Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0255400-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:4201661:4204423:-1 gene:Os09g0255400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indole-3-glycerol phosphate synthase description:Similar to Indole-3-glycerol phosphate synthase, chloroplast precursor (EC 4.1.1.48) (IGPS). (Os09t0255400-01);Similar to indole-3-glycerol phosphate synthase. (Os09t0255400-02)
Sequence	ATGGAGTCCCTCCTCGCCGCCTCTTCCTCTCTCCCCGCGGCCGCCTTCTCGCCGCCGTCG TCCCTCTCTTCGACCTCCTCGTCGCCGCACGCCCTACGGTCGGCCGTCGCCGGAGCCGCC CGCGCGGTGCGCTGCTCCGCCGCCAAGGATTCGATCCTGTACGCGCTGGAGCACGACGAG ATGTTTAACTCGGCGGAGGTGATCCAGTGGGAGAGCGGCAAGTCCATCAACTCCATCGCC GCCGCGCAGGGCATCCGCATCCGCCGCCGCTGCCGCCCACGCTACCCCTCCGAGGGCTCC GGCGCCGACAAAGCCGTCCCCCGCAACATGCTCGAGCAGATCATCTGGGACAAAGAGGTC GAGGTGTCCCAGAGGAAGGCGAAGAAGCCGCTGCAGAAGGTGATCGAGTCGAGCCAGCAC GCGCCACCGGCCAGGGACTTCGTCGGCGCGCTAACGGCGGCCTACAGCCGCAACGTCGCG CCGGCGCTGATCGCCGAGGTGAAGAAGGCGTCGCCGAGCAGAGGCGTGCTCCGGGAGGAC TTCAATCCGGTTGAGATCGCGCAATCCTATGAGAAGAACGGCGCGGCTTGCCTCAGTATC CTGACCGACGAAAAACACTTTCAGGGTAGCTTTGAGAATCTCGAGACCGTTCGCAATTCC GGAGTAAAGTGCCCTCTTCTTTGCAAGGAGTTTGTGATAGATATCTGGCAAATCTATTAC GCTCGGTCAAAGGGTGCGGATGCAATTCTGTTGATTGCTGCCGTGTTACCTGATCTCGAC ATCAAGTACATGCTTCGCATCTGCAAGAACCTCGGAATGACAGCTCTCATAGAGGTTCAT GATGAGAGGGAGCTGGATCGTGTGCTCAAAATAGATGGCGTTCAGCTTATCGGCATCAAT AACCGAAGTTTAGAGACGTTTAAGGTTGATACTTCAAACACAAAGACCCTGTTGGAGAAA CGTGGTGACCTCATAAGGGATAAAGGGATTCTGGTTGTTGGTGAATCTGGTCTTTTCACG CCTGATGATGTTGCATACGTGCAGAATGCTGGTGTTTCTGCAGTAAGTTTACTGATTACC CGTTTTCAGCTAAGTTGGTCATACATGTGCTTCAAATTTCCAGCTGAAATATTGTACGGA ACGTCTGAAATGGATTAA

Peptide Sequence

PEP ID	Os09t0255400-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:4201661:4204423:-1 gene:Os09g0255400 transcript:Os09t0255400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indole-3-glycerol phosphate synthase description:Similar to Indole-3-glycerol phosphate synthase, chloroplast precursor (EC 4.1.1.48) (IGPS). (Os09t0255400-01);Similar to indole-3-glycerol phosphate synthase. (Os09t0255400-02)
Sequence	MESLLAASSSLPAAAFSPPSSLSSTSSSPHALRSAVAGAARAVRCSAAKDSILYALEHDE MFNSAEVIQWESGKSINSIAAAQGIRIRRRCRPRYPSEGSGADKAVPRNMLEQIIWDKEV EVSQRKAKKPLQKVIESSQHAPPARDFVGALTAAYSRNVAPALIAEVKKASPSRGVLRED FNPVEIAQSYEKNGAACLSILTDEKHFQGSFENLETVRNSGVKCPLLCKEFVIDIWQIYY ARSKGADAILLIAAVLPDLDIKYMLRICKNLGMTALIEVHDERELDRVLKIDGVQLIGIN NRSLETFKVDTSNTKTLLEKRGDLIRDKGILVVGESGLFTPDDVAYVQNAGVSAVSLLIT RFQLSWSYMCFKFPAEILYGTSEMD

Transcript Sequence

Transcript ID	Os09t0255400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:4201661:4204423:-1 gene:Os09g0255400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indole-3-glycerol phosphate synthase description:Similar to Indole-3-glycerol phosphate synthase, chloroplast precursor (EC 4.1.1.48) (IGPS). (Os09t0255400-01);Similar to indole-3-glycerol phosphate synthase. (Os09t0255400-02)
Sequence	ACTTGTCTCGCTTCCTCCTCCGACTCGCCTCTTCCCACCAACTCCTTCCCCGATGGAGTC CCTCCTCGCCGCCTCTTCCTCTCTCCCCGCGGCCGCCTTCTCGCCGCCGTCGTCCCTCTC TTCGACCTCCTCGTCGCCGCACGCCCTACGGTCGGCCGTCGCCGGAGCCGCCCGCGCGGT GCGCTGCTCCGCCGCCAAGGATTCGATCCTGTACGCGCTGGAGCACGACGAGATGTTTAA CTCGGCGGAGGTGATCCAGTGGGAGAGCGGCAAGTCCATCAACTCCATCGCCGCCGCGCA GGGCATCCGCATCCGCCGCCGCTGCCGCCCACGCTACCCCTCCGAGGGCTCCGGCGCCGA CAAAGCCGTCCCCCGCAACATGCTCGAGCAGATCATCTGGGACAAAGAGGTCGAGGTGTC CCAGAGGAAGGCGAAGAAGCCGCTGCAGAAGGTGATCGAGTCGAGCCAGCACGCGCCACC GGCCAGGGACTTCGTCGGCGCGCTAACGGCGGCCTACAGCCGCAACGTCGCGCCGGCGCT GATCGCCGAGGTGAAGAAGGCGTCGCCGAGCAGAGGCGTGCTCCGGGAGGACTTCAATCC GGTTGAGATCGCGCAATCCTATGAGAAGAACGGCGCGGCTTGCCTCAGTATCCTGACCGA CGAAAAACACTTTCAGGGTAGCTTTGAGAATCTCGAGACCGTTCGCAATTCCGGAGTAAA GTGCCCTCTTCTTTGCAAGGAGTTTGTGATAGATATCTGGCAAATCTATTACGCTCGGTC AAAGGGTGCGGATGCAATTCTGTTGATTGCTGCCGTGTTACCTGATCTCGACATCAAGTA CATGCTTCGCATCTGCAAGAACCTCGGAATGACAGCTCTCATAGAGGTTCATGATGAGAG GGAGCTGGATCGTGTGCTCAAAATAGATGGCGTTCAGCTTATCGGCATCAATAACCGAAG TTTAGAGACGTTTAAGGTTGATACTTCAAACACAAAGACCCTGTTGGAGAAACGTGGTGA CCTCATAAGGGATAAAGGGATTCTGGTTGTTGGTGAATCTGGTCTTTTCACGCCTGATGA TGTTGCATACGTGCAGAATGCTGGTGTTTCTGCAGTAAGTTTACTGATTACCCGTTTTCA GCTAAGTTGGTCATACATGTGCTTCAAATTTCCAGCTGAAATATTGTACGGAACGTCTGA AATGGATTAAGAATATCTGTAATTGGACTTAATATTTATCCACGATATAACAAATAACAC TAATTCTGGG