Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0133200-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:2512468:2517089:-1 gene:Os09g0133200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH- dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (Peroxisomal short-chain alcohol dehydrogenase) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (SCAD-SRL) (humNRDR) (PSCD). Splice isoform 2. (Os09t0133200-01);Similar to Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH- dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (Peroxisomal short-chain alcohol dehydrogenase) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (SCAD-SRL) (humNRDR) (PSCD). Splice isoform 2. (Os09t0133200-02)
Sequence	ATGGAGGTGAAGTGCCGTCGGCTGGAGGGGAAGGTAGCCGTCGTGACGGCCTCCACGCAG GGCATCGGTCTCGCCATCGCCGAGCGCCTCGGCCTCGAGGGCGCCGCCGTCGTCATCTCC TCCCGCAAGAAGAAGAACGTCGACGAGGCGGTCGTGGGCCTCAGGGCGAAGGGGATCACC GTCGTCGGGGTGGTCTGCCATGTCTCCATCCCGGAGCAGCGCAAGAACCTCATCGACACG GCGGTCAAGAATTTTGGGCATATCGACATAGTTGTCTCCAATGCTGCTGCCAATCCTTCC GTAGATAACATATTAGAAATGAAAGAGCCTATCCTTGACAAACTATGGGATATTAATGTT AAGGCATCTATTCTTCTTCTTCAGGATGCTGCTGCATATTTGCGGAAGGGATCATCCGTG ATATTGATTTCTTCAATTACTGGCTATAATCCAGAACCAGCATTGTCGATGTATGCTGTT ACAAAAACTGCCCTGCTTGGTCTCACAAAGGCTCTTGCTGCTGAGATGGGGCCAAATACT CGTGTTAACTGTATAGCCCCTGGTTTTGTTCCTACAAATTTTGCTCGTTTCCTCACAACT AATGACACCATTAAAAATGAGCTTATTGACAGGAGCACACTTAAGAGATTGGGTACTGTG GAAGACATGGCTGCAGCCGCAGCTTTCTTGGCATCAGACGATGCATCATTCATTACAGCT GAAACTATTGTTGTTGCTGGAGGAACTCGATCTAGGCTGTAG

Peptide Sequence

PEP ID	Os09t0133200-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:2512468:2517089:-1 gene:Os09g0133200 transcript:Os09t0133200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH- dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (Peroxisomal short-chain alcohol dehydrogenase) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (SCAD-SRL) (humNRDR) (PSCD). Splice isoform 2. (Os09t0133200-01);Similar to Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH- dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (Peroxisomal short-chain alcohol dehydrogenase) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (SCAD-SRL) (humNRDR) (PSCD). Splice isoform 2. (Os09t0133200-02)
Sequence	MEVKCRRLEGKVAVVTASTQGIGLAIAERLGLEGAAVVISSRKKKNVDEAVVGLRAKGIT VVGVVCHVSIPEQRKNLIDTAVKNFGHIDIVVSNAAANPSVDNILEMKEPILDKLWDINV KASILLLQDAAAYLRKGSSVILISSITGYNPEPALSMYAVTKTALLGLTKALAAEMGPNT RVNCIAPGFVPTNFARFLTTNDTIKNELIDRSTLKRLGTVEDMAAAAAFLASDDASFITA ETIVVAGGTRSRL

Transcript Sequence

Transcript ID	Os09t0133200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:2512468:2517089:-1 gene:Os09g0133200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH- dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (Peroxisomal short-chain alcohol dehydrogenase) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (SCAD-SRL) (humNRDR) (PSCD). Splice isoform 2. (Os09t0133200-01);Similar to Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH- dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (Peroxisomal short-chain alcohol dehydrogenase) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (SCAD-SRL) (humNRDR) (PSCD). Splice isoform 2. (Os09t0133200-02)
Sequence	CGCAATATCGCATCGACGCCTCGTCCCTCCTAGGCCTAGCTAGTCTACTCCGACCAAGTT GTCGCCGAGAAGCGAGGAGCGCCGGCGATGGAGGTGAAGTGCCGTCGGCTGGAGGGGAAG GTAGCCGTCGTGACGGCCTCCACGCAGGGCATCGGTCTCGCCATCGCCGAGCGCCTCGGC CTCGAGGGCGCCGCCGTCGTCATCTCCTCCCGCAAGAAGAAGAACGTCGACGAGGCGGTC GTGGGCCTCAGGGCGAAGGGGATCACCGTCGTCGGGGTGGTCTGCCATGTCTCCATCCCG GAGCAGCGCAAGAACCTCATCGACACGGCGGTCAAGAATTTTGGGCATATCGACATAGTT GTCTCCAATGCTGCTGCCAATCCTTCCGTAGATAACATATTAGAAATGAAAGAGCCTATC CTTGACAAACTATGGGATATTAATGTTAAGGCATCTATTCTTCTTCTTCAGGATGCTGCT GCATATTTGCGGAAGGGATCATCCGTGATATTGATTTCTTCAATTACTGGCTATAATCCA GAACCAGCATTGTCGATGTATGCTGTTACAAAAACTGCCCTGCTTGGTCTCACAAAGGCT CTTGCTGCTGAGATGGGGCCAAATACTCGTGTTAACTGTATAGCCCCTGGTTTTGTTCCT ACAAATTTTGCTCGTTTCCTCACAACTAATGACACCATTAAAAATGAGCTTATTGACAGG AGCACACTTAAGAGATTGGGTACTGTGGAAGACATGGCTGCAGCCGCAGCTTTCTTGGCA TCAGACGATGCATCATTCATTACAGCTGAAACTATTGTTGTTGCTGGAGGAACTCGATCT AGGCTGTAGATCTAAGCTGGGCTTGGCTATGGTTTGACAGGCTGGCGACTTACAAAGTGC ACTTCTTGCTGGTAAATAACCTATAGTTCTTGCTATAGGCAATATAATACTATATGTACA AGGACCGATGTTAAACTGCTTAAATCGTGACCGGAACTTTTTTCGTTGCTTTG