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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0282300-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:6066348:6066866:-1 gene:Os09g0282300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type/integrase, DNA-binding domain containing protein. (Os09t0282300-00)
Sequence

ATGGCTAATCCAAGCAAAGATCACATCTTCCCCAACCAAAGAAGCCTAATCTCTCAATCC
TCCTCTCCCCACAATTCCCTTCCTAAAAAGGAGGAAATCCCTCTTCTCAGCCTCCTCCCT
TCAATCCATGATCACAACAAGATCCATGGCTGTTATAAGCAAGAGAAGGAAGAGGAGGTC
ATGGAGGATGTGGACATATCACTCCAAATTGGCCTGCCTTCTCCTGATCCTAACAGCTCG
GTCATCGATTTCGCGAAGAGCAATCCTCTCGGCGCGACCGCGACGACATCACAAGAGCTT
GATGGTGATGATGATGATGATCACAAGGTGGAGGTGGAGAGGGAGGAGGAAGAAGAAGCA
GCTAGTGATGACCTCTGCTTGGACTACTTCTCTATGGGAAAGCTCACCAAGGGCAAGTAT
TGGATCCCTACCCCAACCCAGATCCTCATTGGTCCTACACACTTTGCCTGCCCTGTTTGC
TGCAAGACCTTCAGCAGATACAACAACCTGCAGGTTTGA

Peptide Sequence

PEP ID

Os09t0282300-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:6066348:6066866:-1 gene:Os09g0282300 transcript:Os09t0282300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type/integrase, DNA-binding domain containing protein. (Os09t0282300-00)
Sequence

MANPSKDHIFPNQRSLISQSSSPHNSLPKKEEIPLLSLLPSIHDHNKIHGCYKQEKEEEV
MEDVDISLQIGLPSPDPNSSVIDFAKSNPLGATATTSQELDGDDDDDHKVEVEREEEEEA
ASDDLCLDYFSMGKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQV

Transcript Sequence

Transcript ID

Os09t0282300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:6066348:6066866:-1 gene:Os09g0282300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type/integrase, DNA-binding domain containing protein. (Os09t0282300-00)
Sequence

ATGGCTAATCCAAGCAAAGATCACATCTTCCCCAACCAAAGAAGCCTAATCTCTCAATCC
TCCTCTCCCCACAATTCCCTTCCTAAAAAGGAGGAAATCCCTCTTCTCAGCCTCCTCCCT
TCAATCCATGATCACAACAAGATCCATGGCTGTTATAAGCAAGAGAAGGAAGAGGAGGTC
ATGGAGGATGTGGACATATCACTCCAAATTGGCCTGCCTTCTCCTGATCCTAACAGCTCG
GTCATCGATTTCGCGAAGAGCAATCCTCTCGGCGCGACCGCGACGACATCACAAGAGCTT
GATGGTGATGATGATGATGATCACAAGGTGGAGGTGGAGAGGGAGGAGGAAGAAGAAGCA
GCTAGTGATGACCTCTGCTTGGACTACTTCTCTATGGGAAAGCTCACCAAGGGCAAGTAT
TGGATCCCTACCCCAACCCAGATCCTCATTGGTCCTACACACTTTGCCTGCCCTGTTTGC
TGCAAGACCTTCAGCAGATACAACAACCTGCAGGTTTGA