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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0243200-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:3236285:3236983:1 gene:Os09g0243200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0243200-01)
Sequence

ATGGACGGCGAGATGGATTGGATCGCGGCGCGCTTCGTCCTGTCGGCGATAATGGGGGTG
CACCCGCTGGTGGCCGTCGACGACGCCGGGGCCGATGACGAGCACTTCCCGGTGGACGAC
GCCGCAGCCGTCCACGGCCACGCGTCGCCGCCTCCTGTCGCGCTGCCGGCGGCGGTGCTG
GCGCCGGAGGAGGTGGCCGGCGCGGTGGTGTGCGCGGTGTGCACGGAGGAGGTTGCGGCG
CGGCAGGCCGTGGTGCGGCTGCCCTGCGCGCACTGGTACCACGCCGGTTGCATCGGGCCG
TGGCTGCGGATCAGGACCAACTGCCCGACCTGCCGCGCCGAGCTGCCGCGGGAGCCCGCC
GCCGCCGACTGGCGTGTCCCGCGGCGCCCGGCGGTGGCGGAGACAGCCGGCAGCCGCCTG
CGGCGGGAGGCGTCGTATACGATGCTCGCAGGCACGTTGCCCAGCTAA

Peptide Sequence

PEP ID

Os09t0243200-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:3236285:3236983:1 gene:Os09g0243200 transcript:Os09t0243200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0243200-01)
Sequence

MDGEMDWIAARFVLSAIMGVHPLVAVDDAGADDEHFPVDDAAAVHGHASPPPVALPAAVL
APEEVAGAVVCAVCTEEVAARQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPREPA
AADWRVPRRPAVAETAGSRLRREASYTMLAGTLPS

Transcript Sequence

Transcript ID

Os09t0243200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:3236285:3236983:1 gene:Os09g0243200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0243200-01)
Sequence

ATCTTTCTTTCTGATTTCTCATTAATTTCGCATCAAGCTAGCTTGTGATCAGCAATGGAC
GGCGAGATGGATTGGATCGCGGCGCGCTTCGTCCTGTCGGCGATAATGGGGGTGCACCCG
CTGGTGGCCGTCGACGACGCCGGGGCCGATGACGAGCACTTCCCGGTGGACGACGCCGCA
GCCGTCCACGGCCACGCGTCGCCGCCTCCTGTCGCGCTGCCGGCGGCGGTGCTGGCGCCG
GAGGAGGTGGCCGGCGCGGTGGTGTGCGCGGTGTGCACGGAGGAGGTTGCGGCGCGGCAG
GCCGTGGTGCGGCTGCCCTGCGCGCACTGGTACCACGCCGGTTGCATCGGGCCGTGGCTG
CGGATCAGGACCAACTGCCCGACCTGCCGCGCCGAGCTGCCGCGGGAGCCCGCCGCCGCC
GACTGGCGTGTCCCGCGGCGCCCGGCGGTGGCGGAGACAGCCGGCAGCCGCCTGCGGCGG
GAGGCGTCGTATACGATGCTCGCAGGCACGTTGCCCAGCTAATCAATCATCATCGATCAA
TAGATTAATTTATTATACTATGTACATGTGTAAATTAATCGGCATGTATATACAACGAAG
GTGAAGTGAAAATTGTACAGAGGCAAACTCACGTAAACCCAGCGCCCGCTGGATAGAACG
GAACGATCTATGAAAGATAACATTTTTAATTAATCTGCT