Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0281300-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:5991204:5996499:-1 gene:Os09g0281300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os09t0281300-02)
Sequence

ATGGGGGACACCGAGAGGAGCTCTATACTGGTCCACATCTTGGTCATCGCCCTCTGCCTC
ACCGCATTCGGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACA
GACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTACTGGCTATGGTGTT
GGTGCATTCCTGTTTCTCCTCTCTGGTCAGTCACTTCTTATGGTAGTTACCAAATGCATG
TGTTTTGGCAAGCCACTTGCACCTGGAGGAAGTAGAGCTTGGTCAATCATATACTTTGCA
TCTTCATGGGTCACATTCATGATCGCGGAGTCGTGCCTGATAGCTGGAGCAACAAAGAAC
GCGTACCACACCAGGTATAGGCATATGGTATACGTGGGGAGCTGGACTTGCGAGTCCCTG
CGCAAAGGAGTTTTTATCGCGGGAGCGGTCTTCGTGGTGTTCACTATGATTCTGAACGTG
TACTTCTACATGTACTACACGAAATCGACAAGCCAGGCTGCCAAAAAGATCAACAAGACT
ACCCCCAATGTCGGTATGACTGGCTACGCATGA

Peptide Sequence

PEP ID

Os09t0281300-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:5991204:5996499:-1 gene:Os09g0281300 transcript:Os09t0281300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os09t0281300-02)
Sequence

MGDTERSSILVHILVIALCLTAFGFAIAAERRRSTGSIVTDSFNSTFCVYDSDIATGYGV
GAFLFLLSGQSLLMVVTKCMCFGKPLAPGGSRAWSIIYFASSWVTFMIAESCLIAGATKN
AYHTRYRHMVYVGSWTCESLRKGVFIAGAVFVVFTMILNVYFYMYYTKSTSQAAKKINKT
TPNVGMTGYA

Transcript Sequence

Transcript ID

Os09t0281300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:5991204:5996499:-1 gene:Os09g0281300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os09t0281300-02)
Sequence

AAGCGCCGCCATTCATCGCTGCTGCGTGGTCGTCGTCGTCGCCGCCGCCGTCGTCCGCCA
TTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTCCTGTAGGACTGAGGAGCAAGCGAAT
CCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTA
TACTGGTCCACATCTTGGTCATCGCCCTCTGCCTCACCGCATTCGGCTTCGCCATCGCCG
CGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACAGACAGCTTCAATTCCACATTTTGTG
TTTATGACTCTGATATTGCTACTGGCTATGGTGTTGGTGCATTCCTGTTTCTCCTCTCTG
GTCAGTCACTTCTTATGGTAGTTACCAAATGCATGTGTTTTGGCAAGCCACTTGCACCTG
GAGGAAGTAGAGCTTGGTCAATCATATACTTTGCATCTTCATGGGTCACATTCATGATCG
CGGAGTCGTGCCTGATAGCTGGAGCAACAAAGAACGCGTACCACACCAGGTATAGGCATA
TGGTATACGTGGGGAGCTGGACTTGCGAGTCCCTGCGCAAAGGAGTTTTTATCGCGGGAG
CGGTCTTCGTGGTGTTCACTATGATTCTGAACGTGTACTTCTACATGTACTACACGAAAT
CGACAAGCCAGGCTGCCAAAAAGATCAACAAGACTACCCCCAATGTCGGTATGACTGGCT
ACGCATGACAATTGGATTTCGGTGCATCCTGGGCAGAAGATTAGTTTTTGGATAACTTGG
CTACGGTGTCATTGTACTATCAGATGCTTCCGAAGAAGCATGTGGTGCAGGGTTGTGCAG
GTTTTGGCCTGTCAGAGCTAATTCTAGTCAGTTTATGGCTGGGTGCCTGGGCCAAGCCCT
ATATTGCTAGGATGGGAGTGATTCGTTTTTGTTTTGTGCTGGTTAGGGTTAAGCACATCA
TGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGAGCAGCTTGGCAGGCTAGCAATTTGG
TGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAG
AGATGAATCTGCTGGTTTCAGTAATTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGG
GGATCTGAGCCAATCTATAAAAATCCTATATTAGTGTGACC