Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0248200-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:3656769:3665366:-1 gene:Os09g0248200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ABI3-interacting protein 2. (Os09t0248200-01);Frigida-like family protein. (Os09t0248200-02);Similar to ABI3-interacting protein 2. (Os09t0248200-03)
Sequence	ATGTCCGACATGGAGTCCATGGCTACACTTATGGAGTCCACAGGCTCCAAGCTGCAGCAG CTTCAGCGTGCATTTGCAGAGCTCGAGAGCCAGAGCGCTGTTTCCTTGAACTTAAAGTGG AAGCAACTGGAGGACCATTTCCATGGGCTTGAGCAGTCGCTCAAGAAAAAGTTTGATGAT CTGAAAAGGCAGGAAGAGGAGTTCGAGGAGACGGTTGCAAAGTCAGAGCAGATGCTGGAG CAACAAGAGGCTGTTGTCGTGGCAAAGGAACTGACTTCTCTTGAAAAACTGCAGCAGAAA AGGGATGCCGCGTTGGCTGTGATCTTTGGCAAGTCCAAGCTGAACTTGTCTACGCCTCTT ATCAACCCAATCAGCAAATCCGTGAATAACAATGCTGTGTTTAATGGAAACATCGGTGGT AGTCTTTCTGTTAAGTGGCCCAAACCTGCAACTGCGCATGGTGCATACCTGCAAGATGAA AACACTGCTGTGAAGCCTCGTTCTCAACTTGTTGTCCTCTGTGAAGAGATGAATGTTAAC GGGCTTCATAAGTTCATATCAGACAATCGCAAAGACTTAACATCCATCCGTGAGGAAATC CCCGTTGCACTTAGGGGAGCAACTGATCCATATGGCTTGGTGTTAGCTTCTCTAGAAGAC TTCTATTTTGGAGACAATCTTATATTGGATGGCAAAAAGGATGGAAACCTTCTGGGTGTA CGGAGGACGTGCCTCATGTTGATGGAATCACTTGCTCAGCTGCAAACTGATGCTACTACT GGTTTCATATCGGAAGGTCAAGTGCTTACTGCAAGTATCAAGGAGCGTGCAAAAAAGATT GCTCTTGAGTGGAAATCCAAGTTGGATAGCCTTGACTTTGATGCTAGCAATGGGAACTGC CTGGAAGCACATGCGTTTCTTCAACTCCTGGCTACCTTTGGTATATTTGCTGAATTTGCA CAAGATGAGCTGTGTAAGCTACTTCCCTCAGTCAGTCGTCGTCGTCAGACACCTGAGCTT TGTAGAATACTTGGATTGTCCCAGAACATGCCAGGTGTCATTGGAGTTCTGGTTGAAAAT GGGAGAACTATTGATGCAATTAATTTGGCTTATGCATTTGAGCTGACTAATCAGTTTGAA CCGGTGGAATTACTGAAAGCCTATCTACAGGAGGTCAAGAGTGTGCCACATTTCAAGACT GGAAAGATATCTCTGCAAGTACAGAATGAAATGAATGAACGAGAGCTGTCTGCCTTGAAA GCTGCTATTAAGTGTATCGAGGAGCACAAACTTGATGAGAAATATCCGATTGACCTGCTT CAGAAAAGAGTTATCCAGCTAGAGAAAGCTAAGGCAGACAAGAGGAGGGCTGTTGAAGCT GCAAAGCCACAGTCTAAGAGGCCTCGTGCCAATGGATCCGTATATGCGCCACATACTAGC TTTCCTGACAAAAGCTTCTACCAGGCTGCTCCGCCGCAGAGGCATTCCTACCCTTACGAG AGGCAGTATGTGTATGGTGCTGAGGCCCATCACCATCCCACAATGATAAGCTCAGCTCCC TATGGCATCTCACCTGCCCACACAACATATTATGAGAAGGATGGGGAACCTAATCGTGGA TGA

Peptide Sequence

PEP ID	Os09t0248200-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:3656769:3665366:-1 gene:Os09g0248200 transcript:Os09t0248200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ABI3-interacting protein 2. (Os09t0248200-01);Frigida-like family protein. (Os09t0248200-02);Similar to ABI3-interacting protein 2. (Os09t0248200-03)
Sequence	MSDMESMATLMESTGSKLQQLQRAFAELESQSAVSLNLKWKQLEDHFHGLEQSLKKKFDD LKRQEEEFEETVAKSEQMLEQQEAVVVAKELTSLEKLQQKRDAALAVIFGKSKLNLSTPL INPISKSVNNNAVFNGNIGGSLSVKWPKPATAHGAYLQDENTAVKPRSQLVVLCEEMNVN GLHKFISDNRKDLTSIREEIPVALRGATDPYGLVLASLEDFYFGDNLILDGKKDGNLLGV RRTCLMLMESLAQLQTDATTGFISEGQVLTASIKERAKKIALEWKSKLDSLDFDASNGNC LEAHAFLQLLATFGIFAEFAQDELCKLLPSVSRRRQTPELCRILGLSQNMPGVIGVLVEN GRTIDAINLAYAFELTNQFEPVELLKAYLQEVKSVPHFKTGKISLQVQNEMNERELSALK AAIKCIEEHKLDEKYPIDLLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSVYAPHTS FPDKSFYQAAPPQRHSYPYERQYVYGAEAHHHPTMISSAPYGISPAHTTYYEKDGEPNRG

Transcript Sequence

Transcript ID	Os09t0248200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:3656769:3665366:-1 gene:Os09g0248200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ABI3-interacting protein 2. (Os09t0248200-01);Frigida-like family protein. (Os09t0248200-02);Similar to ABI3-interacting protein 2. (Os09t0248200-03)
Sequence	GAAAAGCAGACAGACGCCCACAACCCACCACCACGTCTAGGGTTCCGCCGCTCCTCCGGC CGCCGCCGCCGCCGCCGCCGACCCCCCTCGATCTCCTCCCCGAGCCGCCATAGGTGGTGG CGGGGGCGGGGGAGCTAGCATCCGTCCGTCAACGCACATCGTCACTGCTGCTTCCTGAAA TCTGCCACCATGTCCGACATGGAGTCCATGGCTACACTTATGGAGTCCACAGGCTCCAAG CTGCAGCAGCTTCAGCGTGCATTTGCAGAGCTCGAGAGCCAGAGCGCTGTTTCCTTGAAC TTAAAGTGGAAGCAACTGGAGGACCATTTCCATGGGCTTGAGCAGTCGCTCAAGAAAAAG TTTGATGATCTGAAAAGGCAGGAAGAGGAGTTCGAGGAGACGGTTGCAAAGTCAGAGCAG ATGCTGGAGCAACAAGAGGCTGTTGTCGTGGCAAAGGAACTGACTTCTCTTGAAAAACTG CAGCAGAAAAGGGATGCCGCGTTGGCTGTGATCTTTGGCAAGTCCAAGCTGAACTTGTCT ACGCCTCTTATCAACCCAATCAGCAAATCCGTGAATAACAATGCTGTGTTTAATGGAAAC ATCGGTGGTAGTCTTTCTGTTAAGTGGCCCAAACCTGCAACTGCGCATGGTGCATACCTG CAAGATGAAAACACTGCTGTGAAGCCTCGTTCTCAACTTGTTGTCCTCTGTGAAGAGATG AATGTTAACGGGCTTCATAAGTTCATATCAGACAATCGCAAAGACTTAACATCCATCCGT GAGGAAATCCCCGTTGCACTTAGGGGAGCAACTGATCCATATGGCTTGGTGTTAGCTTCT CTAGAAGACTTCTATTTTGGAGACAATCTTATATTGGATGGCAAAAAGGATGGAAACCTT CTGGGTGTACGGAGGACGTGCCTCATGTTGATGGAATCACTTGCTCAGCTGCAAACTGAT GCTACTACTGGTTTCATATCGGAAGGTCAAGTGCTTACTGCAAGTATCAAGGAGCGTGCA AAAAAGATTGCTCTTGAGTGGAAATCCAAGTTGGATAGCCTTGACTTTGATGCTAGCAAT GGGAACTGCCTGGAAGCACATGCGTTTCTTCAACTCCTGGCTACCTTTGGTATATTTGCT GAATTTGCACAAGATGAGCTGTGTAAGCTACTTCCCTCAGTCAGTCGTCGTCGTCAGACA CCTGAGCTTTGTAGAATACTTGGATTGTCCCAGAACATGCCAGGTGTCATTGGAGTTCTG GTTGAAAATGGGAGAACTATTGATGCAATTAATTTGGCTTATGCATTTGAGCTGACTAAT CAGTTTGAACCGGTGGAATTACTGAAAGCCTATCTACAGGAGGTCAAGAGTGTGCCACAT TTCAAGACTGGAAAGATATCTCTGCAAGTACAGAATGAAATGAATGAACGAGAGCTGTCT GCCTTGAAAGCTGCTATTAAGTGTATCGAGGAGCACAAACTTGATGAGAAATATCCGATT GACCTGCTTCAGAAAAGAGTTATCCAGCTAGAGAAAGCTAAGGCAGACAAGAGGAGGGCT GTTGAAGCTGCAAAGCCACAGTCTAAGAGGCCTCGTGCCAATGGATCCGTATATGCGCCA CATACTAGCTTTCCTGACAAAAGCTTCTACCAGGCTGCTCCGCCGCAGAGGCATTCCTAC CCTTACGAGAGGCAGTATGTGTATGGTGCTGAGGCCCATCACCATCCCACAATGATAAGC TCAGCTCCCTATGGCATCTCACCTGCCCACACAACATATTATGAGAAGGATGGGGAACCT AATCGTGGATGATGGATCCTCTGTGATTTGTGTTCATGATGAGTGATGACTGATAAGTGC GTATGCAAGGGCCCACAAATCAATCATGCAATTAGGTATGGGAAAAATAGGGAGTGAGCT TGATAATGTTGAGAGCAACTGGATGCATGAAATTCCAATCCTAGCTAACCAACCAACTTT GTCGGTGGAATCGGTACCACGTGTTTTCTTAGTCATCTTGGGCCCACCACTGGGCTTAGC TGTTCTTCAGTGACCTGGCACCCAACGGCATGCATGTGTGGATTTTGGAATTTCTAGTTG TATATGCATCGCGCGCATGACAAAACTTTGTC