Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0132600-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:2489928:2493529:-1 gene:Os09g0132600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DAG protein. (Os09t0132600-01)
Sequence

ATGGTGTCGGCGTCGCGCTTCGTCCTCCTCTCGAGGCTCCCCGCCGCCGCCGCCTCCTCC
CGCTTCCTCCGCCCGCTCGCCGCCGCGGGGAGCCTCCTGCCGGCGGCGCTTGCCCCCTTC
GCCCCGCCCGCGGCGGGGGCCAGGTGCTTCGCCACGCAGCCGGCGACCTCGTCGCTGCGG
GACTCGTCGCCGAACTGGAGCAACCGGCCCCCCAAGGAGACGATCCTCCTAGACGGGTGC
GACTTCGAGCACTGGCTGGTCGTCATGGACCCGCCCCCCGGCGATCCCTCCAACCCCGAG
CCCACCCGCGATGAGATTATCGACGGCTACATCAAAACCCTCGCCCAGATCGTTGGAAGT
GAGGACGAAGCACGGCATAAGATATACTCAGTGTCAACTCGGCATTACTTTGCTTTTGGT
GCTCTTGTATCTGAGGAACTCTCCTACAAACTCAAAGAGTTGCCCAAGGTCCGCTGGGTT
CTTCCAGACTCATATCTGGATGTCAGAAATAAGGACTATGGAGGAGAGCCTTTTATAAAT
GGAGAAGCTGTTCCTTATGACCCTAAGTACCATGAGGAGTGGGTGAGAAACAATGCACGT
GCCAATGAAAGGACCCGACGCAATGATAGGCCTAGAAACTTTGACAGGTCAAGGAATTTC
GAGAGGAGAAGGGAGAACATGCACAACTTCCAGAACAGAGATGTGCCTCCTGGGCAGGGA
TTCAACAGCCCTCCCCCACCAGGGCAGGGCCCAGTCCTGCCTCGTGATGCTCCTCCGATG
CCTCCACCTCCATCTCCACCAAATCCAGGTGCTCCTCCAAGCTACCAGCCCCATGCACCA
AATCCGCAAGCAGGCTATACAAACTATCAGGGTGGTGTGCCTGGTTACCAAGGTAGAGCC
CCTGGCTATCAAGGTGGCAACCAGGAATACCGAGGTCCACCCCCACCCCCACCCTCTGCT
TACCAGGGCAACAACCCTGGATACCAGGGAGGAGGGCCAGGTTACCATGGTGGCAACCCA
CCTCCTTATCAAGCCGGCAACCCACCTCCTTATCAAGCCGGCAACCCTGTCTTTGCTGGT
GGTGCACCAGGCTACCAAGGCCAAGGAGGCAACCCTAGTTACCAGCAAGGCAGCGATAAC
TACAATGCCGGTGCGCCGGCCTATAAGAGGGATGAGCCAGGGAGGAATTACCAGTAG

Peptide Sequence

PEP ID

Os09t0132600-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:2489928:2493529:-1 gene:Os09g0132600 transcript:Os09t0132600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DAG protein. (Os09t0132600-01)
Sequence

MVSASRFVLLSRLPAAAASSRFLRPLAAAGSLLPAALAPFAPPAAGARCFATQPATSSLR
DSSPNWSNRPPKETILLDGCDFEHWLVVMDPPPGDPSNPEPTRDEIIDGYIKTLAQIVGS
EDEARHKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFIN
GEAVPYDPKYHEEWVRNNARANERTRRNDRPRNFDRSRNFERRRENMHNFQNRDVPPGQG
FNSPPPPGQGPVLPRDAPPMPPPPSPPNPGAPPSYQPHAPNPQAGYTNYQGGVPGYQGRA
PGYQGGNQEYRGPPPPPPSAYQGNNPGYQGGGPGYHGGNPPPYQAGNPPPYQAGNPVFAG
GAPGYQGQGGNPSYQQGSDNYNAGAPAYKRDEPGRNYQ

Transcript Sequence

Transcript ID

Os09t0132600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:2489928:2493529:-1 gene:Os09g0132600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DAG protein. (Os09t0132600-01)
Sequence

CCCATTCCCCAATCTAGGTTTTTCGCGATGGTGTCGGCGTCGCGCTTCGTCCTCCTCTCG
AGGCTCCCCGCCGCCGCCGCCTCCTCCCGCTTCCTCCGCCCGCTCGCCGCCGCGGGGAGC
CTCCTGCCGGCGGCGCTTGCCCCCTTCGCCCCGCCCGCGGCGGGGGCCAGGTGCTTCGCC
ACGCAGCCGGCGACCTCGTCGCTGCGGGACTCGTCGCCGAACTGGAGCAACCGGCCCCCC
AAGGAGACGATCCTCCTAGACGGGTGCGACTTCGAGCACTGGCTGGTCGTCATGGACCCG
CCCCCCGGCGATCCCTCCAACCCCGAGCCCACCCGCGATGAGATTATCGACGGCTACATC
AAAACCCTCGCCCAGATCGTTGGAAGTGAGGACGAAGCACGGCATAAGATATACTCAGTG
TCAACTCGGCATTACTTTGCTTTTGGTGCTCTTGTATCTGAGGAACTCTCCTACAAACTC
AAAGAGTTGCCCAAGGTCCGCTGGGTTCTTCCAGACTCATATCTGGATGTCAGAAATAAG
GACTATGGAGGAGAGCCTTTTATAAATGGAGAAGCTGTTCCTTATGACCCTAAGTACCAT
GAGGAGTGGGTGAGAAACAATGCACGTGCCAATGAAAGGACCCGACGCAATGATAGGCCT
AGAAACTTTGACAGGTCAAGGAATTTCGAGAGGAGAAGGGAGAACATGCACAACTTCCAG
AACAGAGATGTGCCTCCTGGGCAGGGATTCAACAGCCCTCCCCCACCAGGGCAGGGCCCA
GTCCTGCCTCGTGATGCTCCTCCGATGCCTCCACCTCCATCTCCACCAAATCCAGGTGCT
CCTCCAAGCTACCAGCCCCATGCACCAAATCCGCAAGCAGGCTATACAAACTATCAGGGT
GGTGTGCCTGGTTACCAAGGTAGAGCCCCTGGCTATCAAGGTGGCAACCAGGAATACCGA
GGTCCACCCCCACCCCCACCCTCTGCTTACCAGGGCAACAACCCTGGATACCAGGGAGGA
GGGCCAGGTTACCATGGTGGCAACCCACCTCCTTATCAAGCCGGCAACCCACCTCCTTAT
CAAGCCGGCAACCCTGTCTTTGCTGGTGGTGCACCAGGCTACCAAGGCCAAGGAGGCAAC
CCTAGTTACCAGCAAGGCAGCGATAACTACAATGCCGGTGCGCCGGCCTATAAGAGGGAT
GAGCCAGGGAGGAATTACCAGTAGAACAACACTGCTAGAACAAATGATATGTAGAGTCTA
GTACGAGCATAACGCTATTTGCTGTCTGTTTTGGAGTCTATCGCATGTATACTCTTACCC
TGCTTTGCAAACTCAGTTTCTTATGTGTCGACT