Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0270900-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:5306896:5308875:-1 gene:Os09g0270900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRON-SULFUR CLUSTER PROTEIN 3 description:BolA-like protein domain containing protein. (Os09t0270900-01);Similar to EMB1374. (Os09t0270900-02)
Sequence	GCGTCCGCCGCCGCCACCTCGTCGTCGGCGTCCCTTCGCCTCCTCACCAAGCCCCCCAAG CCCCTCCTCTCCAAGCCCCACCTCCTCACCCTCTGCGCCCCGGTCTCCTTCCAGCGCCTC GTCGCCAGGTCCAGCGCGTCGCCGACCCCGTCCCCCTCCGCCGCCGCCGCCGCCGCCGCC GCCTCGGGCTCCGGGGTCGATCCGGCGCAGCTTCCCCCGGCGCTGCGCGACATCGTGGCG CTCTTCCAGTCCGTGCCGGACCCGCGCACACGGTACAAGCAGCTCCTCGCCTACGCCGCG CGGCTGCCGCCCATGGACCCGGCGCTCAAGACCGACGCCAACCGCGTCCGGGGATGCGTC TCCCAGGTCTGGGTCCACGCTGCGCCGGAGGAGGGCGGCGCGCCGGGCAGGGTCAGCTTC CAGGCCGACTCCGACGCGCAGCTCACCAAGGGCCTCGCCGCGCTGCTCGTGCTCGGCCTC TCCGGCGCGCCGGCGCGGGATGTCGCCATGGTGCCCGTCGAGTTCATCGAGCTGCTTGGG ATCAGGCAGAGCCTCTCGCCGTCCAGGAACAGCGGCCTGCTCAACATGCTCAGCCTCATG AAGCGCAAGGCCCTGGAGGTTGCCACCGGTGAGGTAACCACTGAGGAAATTGGCAGCCAA GAAGTGGTCCAAGAGGTCGCTGAACGGCCTGCTGCGAAGGAGAAGGAACCCGAGTTTGCG GCTTTCGGTGCGCGAGAAGAAGAGGGTTCAGAGGTGCATAGCCCACAGGAGGAACAATTG GAGGAAATGCCAGCTGATGTGATGGAAGGGAATGGTGGTTTGGGGGGTGGGAGGCAGGAG AGGATAAAGGAGAGCCTTGAGCGCGGGCTTTCGCCGGTGCAGCTCCAGATCGAGGACATA TCGCACCTCCATAAGGGTCATGCTGGGGTGTCAGGAAGCAATGGCGAGACGCATTTTAAT GTTCGGGTGGTCTCAGAGGCGTTTCAGGGGAAGAGCCTGCTCAAGAGGCACAGGGCTGTG TATGATCTTCTGCAAGATGAGCTCAAGAATGGGTTGCATGCGCTCTCCATTGATGCAAAG ACACCATCAGAAGTCTAG

Peptide Sequence

PEP ID	Os09t0270900-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:5306896:5308875:-1 gene:Os09g0270900 transcript:Os09t0270900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRON-SULFUR CLUSTER PROTEIN 3 description:BolA-like protein domain containing protein. (Os09t0270900-01);Similar to EMB1374. (Os09t0270900-02)
Sequence	ASAAATSSSASLRLLTKPPKPLLSKPHLLTLCAPVSFQRLVARSSASPTPSPSAAAAAAA ASGSGVDPAQLPPALRDIVALFQSVPDPRTRYKQLLAYAARLPPMDPALKTDANRVRGCV SQVWVHAAPEEGGAPGRVSFQADSDAQLTKGLAALLVLGLSGAPARDVAMVPVEFIELLG IRQSLSPSRNSGLLNMLSLMKRKALEVATGEVTTEEIGSQEVVQEVAERPAAKEKEPEFA AFGAREEEGSEVHSPQEEQLEEMPADVMEGNGGLGGGRQERIKESLERGLSPVQLQIEDI SHLHKGHAGVSGSNGETHFNVRVVSEAFQGKSLLKRHRAVYDLLQDELKNGLHALSIDAK TPSEV

Transcript Sequence

Transcript ID	Os09t0270900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:5306896:5308875:-1 gene:Os09g0270900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRON-SULFUR CLUSTER PROTEIN 3 description:BolA-like protein domain containing protein. (Os09t0270900-01);Similar to EMB1374. (Os09t0270900-02)
Sequence	TGGCGTCCGCCGCCGCCACCTCGTCGTCGGCGTCCCTTCGCCTCCTCACCAAGCCCCCCA AGCCCCTCCTCTCCAAGCCCCACCTCCTCACCCTCTGCGCCCCGGTCTCCTTCCAGCGCC TCGTCGCCAGGTCCAGCGCGTCGCCGACCCCGTCCCCCTCCGCCGCCGCCGCCGCCGCCG CCGCCTCGGGCTCCGGGGTCGATCCGGCGCAGCTTCCCCCGGCGCTGCGCGACATCGTGG CGCTCTTCCAGTCCGTGCCGGACCCGCGCACACGGTACAAGCAGCTCCTCGCCTACGCCG CGCGGCTGCCGCCCATGGACCCGGCGCTCAAGACCGACGCCAACCGCGTCCGGGGATGCG TCTCCCAGGTCTGGGTCCACGCTGCGCCGGAGGAGGGCGGCGCGCCGGGCAGGGTCAGCT TCCAGGCCGACTCCGACGCGCAGCTCACCAAGGGCCTCGCCGCGCTGCTCGTGCTCGGCC TCTCCGGCGCGCCGGCGCGGGATGTCGCCATGGTGCCCGTCGAGTTCATCGAGCTGCTTG GGATCAGGCAGAGCCTCTCGCCGTCCAGGAACAGCGGCCTGCTCAACATGCTCAGCCTCA TGAAGCGCAAGGCCCTGGAGGTTGCCACCGGTGAGGTAACCACTGAGGAAATTGGCAGCC AAGAAGTGGTCCAAGAGGTCGCTGAACGGCCTGCTGCGAAGGAGAAGGAACCCGAGTTTG CGGCTTTCGGTGCGCGAGAAGAAGAGGGTTCAGAGGTGCATAGCCCACAGGAGGAACAAT TGGAGGAAATGCCAGCTGATGTGATGGAAGGGAATGGTGGTTTGGGGGGTGGGAGGCAGG AGAGGATAAAGGAGAGCCTTGAGCGCGGGCTTTCGCCGGTGCAGCTCCAGATCGAGGACA TATCGCACCTCCATAAGGGTCATGCTGGGGTGTCAGGAAGCAATGGCGAGACGCATTTTA ATGTTCGGGTGGTCTCAGAGGCGTTTCAGGGGAAGAGCCTGCTCAAGAGGCACAGGGCTG TGTATGATCTTCTGCAAGATGAGCTCAAGAATGGGTTGCATGCGCTCTCCATTGATGCAA AGACACCATCAGAAGTCTAGGTATCTGCACGACTGCATATACAGTTAACAGAGACGCCAT AGATGCATTTTTGGTCATGTTATCTTTGTAAGGTTTAGTTTTGGATACATACTGTAGATT TTGAAAGATCAAAGCTTCTCAGTTCTGATAATTTTGTCTTTTTACTGCAATAATTAGTGC CTTAATATTATGGCAGAGATACACATGAATTTTGTCATGCCAGAATAAGAAGGAACGACT TGTTTTATTGAGTTAATATGTATGGCTCACTGATCAATCTTGCATGTTCTATTAGCAAAA AACAGAAAGTGATTAGGCTGTTACTACCTTCCAGCAAACTCAACTAATCTACCCTATTAA TGCTGGTCCCAGCTGAGAAATCATCATGCATGTGTCATTGTTTAGAGTATGAATTCGATG CACATAGGTCATAGGTCATAGCATCTCAATGTTACAAAATGGGCTTGAATTCTTCATGTA GATTTCAAATGCATGACTGGTTGCTTGCTTTTTTTATTAAATGAAGTGTCATTAAAAGTT CTCTATTCATGAAATTCTGTTGGGCACATATTCACTGCACACCTTACTGTTTTGATGTTT TTCTTTGCAATCTGGAGATTAAAGCAGGAATTTCTACCACAAAAAAGTATAGTTTTGCAT ACTGAATCTACATATTTACAGCATATATGGCCATTAGTTTTCACTGTATGAGTTTTGAAT ATTTGAATGCCAGGAGCTGACAGGATACAATGTAGATATATTGGAGTTCACAGCTACCTG GAATGCTTAATTCCTTATGTAATATATAGTTTTCTGTATGCTGCAAATTCTATGTTGTGC ATAAGTTAAACCATGTTGGAATGCTTGTATGGAAACAGTTCTATGCAAAGCTTGGATGTC