Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0266400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:5006931:5019946:1 gene:Os09g0266400 gene_biotype:protein_coding transcript_biotype:protein_coding description:PGAP1-like family protein. (Os09t0266400-01)
Sequence	ATGGCCGGATTCGGCGGGACGTGCAGGGTGGCAGCGGTGCTCGTCTTCACCGCCTGGATC GCGCTCACGGCGCTCACCCGGCTGCTCCGCCCCGTCCCCAACGGCTGCGTCATGACCTAC ATGTACCCGACCTACATCCCCGTCTCCACCCCCAAGAACGTCTCCTCCGACAGGTACGCC CTCTTCCTCTACCACGAGGGCTGGAAGCAGATCGACTTCCACCACCACCTCAGCAACCTC AACGGTGTCCCGGTTCTCTTCATCCCAGGCAATGGCGGCAGCTACAAGCAGGTCCGATCT CTGGCTGCTGAATCCTTTCGAGCATACCAAAATGGTCCACTTGAGCCTACCTTTTATCGG GAAGCATCTACTGCATTTTCAGTAAATGAACTGGAGGGTTTTTCAATCCCATCAAGATAT GGCCGTATGTTGGATTGGTTTGCTGTTGACCTTGAAGGAGAACACTCTGCAATGGATGGA CGCATACTTGAGGAGCATACTGAATATGTTGTTTACGCCATTCACAGGATCCTTGATCAA TACAAAGAATCTCATTTAGCACGATCAAAGGGTCGTGCTCAATCCTCTGACAACTTGCCA TCCAGTGTAATTTTAGTTGGACATTCCATGGGTGGTTTTGTGGCTCGAGCAGCTCTTGTC CATCCAGGCTTAAGGAAATCGGCTGTGGAAACCATACTGACACTCTCCAGTCCACATCAG TACCCTCCCATTGCTCTGCAGCCATCTCTGGGTCAGTTTTTTTTGCATGTCAATGAAGAA TGGAGAAATGGATACAAGACAGGGTTATCACGCACCAGCAGTGCAAAACTCTCAAATGTT GTTGTTGTCTCTGTAGCTGGAGGCATCCATGATTATCAGGTTAGGTCAAAGTTAGCTTTG CTGGATGGAATTGTACCTTCTACTCATGGTTTTATGGTAGGGAGCTCAAGCATGAAGAAT GTTTGGTTATCCATGGAACATCAGTCTATCCTCTGGTGCAATCAGTTAGTTGTACAGGTT GCACACACACTTCTTAGTATGGTAGATCCTTTGAATGGACAGCCATTTTTGAGTTCACAA AAAAGACTTTTTGTATTTGCAAAAATGCTCCAAAGTGCAGTTCCGCAGTCTTTGAGTTGG GTGGCTCCTGTTTCAGGTGTTAAGCCTCCAAATCTGATTGCAAGTGGTAACAAGGAAGCT AGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCTCCATCTCTTCAATGGACAAGTGAT GGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCAGTTACTGTTTTAGCAATGGATGGC AAGAGAAGATGGTTAGATATTAAAAAACTGGGATCAAATGGCAAAGGGCACTTTGTTTTT GTAAGTAATCTTTCTCCATGTTCTGGGGTGAGGATTCATTTGTGGCCAGAAAAGGATCAT TCATCTGAACAAAATGGAGTACCTGCCAGCAAAAAGATAGTGGAAGTTACATCAAAGATG GTCCAAATACCTGCAGGACCTGCACCAAAACAGGTTGAACCTGGGAGTCAAACCGAGCAA CCACCTCCTACTGCATTTCTTCTGCTTAGTCCAGAAGAAATGAGTGGTTTCCGCTTCATG ACTATCTCAGTGGCACCTCGACCGACAATTTCAGGTAGACCACCTCCAGCGGCATCTATG GCAGTAGGACAGTTCTTTAATCCAGAGGAAGGGACGAGTGCACTTTCTGCTGCCCGAATT ATTGGCTCCAGCTATATTCCTGAAGAAATATTTTTGAAGGAGGACCACCCACTGGCTTTA AACTTGTCGTTTTCTGTGAGCCTTGGTCTTCTACCAGTTATATTATCTTTGAGAACTGCT GGATGTGGAGTAAAAGCTACTGGCGACCAATTGGAAGCTGAGAAAAATAAACTTTGTAAA CTGCGGTGCTTCCCACCTGTTGCTTTGGCTTGGGACCCTGTATCAGGTCTGCACATTATT CCAAATATTTACTCTGAGACTCTAGTGGTTGATTCTTCACCTGCCCTTTGGGATTCACAT CAAGGGACTGAAAGATCTACTGTGCTTGTCCTGGCTGATCCACATTGCTCATATGAAGTG AGTCTTCGTGTTTCACTTAGTGCTGCAGCAAGCAGATTCTTTTTGCTGTACTCATCACAG ATTCTTGGTTTCATGATTGCTGTAATGTTTTTCGGCCTGATGCGGCAATCATCAGCATGG GAACATGATTCTTCTGTGCCGTCTGTTTTGTCAGCTATAGAGTCTAATCTGAGGCTGCCT AGAGCATTCATGTTCCTTTGCTTCATACCAGTTCTTCTTTTTCTTGCCTTTCTTGTTTTC ACCAGAGAGCAAAATCCTCCACTTGGAACCTTCCTGCTAGTTACCATGATGTGCTACATA GTTGCTAATGGCTTCACAATTTTATTGATACTAAGTTCAAAATTGATTCTTTATGTCGCT GCTATTCTTCATGTCTTCATCAAGAGGCGCTGGCAATCATGGGAGGATGGTACTCAATCA ATGATTGTTCGCCACTTCCTCACTCTCTCATTACCATTTCAGTCGCTAAAGATTGTGCAG ATAATTAAAAACAATCCAAGTATAATTGTAGCATTTGCTACAATACCACTTGTCTGCTTA GTTCATCCAGCAATTGGTCTTGGTGTATTACTTCTCTCACATGCCTTCCATGCACACTCC ACCCTTTGCAGTTTCTTAGCAGCTTCATTTCGCAGTATCACTCAGAAAAAGGATTTGTAT AAATCCATGGGTGATAATATTATTCTGCCCGAAAATAAACAAGATGGCCTCGAGCAACTT CTGCCGATGGATGATAGCCCAACATCTGTTAAAAGTTTTACTGACTGCCAATTGGAAGTA TTTGACTGTCGGCATGGGATCATGATCTTGCACCTTCTTGCCACTCTAATGTTTGCACCT TCTCTTGTTGCTTGGCTACAGAGAATCGGAATGGGTCAAAATTTTCCATGGTTTGTGGAT TCAGTACTTTGTGTTGGCACTATTCTGCATGGACTTTTCGGATCACCACCAAATGTGAGC TGTATATCTTTCAAGCTACCTGGAAGGAGAGGGCGAGATGTTGGACTAAGCTTTCTCTAC CTTGTAGCTGGATATTATTCATTTGTTAGCTCAATGGCTCTGGCTCCTTATAGGGCGCTC TATGCATTGGCAATCATCGGTTTCATCTGCTTTGCTTCCAGAATTATTGAAACAAGAAGT ACGGTAAGAGGTGATGTTATTTCTAGAAAACATCGGAAGCATTCATAG

Peptide Sequence

PEP ID	Os09t0266400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:5006931:5019946:1 gene:Os09g0266400 transcript:Os09t0266400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:PGAP1-like family protein. (Os09t0266400-01)
Sequence	MAGFGGTCRVAAVLVFTAWIALTALTRLLRPVPNGCVMTYMYPTYIPVSTPKNVSSDRYA LFLYHEGWKQIDFHHHLSNLNGVPVLFIPGNGGSYKQVRSLAAESFRAYQNGPLEPTFYR EASTAFSVNELEGFSIPSRYGRMLDWFAVDLEGEHSAMDGRILEEHTEYVVYAIHRILDQ YKESHLARSKGRAQSSDNLPSSVILVGHSMGGFVARAALVHPGLRKSAVETILTLSSPHQ YPPIALQPSLGQFFLHVNEEWRNGYKTGLSRTSSAKLSNVVVVSVAGGIHDYQVRSKLAL LDGIVPSTHGFMVGSSSMKNVWLSMEHQSILWCNQLVVQVAHTLLSMVDPLNGQPFLSSQ KRLFVFAKMLQSAVPQSLSWVAPVSGVKPPNLIASGNKEASDLQQKDSLSCPPSLQWTSD GLEKDLHIQLNSVTVLAMDGKRRWLDIKKLGSNGKGHFVFVSNLSPCSGVRIHLWPEKDH SSEQNGVPASKKIVEVTSKMVQIPAGPAPKQVEPGSQTEQPPPTAFLLLSPEEMSGFRFM TISVAPRPTISGRPPPAASMAVGQFFNPEEGTSALSAARIIGSSYIPEEIFLKEDHPLAL NLSFSVSLGLLPVILSLRTAGCGVKATGDQLEAEKNKLCKLRCFPPVALAWDPVSGLHII PNIYSETLVVDSSPALWDSHQGTERSTVLVLADPHCSYEVSLRVSLSAAASRFFLLYSSQ ILGFMIAVMFFGLMRQSSAWEHDSSVPSVLSAIESNLRLPRAFMFLCFIPVLLFLAFLVF TREQNPPLGTFLLVTMMCYIVANGFTILLILSSKLILYVAAILHVFIKRRWQSWEDGTQS MIVRHFLTLSLPFQSLKIVQIIKNNPSIIVAFATIPLVCLVHPAIGLGVLLLSHAFHAHS TLCSFLAASFRSITQKKDLYKSMGDNIILPENKQDGLEQLLPMDDSPTSVKSFTDCQLEV FDCRHGIMILHLLATLMFAPSLVAWLQRIGMGQNFPWFVDSVLCVGTILHGLFGSPPNVS CISFKLPGRRGRDVGLSFLYLVAGYYSFVSSMALAPYRALYALAIIGFICFASRIIETRS TVRGDVISRKHRKHS

Transcript Sequence

Transcript ID	Os09t0266400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:5006931:5019946:1 gene:Os09g0266400 gene_biotype:protein_coding transcript_biotype:protein_coding description:PGAP1-like family protein. (Os09t0266400-01)
Sequence	ACTTGCCCCCTCCCCCCTCGCCGCCGCCGCCGCCGCCGCCTCCTCGGCTCCTCCGCCATC CGCCCATCCCCCTCCATTCCTCCTCGCCCCCCGCGCCCGCAGGTTTTCCTCTCTCCCAAG GCGGCCACCCCAGATCCCGTCCTGTTCGATCCACGCCTCTCCCGCTCAAATCTCGGGGCG GGCCACCGTCTCCGCGGCCGCATGCCGGGATTGGCGCGAGAGCGCATCAGCAGTCGCCGC AGCCGAGCAACCTGATCTTCCCCCATGGCCGGATTCGGCGGGACGTGCAGGGTGGCAGCG GTGCTCGTCTTCACCGCCTGGATCGCGCTCACGGCGCTCACCCGGCTGCTCCGCCCCGTC CCCAACGGCTGCGTCATGACCTACATGTACCCGACCTACATCCCCGTCTCCACCCCCAAG AACGTCTCCTCCGACAGGTACGCCCTCTTCCTCTACCACGAGGGCTGGAAGCAGATCGAC TTCCACCACCACCTCAGCAACCTCAACGGTGTCCCGGTTCTCTTCATCCCAGGCAATGGC GGCAGCTACAAGCAGGTCCGATCTCTGGCTGCTGAATCCTTTCGAGCATACCAAAATGGT CCACTTGAGCCTACCTTTTATCGGGAAGCATCTACTGCATTTTCAGTAAATGAACTGGAG GGTTTTTCAATCCCATCAAGATATGGCCGTATGTTGGATTGGTTTGCTGTTGACCTTGAA GGAGAACACTCTGCAATGGATGGACGCATACTTGAGGAGCATACTGAATATGTTGTTTAC GCCATTCACAGGATCCTTGATCAATACAAAGAATCTCATTTAGCACGATCAAAGGGTCGT GCTCAATCCTCTGACAACTTGCCATCCAGTGTAATTTTAGTTGGACATTCCATGGGTGGT TTTGTGGCTCGAGCAGCTCTTGTCCATCCAGGCTTAAGGAAATCGGCTGTGGAAACCATA CTGACACTCTCCAGTCCACATCAGTACCCTCCCATTGCTCTGCAGCCATCTCTGGGTCAG TTTTTTTTGCATGTCAATGAAGAATGGAGAAATGGATACAAGACAGGGTTATCACGCACC AGCAGTGCAAAACTCTCAAATGTTGTTGTTGTCTCTGTAGCTGGAGGCATCCATGATTAT CAGGTTAGGTCAAAGTTAGCTTTGCTGGATGGAATTGTACCTTCTACTCATGGTTTTATG GTAGGGAGCTCAAGCATGAAGAATGTTTGGTTATCCATGGAACATCAGTCTATCCTCTGG TGCAATCAGTTAGTTGTACAGGTTGCACACACACTTCTTAGTATGGTAGATCCTTTGAAT GGACAGCCATTTTTGAGTTCACAAAAAAGACTTTTTGTATTTGCAAAAATGCTCCAAAGT GCAGTTCCGCAGTCTTTGAGTTGGGTGGCTCCTGTTTCAGGTGTTAAGCCTCCAAATCTG ATTGCAAGTGGTAACAAGGAAGCTAGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCT CCATCTCTTCAATGGACAAGTGATGGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCA GTTACTGTTTTAGCAATGGATGGCAAGAGAAGATGGTTAGATATTAAAAAACTGGGATCA AATGGCAAAGGGCACTTTGTTTTTGTAAGTAATCTTTCTCCATGTTCTGGGGTGAGGATT CATTTGTGGCCAGAAAAGGATCATTCATCTGAACAAAATGGAGTACCTGCCAGCAAAAAG ATAGTGGAAGTTACATCAAAGATGGTCCAAATACCTGCAGGACCTGCACCAAAACAGGTT GAACCTGGGAGTCAAACCGAGCAACCACCTCCTACTGCATTTCTTCTGCTTAGTCCAGAA GAAATGAGTGGTTTCCGCTTCATGACTATCTCAGTGGCACCTCGACCGACAATTTCAGGT AGACCACCTCCAGCGGCATCTATGGCAGTAGGACAGTTCTTTAATCCAGAGGAAGGGACG AGTGCACTTTCTGCTGCCCGAATTATTGGCTCCAGCTATATTCCTGAAGAAATATTTTTG AAGGAGGACCACCCACTGGCTTTAAACTTGTCGTTTTCTGTGAGCCTTGGTCTTCTACCA GTTATATTATCTTTGAGAACTGCTGGATGTGGAGTAAAAGCTACTGGCGACCAATTGGAA GCTGAGAAAAATAAACTTTGTAAACTGCGGTGCTTCCCACCTGTTGCTTTGGCTTGGGAC CCTGTATCAGGTCTGCACATTATTCCAAATATTTACTCTGAGACTCTAGTGGTTGATTCT TCACCTGCCCTTTGGGATTCACATCAAGGGACTGAAAGATCTACTGTGCTTGTCCTGGCT GATCCACATTGCTCATATGAAGTGAGTCTTCGTGTTTCACTTAGTGCTGCAGCAAGCAGA TTCTTTTTGCTGTACTCATCACAGATTCTTGGTTTCATGATTGCTGTAATGTTTTTCGGC CTGATGCGGCAATCATCAGCATGGGAACATGATTCTTCTGTGCCGTCTGTTTTGTCAGCT ATAGAGTCTAATCTGAGGCTGCCTAGAGCATTCATGTTCCTTTGCTTCATACCAGTTCTT CTTTTTCTTGCCTTTCTTGTTTTCACCAGAGAGCAAAATCCTCCACTTGGAACCTTCCTG CTAGTTACCATGATGTGCTACATAGTTGCTAATGGCTTCACAATTTTATTGATACTAAGT TCAAAATTGATTCTTTATGTCGCTGCTATTCTTCATGTCTTCATCAAGAGGCGCTGGCAA TCATGGGAGGATGGTACTCAATCAATGATTGTTCGCCACTTCCTCACTCTCTCATTACCA TTTCAGTCGCTAAAGATTGTGCAGATAATTAAAAACAATCCAAGTATAATTGTAGCATTT GCTACAATACCACTTGTCTGCTTAGTTCATCCAGCAATTGGTCTTGGTGTATTACTTCTC TCACATGCCTTCCATGCACACTCCACCCTTTGCAGTTTCTTAGCAGCTTCATTTCGCAGT ATCACTCAGAAAAAGGATTTGTATAAATCCATGGGTGATAATATTATTCTGCCCGAAAAT AAACAAGATGGCCTCGAGCAACTTCTGCCGATGGATGATAGCCCAACATCTGTTAAAAGT TTTACTGACTGCCAATTGGAAGTATTTGACTGTCGGCATGGGATCATGATCTTGCACCTT CTTGCCACTCTAATGTTTGCACCTTCTCTTGTTGCTTGGCTACAGAGAATCGGAATGGGT CAAAATTTTCCATGGTTTGTGGATTCAGTACTTTGTGTTGGCACTATTCTGCATGGACTT TTCGGATCACCACCAAATGTGAGCTGTATATCTTTCAAGCTACCTGGAAGGAGAGGGCGA GATGTTGGACTAAGCTTTCTCTACCTTGTAGCTGGATATTATTCATTTGTTAGCTCAATG GCTCTGGCTCCTTATAGGGCGCTCTATGCATTGGCAATCATCGGTTTCATCTGCTTTGCT TCCAGAATTATTGAAACAAGAAGTACGGTAAGAGGTGATGTTATTTCTAGAAAACATCGG AAGCATTCATAGGGACTAACAAATGAGAAGTGTATTTTAGATATGAAGTTGGATACATTA GTTTATAATAGCAGATCGTGTTTTGGGGTTTATGGTTGGAAACTGCAAAGCATTGCTCTT GACACTAAGGCCAGTTTTGCGAGGGAAATGAGGGTATATTTTTCTTTTCACTGTTGTGAA GGAGATTTGATGAGTCACTCAGATGATCTGGATATGTTGTATCATAGGTGGGGTTGATTT GGGGGAATTTTAAGCCCATTGTTATGAAAAGACGGAACCAGTAACTGTACATTGTTGAAT GCCGACATGATATAGTGGTTTTTTCATGAATG