Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0278700-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:5826160:5827036:1 gene:Os09g0278700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0278700-00)
Sequence

ATGAAGGCCTCGGTGAAGCTCCGGGAGGACGGGGCGGCGCCGCTGCTGCGCGCGAAGCTC
CCCGTGGCGCTCTTCTCCGTGCCCGCCGTCGCCTCCCTCACCGCCGGCGACCCCGCCAAC
CTCCGCCTCTCCCTCGCCACCGCCGCGCCGGCGCTCCCTTCCATCCGCCTCTCCTACGCG
CCCAACCGCGCCACCTCGCCGCTCTCCCTCGCCGTCGTCCTTGGCTCCGGCCCCGGCGGC
TCCCCCTCCTCCTCCGGCGCCGCCGCCTCGGCCATCACCATGGCCGTCGAGGTCAACACC
GCCGGCGCCGTCTCCTTCTCGCTCGCCCTCAAGCCTTCGCTGGGCGACTTCGCCGTGCGC
AAGCGGTTCGACTCCGCCGCCGCCGGAGGCGGAGGTGGCTCAGGTTCTTCGGCTTCGGCG
GCGTCGGAGGTGACGATGAGGAGCGCCATCCCGGTGCGCGGCGGCGCGGCGGCGGTGAGC
GTCAGGTGGGGCGTGAGGATTCCCGCCGAGGTGACCGCCGGCGGGGAGGAGGGCGCGGCG
GCGCTGGCGCTGCGGAGGCTGCCGTTCTTGGTTCTTGGCAAGGTAACGGTCGAGAGGCGG
CCACCGCCACCGCCGGCGAGCACCGCCGAGGAGACGACGACGACGACGGTGGAGAAGACG
AGGAGGGAGAACGAGAGGCTGACGAGGGAGCTGGACGAGCTCCGGGCAGCGGCAACGGAG
AAGACGGAGAGGAAGATGACCTCGGCTGCCGCTGGTCGCCGGAGCAGCGGGTGGAGGTCG
CCGGAGATGGCCGGAGATCGGAAGACCGTTGATTTGGGCCGGTGA

Peptide Sequence

PEP ID

Os09t0278700-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:5826160:5827036:1 gene:Os09g0278700 transcript:Os09t0278700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0278700-00)
Sequence

MKASVKLREDGAAPLLRAKLPVALFSVPAVASLTAGDPANLRLSLATAAPALPSIRLSYA
PNRATSPLSLAVVLGSGPGGSPSSSGAAASAITMAVEVNTAGAVSFSLALKPSLGDFAVR
KRFDSAAAGGGGGSGSSASAASEVTMRSAIPVRGGAAAVSVRWGVRIPAEVTAGGEEGAA
ALALRRLPFLVLGKVTVERRPPPPPASTAEETTTTTVEKTRRENERLTRELDELRAAATE
KTERKMTSAAAGRRSSGWRSPEMAGDRKTVDLGR

Transcript Sequence

Transcript ID

Os09t0278700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:5826160:5827036:1 gene:Os09g0278700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0278700-00)
Sequence

CAGCGTCCGGCGATGCGCCGCTCGGCCACGGAGCCATGAAGGCCTCGGTGAAGCTCCGGG
AGGACGGGGCGGCGCCGCTGCTGCGCGCGAAGCTCCCCGTGGCGCTCTTCTCCGTGCCCG
CCGTCGCCTCCCTCACCGCCGGCGACCCCGCCAACCTCCGCCTCTCCCTCGCCACCGCCG
CGCCGGCGCTCCCTTCCATCCGCCTCTCCTACGCGCCCAACCGCGCCACCTCGCCGCTCT
CCCTCGCCGTCGTCCTTGGCTCCGGCCCCGGCGGCTCCCCCTCCTCCTCCGGCGCCGCCG
CCTCGGCCATCACCATGGCCGTCGAGGTCAACACCGCCGGCGCCGTCTCCTTCTCGCTCG
CCCTCAAGCCTTCGCTGGGCGACTTCGCCGTGCGCAAGCGGTTCGACTCCGCCGCCGCCG
GAGGCGGAGGTGGCTCAGGTTCTTCGGCTTCGGCGGCGTCGGAGGTGACGATGAGGAGCG
CCATCCCGGTGCGCGGCGGCGCGGCGGCGGTGAGCGTCAGGTGGGGCGTGAGGATTCCCG
CCGAGGTGACCGCCGGCGGGGAGGAGGGCGCGGCGGCGCTGGCGCTGCGGAGGCTGCCGT
TCTTGGTTCTTGGCAAGGTAACGGTCGAGAGGCGGCCACCGCCACCGCCGGCGAGCACCG
CCGAGGAGACGACGACGACGACGGTGGAGAAGACGAGGAGGGAGAACGAGAGGCTGACGA
GGGAGCTGGACGAGCTCCGGGCAGCGGCAACGGAGAAGACGGAGAGGAAGATGACCTCGG
CTGCCGCTGGTCGCCGGAGCAGCGGGTGGAGGTCGCCGGAGATGGCCGGAGATCGGAAGA
CCGTTGATTTGGGCCGGTGATTCGTGGCTGTTGGATT