Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0135400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:2685796:2688286:1 gene:Os09g0135400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein. (Os09t0135400-01)
Sequence	GGCAAATCCGGCGCAAAAAAGAAGAAACCCGCCGCCGCCGCCTCCGCCTCCGCCGCCGCC ACCAAATCATCTCCCGCCGCAACAGAGCCGAAGGCACCGACGCAGTCCCAGCCCCCCGCG GCCAACGGGGCGGCGCCGCATCTGGTGGACCCCGCCGTGCTCCTGCGCCGCGCGCACGAG CTCAAGGAGGAAGGCAACCGCCTGTTCCAGTCCCGCGACTACGGCGGCGCGCTGCGGCAG TACGAGCTCGCTCTCCGCCTCGCCCCGCGCGGCCACCCCGACCGCGCCGTCTTCCACAGC AACCGCGCCGCCTGCCTCCTCCAGCTCCGCCCCGTCGACCACAAGGCCGTCGCCGAGGAG TGCTCCCTCGCTCTCCAGGCGGAGCCGCTCTTCCCGCGCGCGCTCCTTCGCCGCGCCCGC GCGCTCGAGGCGCTCGGTCGCCACGAGCTCGCGCTTACCGACGCCCTTGCCCTCCTCGCT CTCGACCCCGACCACCAGGACGCCGTCGACCTCGTCCACCGCCTCCGCTCCCGCATTCTA TCCCCGTCCTCCTCAGCCTCAGGCTCTGCCACCTCCACCCCCGAACCAACTAGCCGCCCC TCCCCTGCTGCTCTTGGTGCCTCCGCTGTTGTTGCCGGCCTAGGCCCGTCCCTCCCCGCT CGCCCTTTCCCCAAGAAACCATCACCTCCTCCTCCGCCTGCTCAACAACAGCAATCGGTT CCTCCAATGTCAAAATTTAATCCGTCGCCACCATCGCCCAAGTTGGTGCCTTTCTCCAAC TCTCCGCCATCTTCTGCCAACGCATCAGCTGCTGAGAGCTCCCAGAAGGTCACGCCGACA CCTCTGGTTCCCTCTTCACTTTCGTTGAAAGACAAAGCGCTGATGGACAAGAAGGTTGTC ACAAGATCAAGGCCGCTCAAGCTGGTGTACGATCATGATATAAGGCTTGCGCAGATGCCA GAAAAATGCAGCTTCCGAACACTCCGTGAAGTTGTGGCATCACGATTCCCATCGTCCAAG GCTGTGCTGATTAAGTATAAGGATGCTGATGGTGATCTGGTTACCATTACTTGTTCCGCA GAACTTCGATTGGCCGAGTCCTGTGTTGATATAGCTGGCAGTGAGGTGATAGAAGATGGT GCACGGCATGGTCAGAAACTTCCAATGTTGAGACTTCACATTGTTGAAGTAAGCCCAGAT CAGGAGCCTCCAATGCCAACAGAAGAGGAGAAGCTGGAGCAGGATAATGAGTTGCTGGTG AAAGGTGAAGATAACTCTCCACATGCTTCAGCAGCTGTGGTGACTGATGCAGAGGTGACG AAACAAGATGTGGAGAATGTAGTTGCTGAAGCTGAACAGAACACCCTGACAGGGAAGAAA GATTGTGGCCATGCTGAGTGCAAGGAAGCTGAAATTGATGATTGGCTTCTTCAGTTCGCA GATTTATTCCGGAACCAGGTTGGTGTTGATGCAGATGCACATCTGGACCTGCATGAACTG GGAATGGAGCTGTGCTCTGAGGCGCTTGAGGAAACGGTTACAAGTGAGGAGGCACAAGCC CTCTTTGAGATGGCTGCAGCTAAATTCCAAGAGGTTGCTGCTTTGGCCCTATTCAACTGG GGAAATGTGCACATGTGTGCCGCAAGGAAACGCATTCCCCTAGATGAATCGGCTCCAAAG AAAGTCATGTCAGCTCAGCTCTGCACAGCTTATGATTGGGTGCGAGATAGGTATGCTCTT GCAGGGAGCAAGTACGAGGAGGCTCTTAAAATCAAGCCGGACTTTTATGAAGGGCTACTT GCTTTAGGCCAGCAACATTTTGAGACTGCAAAGCTTCATTGGTCATTTGCACTAGCAGAC AAGGTTGACCTGTCTGCTTGGGATTCTTCACAGACATTCAAGCTTTTTGACAGTGCTGAG CACAAGATGAGGGCTGCAACAGAAATGTGGGAGAAAGTAGAAGAGCAAAGAATGGCAGAA TTAAAAGAACCATCTAGCGAGGCACTGAAGAAAAGGAAGAAGCAACATAATGCAGATGGT CAAGGGGAGTTGACTCCAGAGGAGGCAGCTGAGCAGGCAGCAGTAATGAGGCAGCAAATT CACCTGTTCTGGGGTAATATGCTTTTTGAGCGTTCTCAAGTGGAATTCAAACTTGATATC GCTGATTGGAAGAAGAATCTTGATGCGTCCATTGAAAGGTTTAAGTTGGCTGGAGCGTCA GAATCAGATATCTCTGCAGTCTTGAAGAACCATTTTTCCAACACAGTTTCTGAGTGTGAA GATAAGAAAATCATGACTTTAGATACAGGAATCTCCCAAATAAGTAACAATATTGAGGAC AAGTGTATCCTTGAAAGCTAG

Peptide Sequence

PEP ID	Os09t0135400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:2685796:2688286:1 gene:Os09g0135400 transcript:Os09t0135400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein. (Os09t0135400-01)
Sequence	GKSGAKKKKPAAAASASAAATKSSPAATEPKAPTQSQPPAANGAAPHLVDPAVLLRRAHE LKEEGNRLFQSRDYGGALRQYELALRLAPRGHPDRAVFHSNRAACLLQLRPVDHKAVAEE CSLALQAEPLFPRALLRRARALEALGRHELALTDALALLALDPDHQDAVDLVHRLRSRIL SPSSSASGSATSTPEPTSRPSPAALGASAVVAGLGPSLPARPFPKKPSPPPPPAQQQQSV PPMSKFNPSPPSPKLVPFSNSPPSSANASAAESSQKVTPTPLVPSSLSLKDKALMDKKVV TRSRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSA ELRLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMPTEEEKLEQDNELLV KGEDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFA DLFRNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNW GNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLL ALGQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAE LKEPSSEALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDI ADWKKNLDASIERFKLAGASESDISAVLKNHFSNTVSECEDKKIMTLDTGISQISNNIED KCILES

Transcript Sequence

Transcript ID	Os09t0135400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:2685796:2688286:1 gene:Os09g0135400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein. (Os09t0135400-01)
Sequence	TGGGCAAATCCGGCGCAAAAAAGAAGAAACCCGCCGCCGCCGCCTCCGCCTCCGCCGCCG CCACCAAATCATCTCCCGCCGCAACAGAGCCGAAGGCACCGACGCAGTCCCAGCCCCCCG CGGCCAACGGGGCGGCGCCGCATCTGGTGGACCCCGCCGTGCTCCTGCGCCGCGCGCACG AGCTCAAGGAGGAAGGCAACCGCCTGTTCCAGTCCCGCGACTACGGCGGCGCGCTGCGGC AGTACGAGCTCGCTCTCCGCCTCGCCCCGCGCGGCCACCCCGACCGCGCCGTCTTCCACA GCAACCGCGCCGCCTGCCTCCTCCAGCTCCGCCCCGTCGACCACAAGGCCGTCGCCGAGG AGTGCTCCCTCGCTCTCCAGGCGGAGCCGCTCTTCCCGCGCGCGCTCCTTCGCCGCGCCC GCGCGCTCGAGGCGCTCGGTCGCCACGAGCTCGCGCTTACCGACGCCCTTGCCCTCCTCG CTCTCGACCCCGACCACCAGGACGCCGTCGACCTCGTCCACCGCCTCCGCTCCCGCATTC TATCCCCGTCCTCCTCAGCCTCAGGCTCTGCCACCTCCACCCCCGAACCAACTAGCCGCC CCTCCCCTGCTGCTCTTGGTGCCTCCGCTGTTGTTGCCGGCCTAGGCCCGTCCCTCCCCG CTCGCCCTTTCCCCAAGAAACCATCACCTCCTCCTCCGCCTGCTCAACAACAGCAATCGG TTCCTCCAATGTCAAAATTTAATCCGTCGCCACCATCGCCCAAGTTGGTGCCTTTCTCCA ACTCTCCGCCATCTTCTGCCAACGCATCAGCTGCTGAGAGCTCCCAGAAGGTCACGCCGA CACCTCTGGTTCCCTCTTCACTTTCGTTGAAAGACAAAGCGCTGATGGACAAGAAGGTTG TCACAAGATCAAGGCCGCTCAAGCTGGTGTACGATCATGATATAAGGCTTGCGCAGATGC CAGAAAAATGCAGCTTCCGAACACTCCGTGAAGTTGTGGCATCACGATTCCCATCGTCCA AGGCTGTGCTGATTAAGTATAAGGATGCTGATGGTGATCTGGTTACCATTACTTGTTCCG CAGAACTTCGATTGGCCGAGTCCTGTGTTGATATAGCTGGCAGTGAGGTGATAGAAGATG GTGCACGGCATGGTCAGAAACTTCCAATGTTGAGACTTCACATTGTTGAAGTAAGCCCAG ATCAGGAGCCTCCAATGCCAACAGAAGAGGAGAAGCTGGAGCAGGATAATGAGTTGCTGG TGAAAGGTGAAGATAACTCTCCACATGCTTCAGCAGCTGTGGTGACTGATGCAGAGGTGA CGAAACAAGATGTGGAGAATGTAGTTGCTGAAGCTGAACAGAACACCCTGACAGGGAAGA AAGATTGTGGCCATGCTGAGTGCAAGGAAGCTGAAATTGATGATTGGCTTCTTCAGTTCG CAGATTTATTCCGGAACCAGGTTGGTGTTGATGCAGATGCACATCTGGACCTGCATGAAC TGGGAATGGAGCTGTGCTCTGAGGCGCTTGAGGAAACGGTTACAAGTGAGGAGGCACAAG CCCTCTTTGAGATGGCTGCAGCTAAATTCCAAGAGGTTGCTGCTTTGGCCCTATTCAACT GGGGAAATGTGCACATGTGTGCCGCAAGGAAACGCATTCCCCTAGATGAATCGGCTCCAA AGAAAGTCATGTCAGCTCAGCTCTGCACAGCTTATGATTGGGTGCGAGATAGGTATGCTC TTGCAGGGAGCAAGTACGAGGAGGCTCTTAAAATCAAGCCGGACTTTTATGAAGGGCTAC TTGCTTTAGGCCAGCAACATTTTGAGACTGCAAAGCTTCATTGGTCATTTGCACTAGCAG ACAAGGTTGACCTGTCTGCTTGGGATTCTTCACAGACATTCAAGCTTTTTGACAGTGCTG AGCACAAGATGAGGGCTGCAACAGAAATGTGGGAGAAAGTAGAAGAGCAAAGAATGGCAG AATTAAAAGAACCATCTAGCGAGGCACTGAAGAAAAGGAAGAAGCAACATAATGCAGATG GTCAAGGGGAGTTGACTCCAGAGGAGGCAGCTGAGCAGGCAGCAGTAATGAGGCAGCAAA TTCACCTGTTCTGGGGTAATATGCTTTTTGAGCGTTCTCAAGTGGAATTCAAACTTGATA TCGCTGATTGGAAGAAGAATCTTGATGCGTCCATTGAAAGGTTTAAGTTGGCTGGAGCGT CAGAATCAGATATCTCTGCAGTCTTGAAGAACCATTTTTCCAACACAGTTTCTGAGTGTG AAGATAAGAAAATCATGACTTTAGATACAGGAATCTCCCAAATAAGTAACAATATTGAGG ACAAGTGTATCCTTGAAAGCTAGGTTTTCATGGTTTTAAGTTGGATAACATCCATGCCCA TATTCTTATCTGTTCTTGATAATATTTTCCTGATGTTGTTTTATGACCTCCTAATTAGGG ATTACAGCACAATGAATTTTCCGTTACCTGC