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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0266000-03
CDS Infomation

cds chromosome:IRGSP-1.0:9:4989033:4990542:1 gene:Os09g0266000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0266000-01);RNA-directed DNA polymerase (reverse transcriptase), related domain containing protein. (Os09t0266000-02);Similar to predicted protein. (Os09t0266000-03)
Sequence

ATGGCGCTAATCCACCACCACCTCGCCGTTCCAGTGGCTCCCGCTCCTCCTCCTCGGGGT
CTCGGTCCGGCCACCGCCGCCCGGCGGCTGACCCTTCACCGCCGCCGCCGTAGGAGTGGC
GCCGCCGCCGGCAGGATGACAGTCACAGCTTCGTCGATGGTGGAGCCGGCAAGTGGGGAG
GAGACGGCGGCGCGTTCGGCGGCGGACGTGGTGAGGGCGTTCTACGACGGCGTGAACCGG
CGGGACCTGGCGGCGGTGGAGCCGCTCATCGCGGAGGGGTGCGTCTACGAGGACCTCGTC
TTCCCCAACCCCTTCGTCGGCCGCGCCGAGATACTCGGCTTCTTCGCCGGATTCATGGGC
TCCGTCAGCTCCGACCTCCGCTTCGTCATCGACGACATCTCCGCCGGCGACGACTCCCGC
GCCGTCGGCGTCACCTGGCACCTCGATTGGAAGGGGCGGCCATTCCCATTCAGCAGGGGA
TGCAGCTTCTACCGCCTCCAGCTGGACGAGAAGCAGCAGCAGCTGCAGATCGTGTATGGG
CGAGACTGCGTGGAGCCAGCAGTGAAGCCAGGGGAATCCGCGCTGCTCATCATCAGGGCC
GTCACTTGGATCTTCGAACGCTTTCCACGCCTTGCAAACATGCTGTAA

Peptide Sequence

PEP ID

Os09t0266000-03
PEP Infomation

pep chromosome:IRGSP-1.0:9:4989033:4990542:1 gene:Os09g0266000 transcript:Os09t0266000-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0266000-01);RNA-directed DNA polymerase (reverse transcriptase), related domain containing protein. (Os09t0266000-02);Similar to predicted protein. (Os09t0266000-03)
Sequence

MALIHHHLAVPVAPAPPPRGLGPATAARRLTLHRRRRRSGAAAGRMTVTASSMVEPASGE
ETAARSAADVVRAFYDGVNRRDLAAVEPLIAEGCVYEDLVFPNPFVGRAEILGFFAGFMG
SVSSDLRFVIDDISAGDDSRAVGVTWHLDWKGRPFPFSRGCSFYRLQLDEKQQQLQIVYG
RDCVEPAVKPGESALLIIRAVTWIFERFPRLANML

Transcript Sequence

Transcript ID

Os09t0266000-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:4989033:4990542:1 gene:Os09g0266000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0266000-01);RNA-directed DNA polymerase (reverse transcriptase), related domain containing protein. (Os09t0266000-02);Similar to predicted protein. (Os09t0266000-03)
Sequence

GATGGCCACGCATCACCATGGCGCTAATCCACCACCACCTCGCCGTTCCAGTGGCTCCCG
CTCCTCCTCCTCGGGGTCTCGGTCCGGCCACCGCCGCCCGGCGGCTGACCCTTCACCGCC
GCCGCCGTAGGAGTGGCGCCGCCGCCGGCAGGATGACAGTCACAGCTTCGTCGATGGTGG
AGCCGGCAAGTGGGGAGGAGACGGCGGCGCGTTCGGCGGCGGACGTGGTGAGGGCGTTCT
ACGACGGCGTGAACCGGCGGGACCTGGCGGCGGTGGAGCCGCTCATCGCGGAGGGGTGCG
TCTACGAGGACCTCGTCTTCCCCAACCCCTTCGTCGGCCGCGCCGAGATACTCGGCTTCT
TCGCCGGATTCATGGGCTCCGTCAGCTCCGACCTCCGCTTCGTCATCGACGACATCTCCG
CCGGCGACGACTCCCGCGCCGTCGGCGTCACCTGGCACCTCGATTGGAAGGGGCGGCCAT
TCCCATTCAGCAGGGGATGCAGCTTCTACCGCCTCCAGCTGGACGAGAAGCAGCAGCAGC
TGCAGATCGTGTATGGGCGAGACTGCGTGGAGCCAGCAGTGAAGCCAGGGGAATCCGCGC
TGCTCATCATCAGGGCCGTCACTTGGATCTTCGAACGCTTTCCACGCCTTGCAAACATGC
TGTAACTAACTGGCCTTTAATTTTGTATGGTAACTAGTATTTATTTTCTCGTTATGTGCA
CTGTACTTTAGCTTATAAAAGAAATTGAAAGATTGAAGAATTTGG