Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0248100-03
CDS Infomation	cds chromosome:IRGSP-1.0:9:3655064:3658609:1 gene:Os09g0248100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 description:FAS1 domain domain containing protein. (Os09t0248100-01);FAS1 domain domain containing protein. (Os09t0248100-02);FAS1 domain domain containing protein. (Os09t0248100-03)
Sequence	ATGGCGGCGGCGAGGTTGTGGGTGGTTGCGGTGGCGGTGGCGGTGGCGGTGGCAGTGATG GCGGCGGCGGTGGAGGGGAAGAGCTACAACATCACGAAGATCCTGGCGGCGCACCCGGAG TTCTCCAAGTTCAACGAGATGCTGAGCAAGACGAGGCTGGCGTACGACATAAACCGGCGG CAGACGATCACGGTGCTGGCGGTGGACAACTCGGCGATGGCGTCGCTGGACCACTTCACC CTCCCCACCATCCGCCACATCCTCTCCCTCCACATCCTCGTCGACTACTACGGCTCCAAG AAGCTCCACGCCCTCTCCCATGGCGCCACCGCCTCCTCCTCCATGTTCCAGGCGACGGGG TCGGCGCCGGGGACGACGGGGTACGTGAACATCACGTCGCACAAGGGCGGGAAGATCGAC TTCATCTCGGAGGACGCGGACGAGAGCGCGAAGCCGTCGAGGTACGTGAAGTCGGTGAAG GAGATCCCCTACGACATCTCCGTGCTCCAGGTGAGCTCCGTGCTGTCCTCCTCCGAGGCC GAGGCGCCCGTCCCGCCGCCGGCGCCGGTGAACCTCACCGAGCTCCTCTCCAAGAAGTAC TGCAAGTCCTTCGCCGGCCTCCTCGCCGCCAACGCCGACGTCTTCCGCGCCGTCAACGAG ACCAAGGACAACGGCCTCACCCTCTTCTGCCCCGTCGACGCCGCCGTCGCCGCCTTCATG CCCTCCTACAAGAACCTCACCGCCAAGGCCAAGACCGCCATCCTCCTCTACCACGCCGTC CCGGACTACTTCTCGCTGCAGCTCCTCAAGTCCAACAATGGCATGGTCACCACGCTCGCC ACCGCCAGCGAGTCCAAGAAGGACTACAGCTACGACGTCCAGAATAAGGGCGAGACCGTC ACGCTCGACACCAGGGTCGTCAACTCCGCCGTCACCGCCACCGTCGGCGACGCCGAGCCG CTCGCCGTCTACGCCGTCACCAAGTTCCTCAAGCCCAAGGAGCTCTACAAGGTCGTCGAG GCCCCCGCGCCCGCGCCCGAGCCGTCCAAGAAGCACAAGTCGGCGGCCGACGACAGCAGC GACGACTCGTCGGACGATTCCGGCGACGTCAAAGCCCACAAGGGCGCCGCCGCTCCGGCG CCGCTCGCCCGGTGGGTGACCGCCGCCGCGGCCGCCGCCGTAGCAGCATTGATGCTAATG GCTTGA

Peptide Sequence

PEP ID	Os09t0248100-03
PEP Infomation	pep chromosome:IRGSP-1.0:9:3655064:3658609:1 gene:Os09g0248100 transcript:Os09t0248100-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 description:FAS1 domain domain containing protein. (Os09t0248100-01);FAS1 domain domain containing protein. (Os09t0248100-02);FAS1 domain domain containing protein. (Os09t0248100-03)
Sequence	MAAARLWVVAVAVAVAVAVMAAAVEGKSYNITKILAAHPEFSKFNEMLSKTRLAYDINRR QTITVLAVDNSAMASLDHFTLPTIRHILSLHILVDYYGSKKLHALSHGATASSSMFQATG SAPGTTGYVNITSHKGGKIDFISEDADESAKPSRYVKSVKEIPYDISVLQVSSVLSSSEA EAPVPPPAPVNLTELLSKKYCKSFAGLLAANADVFRAVNETKDNGLTLFCPVDAAVAAFM PSYKNLTAKAKTAILLYHAVPDYFSLQLLKSNNGMVTTLATASESKKDYSYDVQNKGETV TLDTRVVNSAVTATVGDAEPLAVYAVTKFLKPKELYKVVEAPAPAPEPSKKHKSAADDSS DDSSDDSGDVKAHKGAAAPAPLARWVTAAAAAAVAALMLMA

Transcript Sequence

Transcript ID	Os09t0248100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:3655064:3658609:1 gene:Os09g0248100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 description:FAS1 domain domain containing protein. (Os09t0248100-01);FAS1 domain domain containing protein. (Os09t0248100-02);FAS1 domain domain containing protein. (Os09t0248100-03)
Sequence	AGCTAGCTTCTCTGTAGGCTGTAGCTGCGGTGGCAATGGCGGCGGCGAGGTTGTGGGTGG TTGCGGTGGCGGTGGCGGTGGCGGTGGCAGTGATGGCGGCGGCGGTGGAGGGGAAGAGCT ACAACATCACGAAGATCCTGGCGGCGCACCCGGAGTTCTCCAAGTTCAACGAGATGCTGA GCAAGACGAGGCTGGCGTACGACATAAACCGGCGGCAGACGATCACGGTGCTGGCGGTGG ACAACTCGGCGATGGCGTCGCTGGACCACTTCACCCTCCCCACCATCCGCCACATCCTCT CCCTCCACATCCTCGTCGACTACTACGGCTCCAAGAAGCTCCACGCCCTCTCCCATGGCG CCACCGCCTCCTCCTCCATGTTCCAGGCGACGGGGTCGGCGCCGGGGACGACGGGGTACG TGAACATCACGTCGCACAAGGGCGGGAAGATCGACTTCATCTCGGAGGACGCGGACGAGA GCGCGAAGCCGTCGAGGTACGTGAAGTCGGTGAAGGAGATCCCCTACGACATCTCCGTGC TCCAGGTGAGCTCCGTGCTGTCCTCCTCCGAGGCCGAGGCGCCCGTCCCGCCGCCGGCGC CGGTGAACCTCACCGAGCTCCTCTCCAAGAAGTACTGCAAGTCCTTCGCCGGCCTCCTCG CCGCCAACGCCGACGTCTTCCGCGCCGTCAACGAGACCAAGGACAACGGCCTCACCCTCT TCTGCCCCGTCGACGCCGCCGTCGCCGCCTTCATGCCCTCCTACAAGAACCTCACCGCCA AGGCCAAGACCGCCATCCTCCTCTACCACGCCGTCCCGGACTACTTCTCGCTGCAGCTCC TCAAGTCCAACAATGGCATGGTCACCACGCTCGCCACCGCCAGCGAGTCCAAGAAGGACT ACAGCTACGACGTCCAGAATAAGGGCGAGACCGTCACGCTCGACACCAGGGTCGTCAACT CCGCCGTCACCGCCACCGTCGGCGACGCCGAGCCGCTCGCCGTCTACGCCGTCACCAAGT TCCTCAAGCCCAAGGAGCTCTACAAGGTCGTCGAGGCCCCCGCGCCCGCGCCCGAGCCGT CCAAGAAGCACAAGTCGGCGGCCGACGACAGCAGCGACGACTCGTCGGACGATTCCGGCG ACGTCAAAGCCCACAAGGGCGCCGCCGCTCCGGCGCCGCTCGCCCGGTGGGTGACCGCCG CCGCGGCCGCCGCCGTAGCAGCATTGATGCTAATGGCTTGATGCATGAGTCAGTCAATCT ACACTCTACAGAGCAGAGTGTGTCGAATTTGTTTTTTTTTTTTCCTTTTTGGTATGGCTG GTCAATTACAAATAAGAAACATAGATGTGTGAATGATTTGTAGTTCTTTGAGTTTTTTCT TTCTTTCTGTGGTGGTTTGATGTAATTACTTTGTAATTAATATAGTTGTCCATAATCCAC GGAAAAAGCTAAGAATGATTTCATCAT