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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0252000-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:3959991:3964671:1 gene:Os09g0252000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Exosome complex exonuclease RRP41. (Os09t0252000-00)
Sequence

ATGGAGTACGTGAACCCTCTCACCGGCTTCCGCGTCGACGGCCGGCGCCCCAACGAGATG
CGGCAGCTCAAGGGCGAGGTGGGCGTCGTCGCCAGGGCAGACGGATCGGCGCTGTTCGAG
ATGGGCAACACCAGGGTCATTGCCGCTGTCTACGGCCCTCGAGAGGTCCAGAACAAAGGT
CAGCAAGTCAACAGCAAAGATGCTTTGGTGCGTTGTGAGTATAGGATGGCAGATTTTAGT
ACTGGGGATCGAAGGAGAAAGCCAAAGGGTGACAGGCGATCAACAGAAATTTCACTTGTT
ATCCGGCAAACAATGGAGGCAAGCATTTTAACACATTTAATGCCACGTTCACAGATTGAT
ATATTTGTCCAAGTTCTTCAAGCTGATGGTGGTACAAGGGCTGCATGCATCAATGCTGCT
ACATTAGCACTTGCAGATGCTGGGATTCCCATGCGAGACATTGTTACATCTTGCAGTGCT
GGTTATCTGTGTTCTACTCCTTTGCTTGATCTGAATTATATAGAAGACAGTGCTGGAGGT
CCAGATGTCACTGTTGGCTTTCTTACAAAGATGGACAAAGTTACTCTTCTGCAGATGGAT
GCAAAATTACCAATGGATACATTTGAAACTGTAATGGACCTTGCAATTGAAGGCTGCAAA
GCTATCGCAAACTACATCCGAGAGGTGCTATTGGAGAACACAAGACGGCTGGAGTGCCAG
CGTGGTTAG

Peptide Sequence

PEP ID

Os09t0252000-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:3959991:3964671:1 gene:Os09g0252000 transcript:Os09t0252000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Exosome complex exonuclease RRP41. (Os09t0252000-00)
Sequence

MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG
QQVNSKDALVRCEYRMADFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPRSQID
IFVQVLQADGGTRAACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGG
PDVTVGFLTKMDKVTLLQMDAKLPMDTFETVMDLAIEGCKAIANYIREVLLENTRRLECQ
RG

Transcript Sequence

Transcript ID

Os09t0252000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:3959991:3964671:1 gene:Os09g0252000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Exosome complex exonuclease RRP41. (Os09t0252000-00)
Sequence

TCCGGCGATGGAGTACGTGAACCCTCTCACCGGCTTCCGCGTCGACGGCCGGCGCCCCAA
CGAGATGCGGCAGCTCAAGGGCGAGGTGGGCGTCGTCGCCAGGGCAGACGGATCGGCGCT
GTTCGAGATGGGCAACACCAGGGTCATTGCCGCTGTCTACGGCCCTCGAGAGGTCCAGAA
CAAAGGTCAGCAAGTCAACAGCAAAGATGCTTTGGTGCGTTGTGAGTATAGGATGGCAGA
TTTTAGTACTGGGGATCGAAGGAGAAAGCCAAAGGGTGACAGGCGATCAACAGAAATTTC
ACTTGTTATCCGGCAAACAATGGAGGCAAGCATTTTAACACATTTAATGCCACGTTCACA
GATTGATATATTTGTCCAAGTTCTTCAAGCTGATGGTGGTACAAGGGCTGCATGCATCAA
TGCTGCTACATTAGCACTTGCAGATGCTGGGATTCCCATGCGAGACATTGTTACATCTTG
CAGTGCTGGTTATCTGTGTTCTACTCCTTTGCTTGATCTGAATTATATAGAAGACAGTGC
TGGAGGTCCAGATGTCACTGTTGGCTTTCTTACAAAGATGGACAAAGTTACTCTTCTGCA
GATGGATGCAAAATTACCAATGGATACATTTGAAACTGTAATGGACCTTGCAATTGAAGG
CTGCAAAGCTATCGCAAACTACATCCGAGAGGTGCTATTGGAGAACACAAGACGGCTGGA
GTGCCAGCGTGGTTAGTTAACGCTAGTAGGTGATGCCCTTCAA