Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0267600-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:5104163:5106823:1 gene:Os09g0267600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Copia-like retroelement pol polyprotein description:Similar to Charged multivesicular body protein 4b. (Os09t0267600-01);Similar to Charged multivesicular body protein 4b. (Os09t0267600-02)
Sequence	ATGCTGGAGAAGAAGGAGAAAGTCTTAGAGAAAAAGGCAGCCGCAGAACTGGAGAGGGCT AAGGAGTTCTCAAAAGCAAAGAATAAAAGAGCGGCTATCCAATCCTTGAAGAGAAAAAAG CTTTATGAACAACAAATTGAGCAGCTAGGGAACTTCCAGTTGAGAATTCATGATCAGATG ATCATGTTAGAAGCTGCAAAAGCTACGACAGAAACCGTTGATGCTTTGAGGACTGGAGCT GCAGCTATGAAAGCAATGCAAAAGGCGACAAATATTGATGACGTTGATAAGACTATGGAT GAAATTAATGAACAGACTGAAAACATGAAACAAATACAAGATGCTTTGTCAGCCCCTCTT GGAGCATCTGCTGATTTTGATGAGGACGAACTAGAGGCAGAACTGGAAGAACTGGAGGGA GCAGAATTGGAATCTCAGCTTCTCGAGCCTGTTGCAGCTCCACCTGTGCATCCAGTGCAG GTCCCAGGCACCAGGATACCAACTCGCCCTGCTCCACAGAAAGCATCAGCTGAGGAGGAT GAGCTTGCAGCCTTGCAAGCTGAAATGGCATTGTGA

Peptide Sequence

PEP ID	Os09t0267600-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:5104163:5106823:1 gene:Os09g0267600 transcript:Os09t0267600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Copia-like retroelement pol polyprotein description:Similar to Charged multivesicular body protein 4b. (Os09t0267600-01);Similar to Charged multivesicular body protein 4b. (Os09t0267600-02)
Sequence	MLEKKEKVLEKKAAAELERAKEFSKAKNKRAAIQSLKRKKLYEQQIEQLGNFQLRIHDQM IMLEAAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQIQDALSAPL GASADFDEDELEAELEELEGAELESQLLEPVAAPPVHPVQVPGTRIPTRPAPQKASAEED ELAALQAEMAL

Transcript Sequence

Transcript ID	Os09t0267600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:5104163:5106823:1 gene:Os09g0267600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Copia-like retroelement pol polyprotein description:Similar to Charged multivesicular body protein 4b. (Os09t0267600-01);Similar to Charged multivesicular body protein 4b. (Os09t0267600-02)
Sequence	AGACCCTTGACATGCTGGAGAAGAAGGAGAAAGTCTTAGAGAAAAAGGCAGCCGCAGAAC TGGAGAGGGCTAAGGAGTTCTCAAAAGCAAAGAATAAAAGAGCGGCTATCCAATCCTTGA AGAGAAAAAAGCTTTATGAACAACAAATTGAGCAGCTAGGGAACTTCCAGTTGAGAATTC ATGATCAGATGATCATGTTAGAAGCTGCAAAAGCTACGACAGAAACCGTTGATGCTTTGA GGACTGGAGCTGCAGCTATGAAAGCAATGCAAAAGGCGACAAATATTGATGACGTTGATA AGACTATGGATGAAATTAATGAACAGACTGAAAACATGAAACAAATACAAGATGCTTTGT CAGCCCCTCTTGGAGCATCTGCTGATTTTGATGAGGACGAACTAGAGGCAGAACTGGAAG AACTGGAGGGAGCAGAATTGGAATCTCAGCTTCTCGAGCCTGTTGCAGCTCCACCTGTGC ATCCAGTGCAGGTCCCAGGCACCAGGATACCAACTCGCCCTGCTCCACAGAAAGCATCAG CTGAGGAGGATGAGCTTGCAGCCTTGCAAGCTGAAATGGCATTGTGATCAGGTTCACAAT GAAGAGACGAAATGTACAAATGATTGGCTGTGCTCTACGGAATTTCAACGAGTCTAGCTA CAATATAATTTCCCATGTGTGTACAATCTTTGGGGATAGTCAGCAATCAAAGAGAGATGC TGCTTCAGTCCAGTACTCCAGTGTTCTGTTTTAGTGGCTTGGGGGGTGTCGTCTGTTTTC CATGCACATAATTTAAGTTAATCTGGCACAGTAAGCTCCAAGCTAATCCATAGTCATGCA ATGTGCATTGCTGTCGCACAATATTTTTCATTGACCATGAAGCCGTGTAAAACAAGTTGA AGCGATTGATACGTT