Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0279600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:5874972:5883020:1 gene:Os09g0279600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPOISOMERASE 6 SUBUNIT B description:Similar to Topoisomerase 6 subunit B. (Os09t0279600-01)
Sequence	ATGGACGACGACGCTGGCGACGGCGCCGCTAGCGGCGGGACAAAGAGGAAGGTCACTGCG GCGTCGTCGTCGGCGGCGGCGAAGGGGAAGGCGGCGGGGAAAGGGAAGGCCGCCTCTAAG GCGTCGGCGTTGGCCACGGCCAAGGAGAGCAGCCTCCTCAAGCAGAAGTCGCCTGCTGAA TTCTTCGCGGAGAACAAGAACATCGCGGGGTTTGACAATCCTGGAAAGTCACTGTACACA ACGATGCGGGAGTTAGTTGAGAATGCCCTTGATTCAGCCGAGTCCATCTCTGAGCTCCCT GACATAGAAATTATAATAGAAGAGATCACGAAGAGCAAGTTCAACACAATGATAGGGCTA GTTGATCGACAGCGTATTGATGAAGAGCTCTATGATGACTTTGAATCGGCTAAGGCTCGT GAGAAACGCCTTGCCAAAGAAGCACGCTTCCAAGAAACACAAGCCAAAAATGCTGCTCTT GGGAAGAAGGTTAAGGAGGCTCCAGCTGCTCGAGGGAAAGGTCGGGGTGAGGCTGCATTT TTTAGGGTGACTTGCAAGGATAATGGTCGAGGTATGCCACATGATGATATCCCAAATATG CTTGGTAGAGTGTTATCGGGCACAAAGTATGGTTTGAGGCAAACACGTGGAAAATTTGGT CTTGGTGCTAAAATGGCACTTATATGGTCAAAGATGAGCACAGGCCTTCCTATTGAGATT AAGTCATCAATGAAAGGCCAGAATTTTATTTCATTTTGTCTTCTTGATATCGATATTCAT AAGAATGTCCCTCATGTTCATTTACATGAGAAAAGGGAGAATAAAGATCGCTGGCATGGG GCGGAGCTTCAAGTTATAATTGAGGGGAATTGGACAACTCATCGTTCAAAGATACTACAT TACATGCGTCAGATGGCTGTCATCACACCATACGCTCAATTCCTTTTTAGATTTCTCTCA GACTCACCCGACAAAAATTTGACAATACAGTTTGCACGGAGGACAGATGTTATGCCTCCT ATTCCTCTTCAAACTAAGCATCATCCTTCTGCTGTTGATTTACTGCTGATAAAGCGCTTA ATATCAGAGACTACAAAGCAAAACCTTTTGCAGTTCCTCCAACATGAGTTTGTGAATATT AGCAAATCTCATGCTGAACGTTTGATCGGGGAGATGGGGCCTGATTTCAGTGCAAAAACG ACAGTTAAGAGTCTTACATCACAGCAATTAGTTCGGATACATCAGTTATTTCGGCAGGCA AAATTTGATGATCCCAGTGGCAATTGTCTTAGTCCTGCAGGTGAATACAATTTACGTCTA GGTATCATAAAAGAGCTGCACCCTGATCTAGTTGCTACGCATGCAAGCAGCCCACAGGTT TTTGAAGGTCATCCATTCATCGTTGAAGCTGGAATAAGTATTGGTGGAAAAGATGTTAAA CATGGTCTAAACATTTTTAGATATGCGAACCGAATCCCACTTCTCTTTGAACAAGGTGCT GATGTCATCACAAGAACTGCTTTAAAAAGAATCAATTGGAGCAGCTACAAAATAAATCAA CAGCAGGACAAGATTGGTGTCTTTGTTAGCATTGTAAGTACAAAGATACCTTTTAAAGGA ACTGGAAAAGAGTACATTGGGGATGACATAACCGAAATAGCATCTGCTGTTCAGTCAGCC CTTAAGCAGTGTTGTCTTCAACTGAAGTCAAAGATAGTAAAGAAACTACAGGCTCGTGAA CGGCAGGACAGGAAAAGGAACCTAAACAGATACATTCCTGATGTTGCGAGGGCAATTATG GAGACTCTGGGAGAAATTGCAGATGAGTCTCCCCCAAAGAGGCCACGTTATGATAAGGAA GATGAGGAACTCCTTGAGAAAGTAAACTCTGAGGAGGTGACAGAGATGACCTTTAGGGAT TGCTTAACACAACATGTTGAACAGGTTGATTATGAAATGGCATTGGAGTACGCCATGCAG AGTGGAGTAAGCGAGGAACCTCGTGAAGCATTATATTTAAACTCCCTTGAAGGATCTTAC AAGTTTATCGATTTCCAGAGCCCTGTTTTTGTGTTCAGATTTATTCCTTGA

Peptide Sequence

PEP ID	Os09t0279600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:5874972:5883020:1 gene:Os09g0279600 transcript:Os09t0279600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPOISOMERASE 6 SUBUNIT B description:Similar to Topoisomerase 6 subunit B. (Os09t0279600-01)
Sequence	MDDDAGDGAASGGTKRKVTAASSSAAAKGKAAGKGKAASKASALATAKESSLLKQKSPAE FFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPDIEIIIEEITKSKFNTMIGL VDRQRIDEELYDDFESAKAREKRLAKEARFQETQAKNAALGKKVKEAPAARGKGRGEAAF FRVTCKDNGRGMPHDDIPNMLGRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLPIEI KSSMKGQNFISFCLLDIDIHKNVPHVHLHEKRENKDRWHGAELQVIIEGNWTTHRSKILH YMRQMAVITPYAQFLFRFLSDSPDKNLTIQFARRTDVMPPIPLQTKHHPSAVDLLLIKRL ISETTKQNLLQFLQHEFVNISKSHAERLIGEMGPDFSAKTTVKSLTSQQLVRIHQLFRQA KFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAGISIGGKDVK HGLNIFRYANRIPLLFEQGADVITRTALKRINWSSYKINQQQDKIGVFVSIVSTKIPFKG TGKEYIGDDITEIASAVQSALKQCCLQLKSKIVKKLQARERQDRKRNLNRYIPDVARAIM ETLGEIADESPPKRPRYDKEDEELLEKVNSEEVTEMTFRDCLTQHVEQVDYEMALEYAMQ SGVSEEPREALYLNSLEGSYKFIDFQSPVFVFRFIP

Transcript Sequence

Transcript ID	Os09t0279600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:5874972:5883020:1 gene:Os09g0279600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPOISOMERASE 6 SUBUNIT B description:Similar to Topoisomerase 6 subunit B. (Os09t0279600-01)
Sequence	GCTGAGAGCTCACTCACCTCTCCAATACGCCCAACCCCCACAAAACCCTAGCCCTCGAAT CCCAAATCCCCGACCCCGCGCCATGGACGACGACGCTGGCGACGGCGCCGCTAGCGGCGG GACAAAGAGGAAGGTCACTGCGGCGTCGTCGTCGGCGGCGGCGAAGGGGAAGGCGGCGGG GAAAGGGAAGGCCGCCTCTAAGGCGTCGGCGTTGGCCACGGCCAAGGAGAGCAGCCTCCT CAAGCAGAAGTCGCCTGCTGAATTCTTCGCGGAGAACAAGAACATCGCGGGGTTTGACAA TCCTGGAAAGTCACTGTACACAACGATGCGGGAGTTAGTTGAGAATGCCCTTGATTCAGC CGAGTCCATCTCTGAGCTCCCTGACATAGAAATTATAATAGAAGAGATCACGAAGAGCAA GTTCAACACAATGATAGGGCTAGTTGATCGACAGCGTATTGATGAAGAGCTCTATGATGA CTTTGAATCGGCTAAGGCTCGTGAGAAACGCCTTGCCAAAGAAGCACGCTTCCAAGAAAC ACAAGCCAAAAATGCTGCTCTTGGGAAGAAGGTTAAGGAGGCTCCAGCTGCTCGAGGGAA AGGTCGGGGTGAGGCTGCATTTTTTAGGGTGACTTGCAAGGATAATGGTCGAGGTATGCC ACATGATGATATCCCAAATATGCTTGGTAGAGTGTTATCGGGCACAAAGTATGGTTTGAG GCAAACACGTGGAAAATTTGGTCTTGGTGCTAAAATGGCACTTATATGGTCAAAGATGAG CACAGGCCTTCCTATTGAGATTAAGTCATCAATGAAAGGCCAGAATTTTATTTCATTTTG TCTTCTTGATATCGATATTCATAAGAATGTCCCTCATGTTCATTTACATGAGAAAAGGGA GAATAAAGATCGCTGGCATGGGGCGGAGCTTCAAGTTATAATTGAGGGGAATTGGACAAC TCATCGTTCAAAGATACTACATTACATGCGTCAGATGGCTGTCATCACACCATACGCTCA ATTCCTTTTTAGATTTCTCTCAGACTCACCCGACAAAAATTTGACAATACAGTTTGCACG GAGGACAGATGTTATGCCTCCTATTCCTCTTCAAACTAAGCATCATCCTTCTGCTGTTGA TTTACTGCTGATAAAGCGCTTAATATCAGAGACTACAAAGCAAAACCTTTTGCAGTTCCT CCAACATGAGTTTGTGAATATTAGCAAATCTCATGCTGAACGTTTGATCGGGGAGATGGG GCCTGATTTCAGTGCAAAAACGACAGTTAAGAGTCTTACATCACAGCAATTAGTTCGGAT ACATCAGTTATTTCGGCAGGCAAAATTTGATGATCCCAGTGGCAATTGTCTTAGTCCTGC AGGTGAATACAATTTACGTCTAGGTATCATAAAAGAGCTGCACCCTGATCTAGTTGCTAC GCATGCAAGCAGCCCACAGGTTTTTGAAGGTCATCCATTCATCGTTGAAGCTGGAATAAG TATTGGTGGAAAAGATGTTAAACATGGTCTAAACATTTTTAGATATGCGAACCGAATCCC ACTTCTCTTTGAACAAGGTGCTGATGTCATCACAAGAACTGCTTTAAAAAGAATCAATTG GAGCAGCTACAAAATAAATCAACAGCAGGACAAGATTGGTGTCTTTGTTAGCATTGTAAG TACAAAGATACCTTTTAAAGGAACTGGAAAAGAGTACATTGGGGATGACATAACCGAAAT AGCATCTGCTGTTCAGTCAGCCCTTAAGCAGTGTTGTCTTCAACTGAAGTCAAAGATAGT AAAGAAACTACAGGCTCGTGAACGGCAGGACAGGAAAAGGAACCTAAACAGATACATTCC TGATGTTGCGAGGGCAATTATGGAGACTCTGGGAGAAATTGCAGATGAGTCTCCCCCAAA GAGGCCACGTTATGATAAGGAAGATGAGGAACTCCTTGAGAAAGTAAACTCTGAGGAGGT GACAGAGATGACCTTTAGGGATTGCTTAACACAACATGTTGAACAGGTTGATTATGAAAT GGCATTGGAGTACGCCATGCAGAGTGGAGTAAGCGAGGAACCTCGTGAAGCATTATATTT AAACTCCCTTGAAGGATCTTACAAGTTTATCGATTTCCAGAGCCCTGTTTTTGTGTTCAG ATTTATTCCTTGAGAGTGCAACTTGCATGTCCATCTGTTGCTAGGTTGATTAATATTTAC TTCCCATAATCCCATTGTACTGCGGATGTTTTATGAACCTTTTGCCGATTCAGCAGTCAT GACCGCAAGTTTGTAACTTACACATTATAGATTTTTAGAGTAGTTTAGGTCCATGATATG TTTGTTGCATTCATGGAGATTTTTATTTTTCAATTTTTCTTTAACATATGGGAGTTCACT TCTACCCATTCAATTTTAGGAATAGGAAACATTAGAGAGTGTGTTTGCTGGTATGATTAT AAGTTATACTACATAATTATGTGTTAAATTGATTTAGATCCAAGATATGCTTGC