Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0272300-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:5430895:5433234:1 gene:Os09g0272300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 3-glucanase. (Os09t0272300-01)
Sequence	ATGGGCGCCTTCGCGGCGGCGCTGCTGGCCCTCCTGCTGGCCGCGATGGCCGCGCCCCCG GCGGAGGCGGCGGTCGGGGTGAACTGGGGCACCCTGTCGTCCCACCGCGTCCCGCCGCCG GTGGTGGTGGACCTGCTCCGCGCCAACCGGATCGGGAAGGTCAAGCTCTTCGACGCCGAC CCGGCCGTGCTGCGCGCGCTCGCCGGCAGCGGCCTCCAGGTCATGGTCGGCGTCACCAAC GCCGAGCTCGCCGCCGTCGCGGGATCCCCCGCCGCCGCCGACGCCTGGGTCGCGCAGAAC GTCTCGCGCTACGTCGGCCGCGGCGGCGTCGACATCCGATACATTGCCGTGGGAAATGAG CCGTTCTTGACGAGCTACCAGGGTCAATTCCAGTCATATGTTATTCCAGCAATGACAAAC ATTCAGCAATCGCTGGTGAAGGCTAATCTTGCTAGCTATGTGAAGCTTGTTGTCCCATGC AATGCTGATGCTTATCAGAGTGCTTCTCTCCCATCACAAGGAGTTTTTAGGACTGAACTG ACTCAGATAATGACCCAGCTCGCCGCTTTTCTCAGTTCTAGTGGAGCGCCATTTGTGGTC AATATATACCCTTTTCTCAGTCTTTATCAGAGCTCTGACTTTCCACAAGATTATGCCTTC TTCGAGGGATCTACTCACCCGGTTGTAGATGGTCCTAACACATACTACAATGCTTTTGAT GGCAACTTTGACACATTAGTTGCTGCGCTGGGTAAAATTGGATATGGACAGCTACCGATT GCAATTGGTGAAGTTGGCTGGCCAACTGAAGGAGCACCGAGTGCAAACTTAACTGCAGCA AGGGCATTCAACCAAGGTCTTATGAATCGTGTTATGAACAACAAAGGAACTCCGCTTCGT CCTGGTGTACCTCCAGCTGATGTCTATCTTTTCAGCCTTTTTGATGAAGAGCAAAAGAGC ATACTACCTGGAAACTTTGAGAGACACTGGGGGATCTTCTCATTTGATGGACAAGCCAAG TACCCATTGAATCTTGGTTTAGGGAATCCGGTACTTAAGAATGCTAGAGAGGTGCCATAT CTTCCATCACGGTGGTGCATCGCAAACCCTGCCCAGAATCTTGATAATGTTGCAAATCAC TTAAAGCTTGCTTGCTCTATGGCTGATTGTACCACACTCGACTATGGAGGTTCCTGCTAT GGCATTGGAGAGAAGGCCAACGTTTCTTATGCTTTCAACAGCTACTATCAGCAACAGAAG CAGGATGCTAAGAGTTGCGATTTCGATGGGAATGGGATGATAACTTACCTTGATCCATCC ATGGGCGAGTGTCGCTTTCTTGTTGGAATTGATGATAGTAAAAGCTCTGCAGTTTCCTCC TGTGGCTGCGGTTGTGGGGTTTGTTGTGGGGTGTGGGTTCTATTTTTCTGGGTGTTCATG TACCTTAGAATGATGGGTTCTGTCTGA

Peptide Sequence

PEP ID	Os09t0272300-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:5430895:5433234:1 gene:Os09g0272300 transcript:Os09t0272300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 3-glucanase. (Os09t0272300-01)
Sequence	MGAFAAALLALLLAAMAAPPAEAAVGVNWGTLSSHRVPPPVVVDLLRANRIGKVKLFDAD PAVLRALAGSGLQVMVGVTNAELAAVAGSPAAADAWVAQNVSRYVGRGGVDIRYIAVGNE PFLTSYQGQFQSYVIPAMTNIQQSLVKANLASYVKLVVPCNADAYQSASLPSQGVFRTEL TQIMTQLAAFLSSSGAPFVVNIYPFLSLYQSSDFPQDYAFFEGSTHPVVDGPNTYYNAFD GNFDTLVAALGKIGYGQLPIAIGEVGWPTEGAPSANLTAARAFNQGLMNRVMNNKGTPLR PGVPPADVYLFSLFDEEQKSILPGNFERHWGIFSFDGQAKYPLNLGLGNPVLKNAREVPY LPSRWCIANPAQNLDNVANHLKLACSMADCTTLDYGGSCYGIGEKANVSYAFNSYYQQQK QDAKSCDFDGNGMITYLDPSMGECRFLVGIDDSKSSAVSSCGCGCGVCCGVWVLFFWVFM YLRMMGSV

Transcript Sequence

Transcript ID	Os09t0272300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:5430895:5433234:1 gene:Os09g0272300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 3-glucanase. (Os09t0272300-01)
Sequence	GTTACTAGTGGTACTGGAGTACCTCACTCTCACCACACTCCCTTCGTCCCTTTCTCCTCT CTCACCAACTCAAAGCTCTCGCCGAATCCCACCCAAAGATCCAAACCCTTTTCCATCCAA GAACGCGAGAATCCACCCACCCACCCCGCCGACGCCCGGCGATGGGCGCCTTCGCGGCGG CGCTGCTGGCCCTCCTGCTGGCCGCGATGGCCGCGCCCCCGGCGGAGGCGGCGGTCGGGG TGAACTGGGGCACCCTGTCGTCCCACCGCGTCCCGCCGCCGGTGGTGGTGGACCTGCTCC GCGCCAACCGGATCGGGAAGGTCAAGCTCTTCGACGCCGACCCGGCCGTGCTGCGCGCGC TCGCCGGCAGCGGCCTCCAGGTCATGGTCGGCGTCACCAACGCCGAGCTCGCCGCCGTCG CGGGATCCCCCGCCGCCGCCGACGCCTGGGTCGCGCAGAACGTCTCGCGCTACGTCGGCC GCGGCGGCGTCGACATCCGATACATTGCCGTGGGAAATGAGCCGTTCTTGACGAGCTACC AGGGTCAATTCCAGTCATATGTTATTCCAGCAATGACAAACATTCAGCAATCGCTGGTGA AGGCTAATCTTGCTAGCTATGTGAAGCTTGTTGTCCCATGCAATGCTGATGCTTATCAGA GTGCTTCTCTCCCATCACAAGGAGTTTTTAGGACTGAACTGACTCAGATAATGACCCAGC TCGCCGCTTTTCTCAGTTCTAGTGGAGCGCCATTTGTGGTCAATATATACCCTTTTCTCA GTCTTTATCAGAGCTCTGACTTTCCACAAGATTATGCCTTCTTCGAGGGATCTACTCACC CGGTTGTAGATGGTCCTAACACATACTACAATGCTTTTGATGGCAACTTTGACACATTAG TTGCTGCGCTGGGTAAAATTGGATATGGACAGCTACCGATTGCAATTGGTGAAGTTGGCT GGCCAACTGAAGGAGCACCGAGTGCAAACTTAACTGCAGCAAGGGCATTCAACCAAGGTC TTATGAATCGTGTTATGAACAACAAAGGAACTCCGCTTCGTCCTGGTGTACCTCCAGCTG ATGTCTATCTTTTCAGCCTTTTTGATGAAGAGCAAAAGAGCATACTACCTGGAAACTTTG AGAGACACTGGGGGATCTTCTCATTTGATGGACAAGCCAAGTACCCATTGAATCTTGGTT TAGGGAATCCGGTACTTAAGAATGCTAGAGAGGTGCCATATCTTCCATCACGGTGGTGCA TCGCAAACCCTGCCCAGAATCTTGATAATGTTGCAAATCACTTAAAGCTTGCTTGCTCTA TGGCTGATTGTACCACACTCGACTATGGAGGTTCCTGCTATGGCATTGGAGAGAAGGCCA ACGTTTCTTATGCTTTCAACAGCTACTATCAGCAACAGAAGCAGGATGCTAAGAGTTGCG ATTTCGATGGGAATGGGATGATAACTTACCTTGATCCATCCATGGGCGAGTGTCGCTTTC TTGTTGGAATTGATGATAGTAAAAGCTCTGCAGTTTCCTCCTGTGGCTGCGGTTGTGGGG TTTGTTGTGGGGTGTGGGTTCTATTTTTCTGGGTGTTCATGTACCTTAGAATGATGGGTT CTGTCTGACGTCGAAAATGATCTGTTAGGACACATCGGCATACTTTCTGTGGCCTTGTGT TATAGAAGGTATTCTTCTAGTAGATTTAGGAAACCACGGCATTCTAGCCATATATGAAAA TTAGATTGTGTGAGATTAGGAAAAGAGATTCTAGCCATATATATATGAAAGTTGATTTGT GCTGAAATTTCTCCTGATTCTGAAGAAACATGTTTTTGCCAGC