGGCGACTTTGTGGCCAGTGTCGTCAGCACCATCGCCTCGCTGCGTGAGCTG CGGCTGTCGTTCAACAACATCACCGGTGTAAACCCGCTGCCGGTGCTCGCAGCGGGGTGT CCATTGCTGGAGGTGATTGATCTTGGGTCCAATGAGCTCGATGGGGAGATAATGCCGGAT CTTTGCTCGTCGTTGCCATCATTGCGGAAGCTGCTCCTTCCGAACAATTACCTCAATGGC ACCGTGCCGCCTTCGCTTGGCGATTGCGCCAATCTGGAGTCCATTGATCTCAGCTTCAAT CTGCTGGTTGGCAAGATCCCAACAGAGATAATCAGGCTTCCGAAGATCGTTGATCTGGTC ATGTGGGCGAATGGCCTATCCGGTGAGATACCGGATGTTCTCTGCTCCAATGGCACCACA TTGGAGACATTGGTGATAAGCTACAACAACTTCACCGGAAGCATTCCAAGATCCATTACA AAGTGTGTGAATCTCATCTGGGTGTCGCTTTCCGGTAACCGTCTTACCGGGAGCGTGCCC GGTGGATTCGGCAAGCTTCAGAAGCTTGCCATTCTGCAACTCAACAAGAATCTGCTATCT GGACATGTTCCAGCAGAGCTTGGCAGCTGCAACAACCTCATCTGGCTTGATCTCAACAGC AACAGCTTCACCGGGACGATACCGCCGCAGTTGGCAGGCCAGGCAGGGCTTGTTCCGGGA GGTATTGTGTCAGGAAAGCAGTTTGCATTTCTCCGGAATGAGGCTGGCAACATATGCCCT GGTGCCGGTGTTCTCTTTGAGTTCTTTGGCATCAGGCCAGAGCGGTTGGCTGAGTTCCCT GCAGTGCATCTGTGCCCATCCACAAGGATTTACACGGGCACGACGGTTTATACATTCACC AACAATGGGAGTATGATCTTCCTTGATCTCTCATACAATGGCCTCACCGGCACAATCCCA GGAAGTCTTGGAAACATGATGTATCTTCAGGTCCTTAACTTGGGGCACAATGAGCTCAAT GGTACAATACCGGATGCATTTCAGAACCTCAAGTCGATCGGCGCACTCGATCTCTCAAAC AATCAGCTCAGTGGTGGCATTCCTCCAGGCCTTGGTGGTTTGAATTTCCTTGCAGATTTT GATGTCTCCAACAACAACCTGACTGGTCCAATCCCTTCATCCGGGCAGCTCACCACGTTC CCGCCATCCCGGTACGACAACAACAATGGTCTCTGTGGCATCCCTTTGCCTCCTTGTGGC CACAATCCCCCATGGGGAGGTAGGCCACGCGGTTCGCCTGATGGGAAGAGGAAGGTGATT GGGGCGAGCATTCTTGTCGGGGTGGCACTCTCCGTGCTCATACTGCTCCTGCTGCTGGTC ACTCTCTGCAAGCTCAGGATGAACCAGAAGACTGAAGAGGTGAGAACTGGGTATGTTGAG AGCCTTCCAACATCTGGAACATCGAGTTGGAAGCTGTCGGGTGTCCGTGAGCCGCTAAGC ATCAATGTGGCGACATTCGAGAAGCCGCTGAGGAAGCTCACATTTGCACACCTCCTTGAG GCCACCAATGGATTCAGTGCTGAGACTCTCATTGGATCAGGGGGATTTGGTGAGGTATAC AAGGCCAAGCTCAAGGATGGCAGTGTTGTGGCCATCAAGAAACTGATTCACTTCACTGGC CAAGGTGACCGGGAATTCACTGCAGAGATGGAGACCATTGGAAAGATCAAGCACCGCAAC CTTGTCCCATTGCTTGGATATTGCAAGATTGGTGATGAGAGGCTCCTTGTCTACGAGTAC ATGAAACACGGCAGCCTGGATGTTGTGCTCCATGACAAGGCCAAGGCTAGTGTGAAGCTT GACTGGTCAGCAAGAAAGAAAATTGCAATTGGTTCAGCCAGGGGCCTCGCATTCCTCCAC CACAGCTGCATCCCACACATCATACACCGGGACATGAAGTCGAGCAATGTGCTTCTTGAC AACAACCTCGATGCCCGTGTATCGGATTTCGGGATGGCAAGGCTGATGAATGCGCTTGAT ACGCATCTGAGTGTGAGCACACTTGCAGGTACACCTGGGTATGTGCCACCTGAGTACTAC CAAAGCTTCAGGTGCACGACCAAAGGCGACGTCTACAGCTATGGTGTTGTGCTCTTGGAG CTCCTCTCAGGTAAGAAGCCAATTGATCCGACTGAGTTTGGAGACAACAACCTTGTTGGT TGGGTGAAGCAGATGGTTAAAGAGAACAGAAGCAGTGAGATCTTTGATCCTACATTGACT GATAGAAAATCAGGGGAAGCAGAGCTCTATCAGTACCTGAAGATTGCATGCGAGTGCTTG GATGATCGACCCAACCGAAGGCCAACCATGATTCAGGTCATGGCAATGTTCAAAGAGCTG CAGCTTGACTCGGACAGTGATATCCTCGATGGCTTTTCGATCAATTCGTCAACTATAGAT GAGTCAGGAGAGAAATCAATGTAATGCTGTCTAGTTCTTGCAGATTTTGATTATCCGAAG TGGTAAAATATCAGACTAGCTCAACCATTTTGGCTCCATGGTAGAAAAAAAGGTAGTATC CTCCAATTCAGTAGGAAAAGTTGTAATTTTGGTTCAAATCACTGTACATAATACATCAAA GTATGAAGGAGAACACGGTGGTAGGATTTAATTTCAGAAAAAAAAGGCAGTTCTCTTTAC CTGGAGAGACTAGTATGTACCAATCAAATTTCTTGCTTTTGAGCATCAATATTGTCAAGA ATGTAATACATATTAGCTTTCCTT