Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0287000-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:6404482:6406039:-1 gene:Os09g0287000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUBMERGENCE 1B description:Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5). (Os09t0287000-01)
Sequence	ATGTGTGGAGGAGCACTGATCCCGAACGACTATGGCGACAAGCCGCCGCCGCCGCCGTCG GAGTCGTCGGAGTGGGACGCCACAACGAAGATGAAGAAGAAGAAGAAGCGTGGTGGCGGC GGCGACGACGACTGGGAGGCCGCCTTCCGGGAGTTCATCGCTGGCGACGACGACGACGAC GACGGCGGCGTTTCCATGTTCCCTTCTGGTGCAGGGACGATGGAGACGACCACAGAGGTG GCGCCGGCGGCGGCGGTGGTGGAGAGGCCGCGGCGGCGGCGAAGGGTGAGGCGGAGCTAC CCGTACCGCGGCGTCCGGCAGCGGCCGTGGGGGCGGTGGGCGTCGGAGATCCGCGACCCC GTCAAGGGCGCCCGCGTCTGGCTCGGCACCTTCGACACCGCCGTCGAGGCCGCGCGCGCC TACGACGCCGAGGCGCGCCGCATCCACGGCCACAAGGCAAGGACCAACTTCCCGCCCGAC GAGCCTCCGCTGCCGGCGCCATCGCAGGCGCCGTTCTGCTTCCTGCTCGACGACGACGAC GACGACGACGGCGTGGCCCGTGGAAACAGCCCGGCGTCGTCGTCGGCGCCGGACAGAGCC TCCGCTTGCACGACGTCGTCGACGGTGGCGTCCGGCGAGCGAGGCGATGAGCTCATACTG CTGGAGTGCTGCTCCGACGACGTGATGGACAGCCTCCTCGCCGGCTTCGACGTGTCCAGC GAACCACGCAGTGTTTTGGGAATGGTTAATTAG

Peptide Sequence

PEP ID	Os09t0287000-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:6404482:6406039:-1 gene:Os09g0287000 transcript:Os09t0287000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUBMERGENCE 1B description:Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5). (Os09t0287000-01)
Sequence	MCGGALIPNDYGDKPPPPPSESSEWDATTKMKKKKKRGGGGDDDWEAAFREFIAGDDDDD DGGVSMFPSGAGTMETTTEVAPAAAVVERPRRRRRVRRSYPYRGVRQRPWGRWASEIRDP VKGARVWLGTFDTAVEAARAYDAEARRIHGHKARTNFPPDEPPLPAPSQAPFCFLLDDDD DDDGVARGNSPASSSAPDRASACTTSSTVASGERGDELILLECCSDDVMDSLLAGFDVSS EPRSVLGMVN

Transcript Sequence

Transcript ID	Os09t0287000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:6404482:6406039:-1 gene:Os09g0287000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUBMERGENCE 1B description:Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5). (Os09t0287000-01)
Sequence	AGATATTCAGACACACACCTTCAATAACTTGCAAGGATAACTCAAACTACTTGAATCAGA TCAGACAAAAACATCATAAGAATATCACGATGTGTGGAGGAGCACTGATCCCGAACGACT ATGGCGACAAGCCGCCGCCGCCGCCGTCGGAGTCGTCGGAGTGGGACGCCACAACGAAGA TGAAGAAGAAGAAGAAGCGTGGTGGCGGCGGCGACGACGACTGGGAGGCCGCCTTCCGGG AGTTCATCGCTGGCGACGACGACGACGACGACGGCGGCGTTTCCATGTTCCCTTCTGGTG CAGGGACGATGGAGACGACCACAGAGGTGGCGCCGGCGGCGGCGGTGGTGGAGAGGCCGC GGCGGCGGCGAAGGGTGAGGCGGAGCTACCCGTACCGCGGCGTCCGGCAGCGGCCGTGGG GGCGGTGGGCGTCGGAGATCCGCGACCCCGTCAAGGGCGCCCGCGTCTGGCTCGGCACCT TCGACACCGCCGTCGAGGCCGCGCGCGCCTACGACGCCGAGGCGCGCCGCATCCACGGCC ACAAGGCAAGGACCAACTTCCCGCCCGACGAGCCTCCGCTGCCGGCGCCATCGCAGGCGC CGTTCTGCTTCCTGCTCGACGACGACGACGACGACGACGGCGTGGCCCGTGGAAACAGCC CGGCGTCGTCGTCGGCGCCGGACAGAGCCTCCGCTTGCACGACGTCGTCGACGGTGGCGT CCGGCGAGCGAGGCGATGAGCTCATACTGCTGGAGTGCTGCTCCGACGACGTGATGGACA GCCTCCTCGCCGGCTTCGACGTGTCCAGCGAACCACGCAGTGTTTTGGGAATGGTTAATT AGCAGCGCGCACGCCTGATTAGATCGGTACATGTGAAGTACAAGAGAAGTAGTTACTACT AGCTAGGAGCAAATTAACTTGGAGTGCAAGAATAAAATATGCATGTCTCTGCACTACTAC TGTAGTGTTAGCAAGTTTGCTCATTGTTCTGTTGTATCCTTTCATGTCCATTTCAGACTT CCCAATGCTACATAAGGATGTACATATGTATGATGTTGTGTGCCTTGTTAATCAATGAAT GTAAATATCTTTATATTGCTTTTGTAC