Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0272500-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:5445591:5450231:-1 gene:Os09g0272500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cation cation antiporter. (Os09t0272500-01)
Sequence

ATGGGCATCAGTAAGACTGAAGTGAATCTGCTGCGGTTGCTTGACTCGGCTCCGCGGCAG
CAGAACCAGGCTAAACTCATTCATTATGTCACCACATCGAGGGAACTGTTGGAGAAGCTG
GCAGCGGAAAATACGTCAGAAGGGATATCAAGTATTGCAAAAGGAAGGCTAAATGAGTAT
TCAGAGAGGATTGAGGAACTTGCCGCAAGGCTTGCTTCTCTAGTGCCTGGTTACGAAAAT
GCTGTTGAAGCCATCAGAAAAGAAGAAAGTTACCTTGAAGGGGAACAAATTAGAAGTCCA
ATAGCCTTATCCCCTGGATTGAGGAGGCGATTGACAGCTCTGCAAGAGATTGAACAACCT
ACCAATGCAAAAGAAAGAAATGTTGCAGAACCTCTTAGATTAGATGAAGCAGCCCAGGCA
AACATAGAGAAATATAGGAATCTGCAAGAAGATTTGACTGATGAGATTGTTGAATTAGCA
CGCCAGCTGAAGGATAGCAGTCTTATGATGAACCAGTCTGTGCAAGCAACAGAGAAGATA
CTTGATTCAACTGAAAGGGCTGTGGCATATAGCTTGGCAGGCACTGACCGTGCAAATGCA
CAAGCTGTGGAGGTGTCTTCGTTAACCTCCAAAACAACTTGTTTCCAGTGGTTTCTGCTT
TTTGTAATGACCTGTATGTTCATCATGGTTGTTCTACTTATACGGGTAACCTAA

Peptide Sequence

PEP ID

Os09t0272500-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:5445591:5450231:-1 gene:Os09g0272500 transcript:Os09t0272500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cation cation antiporter. (Os09t0272500-01)
Sequence

MGISKTEVNLLRLLDSAPRQQNQAKLIHYVTTSRELLEKLAAENTSEGISSIAKGRLNEY
SERIEELAARLASLVPGYENAVEAIRKEESYLEGEQIRSPIALSPGLRRRLTALQEIEQP
TNAKERNVAEPLRLDEAAQANIEKYRNLQEDLTDEIVELARQLKDSSLMMNQSVQATEKI
LDSTERAVAYSLAGTDRANAQAVEVSSLTSKTTCFQWFLLFVMTCMFIMVVLLIRVT

Transcript Sequence

Transcript ID

Os09t0272500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:5445591:5450231:-1 gene:Os09g0272500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cation cation antiporter. (Os09t0272500-01)
Sequence

AGTTGCCTTCTCGGCCCATCAGGCCCAGCACCCAAACCGCTGTGCTCCCTTCGTGGCGGC
GACGCCGACGAGGCGTACGCGTCTTCTCCGCCGCCGCCGCCGCCGCCGCCGTCCGTCCGT
CCGTCCGGTCGGCCAGCCGGCAACGGCCACCCGTGAGCGACATCCGCGACCGGCCAGAAC
CGCTTCCTTTGGTAGTCCGTGCCCGACGCCAACAAGCGGAGGAGATATCCCACAATGGGC
ATCAGTAAGACTGAAGTGAATCTGCTGCGGTTGCTTGACTCGGCTCCGCGGCAGCAGAAC
CAGGCTAAACTCATTCATTATGTCACCACATCGAGGGAACTGTTGGAGAAGCTGGCAGCG
GAAAATACGTCAGAAGGGATATCAAGTATTGCAAAAGGAAGGCTAAATGAGTATTCAGAG
AGGATTGAGGAACTTGCCGCAAGGCTTGCTTCTCTAGTGCCTGGTTACGAAAATGCTGTT
GAAGCCATCAGAAAAGAAGAAAGTTACCTTGAAGGGGAACAAATTAGAAGTCCAATAGCC
TTATCCCCTGGATTGAGGAGGCGATTGACAGCTCTGCAAGAGATTGAACAACCTACCAAT
GCAAAAGAAAGAAATGTTGCAGAACCTCTTAGATTAGATGAAGCAGCCCAGGCAAACATA
GAGAAATATAGGAATCTGCAAGAAGATTTGACTGATGAGATTGTTGAATTAGCACGCCAG
CTGAAGGATAGCAGTCTTATGATGAACCAGTCTGTGCAAGCAACAGAGAAGATACTTGAT
TCAACTGAAAGGGCTGTGGCATATAGCTTGGCAGGCACTGACCGTGCAAATGCACAAGCT
GTGGAGGTGTCTTCGTTAACCTCCAAAACAACTTGTTTCCAGTGGTTTCTGCTTTTTGTA
ATGACCTGTATGTTCATCATGGTTGTTCTACTTATACGGGTAACCTAAGGCGTGGCATTC
ACTGAAACAAATGTGACCAGTTACAGTACATTACTGCTCGAAGATAGACCTCCATTACAA
AATGCTGTACTGACTAGTATAAGTGATAGATGCTGCGACTTTCTTTAGTCAGCTAGCTAG
AAGCTGTTAATAAATGAATATAGCAGGCTTTTGGCCATGTATAACCATGCTGACCGAGTT
TGAATTCATTACCTAAAAAAAAATGGATATAGCAGGCAACCGCTGATATGATTTTTTTTC
CCTCATTTTTTTGATGTGCAATGAGTTGTTCGGTGCTCATATTTTTGTAAGCCGCTGATA
TAGCAGGCAGACGCTGATATACTTCTTAACTTCCATTTGATGTATGATCAATGTATATAT
ACTAAATTGCAAGCATATGTGTTGCCTTCAAACGAAAAATGTTTTCT