Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0130800-03
CDS Infomation	cds chromosome:IRGSP-1.0:9:2357522:2360984:-1 gene:Os09g0130800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0130800-01);DEAD-like helicase, N-terminal domain containing protein. (Os09t0130800-02);Similar to predicted protein. (Os09t0130800-03);Similar to predicted protein. (Os09t0130800-04)
Sequence	ATGGCTATCAAGCTTACAAAATATCAGTTCTTTTCTTCTCGTGCCACTGCACTGCACCTA AGGAGGAGAGAGCTGAAGTTGCTTCCATTCCCATCTTTTCCCTGCAGCTCTAGTTCAGCT CCTAACACTTGTTCACAGCAAAGTCATCTCCTGTTAGTTTCATCTGCAGGACCTAGAGAA CAAACATTACTTCCGGCTGATTCCCGTTCTTCTCTCCCTCATGGCATCACTGATAACGGT ACAAGAAAGGAAGGAAGGAGGAGGAGGAGGGGGAGAAAGAGGAAGGAGACAGCAAAAGAT GAAGGGGAGTGTGTTCCATCTGCGGAGGAAGTGTCCATTAGGGTAAATACTCTTTATGAG AGTGGCGACCCCATTGGGAAGAAGGAGTTGGGCCGGTGCGTGGTACAATGGCTAAAGCAG GGTATGCACTCAATGGCTATAAAATATGCTTCCACAGAAATGCAGAACGATGGAGCAACA TTCTTACTGGATGGTGGATCATCTGAAGACAACCTCGGATTTGTGATGCTTGCACAGCCT TATCTATCAGCAATTCCCATGCCCAAGGGACAGGAGGCGCTCTGCCTCAAGGCCTCTACT CACTATCCTACCCTCTTTGACCACTTTCAAAGGGAACTCCGTGATGTTCTGTTGAAACAA CAGAACCAGGGTCTTATTTCTGATTGGCGCACCACTCAATCTTGGATGCTTCTGAAAGAA TTGGCTAACTCAGCTCAGCATCGAGCAGCTGCCCGCAAACCTAAAGCTCCTACTACGCAC AGTACTCTTGGCATAAGTCTTGATAAGACAAGGTTGATGCAGACCAAAATTGAAGACTTT GTCAAGAAAATGTCAGACCTTCTACATATAGAACGAGATGCGGAGCTGGAGTTTACACAA GAAGAACTGAATGCCACCCCTGTGATGGATGGGAACTCAAAGAAGCCACTCAAACCAGTA GAGTACTTAGTCACTCATGGGCAGTCACAGCAAGAGCAGTGCGATACCATTTGCAATTTG AATGTTATCAGCAGTTCAACTGGGTTGGATGGCCAGCATCTGGTCCTATTTAGAGTGAAA GATAACCATAGATTGCCTCCAACCACACTCTCTCCTGGGGATATGGTTTGTATCAGGACA TGTGATAACCGGGGGGAAATTACCACATCTTGCATGCAAGGCTTTATATATAATCTTGGT GAGGATGGTTGCAGCATTACCGTGACACTGAAATCCCGCCGTGGTGATCCTACGTTCTCC AAGCTTTTTGGGAAAAATGTGCGGATTGACAGGATTCAGGCATTGGCTGACGCACTTACA TATGAGCGAAATTGTGAAGCACTGATGCTTCTTCAAAGGAAAGGTTTACAGAAAAAGAAT TCTTCCATTGGAGTAGTAGCCACTCTGTTTGGGGACAAGGAAGACATGATGATGATGGAG CAGAATAATCTGGCTGATTGGGGAGAATCAACAATACATGATGATGAGCTATTGAAAAAG AACAAATATGACTTTGATGCCTCCCAGTTAAAAGCTATCACACTAGGCTTGAACAACAAA AGGCCTGTCCTAATAATCCAAGGACCTCCTGGCACGGGCAAGACTGGTTTGCTTAGTTAT CTCATTGCATGTGCTGTCCGAAAGGGTGAACGCGTTCTCGTAACTGCTCCAAGCAATGCA GCAGTTGATAACATGGTGGAGAAGTTGTCAGATACTGGACTGGACACAGTACGAGTTGGA AATCCTGCTAGGATATCTCCATCTGTTGCTTCAAGGTCCTTGGGAGAGCTTGTGAACAGA AGACTTCAGAAGTTCACAGAAGAGTTCGAGAGGAAAAAATCCGACTTGAGAAAGGACTTG AAGCATTGCATACAGGATGATACATTAGCCGCAGGTATACGTCAACTGTTGAAGCAGCTT GGGAAGAACTTT

Peptide Sequence

PEP ID	Os09t0130800-03
PEP Infomation	pep chromosome:IRGSP-1.0:9:2357522:2360984:-1 gene:Os09g0130800 transcript:Os09t0130800-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0130800-01);DEAD-like helicase, N-terminal domain containing protein. (Os09t0130800-02);Similar to predicted protein. (Os09t0130800-03);Similar to predicted protein. (Os09t0130800-04)
Sequence	MAIKLTKYQFFSSRATALHLRRRELKLLPFPSFPCSSSSAPNTCSQQSHLLLVSSAGPRE QTLLPADSRSSLPHGITDNGTRKEGRRRRRGRKRKETAKDEGECVPSAEEVSIRVNTLYE SGDPIGKKELGRCVVQWLKQGMHSMAIKYASTEMQNDGATFLLDGGSSEDNLGFVMLAQP YLSAIPMPKGQEALCLKASTHYPTLFDHFQRELRDVLLKQQNQGLISDWRTTQSWMLLKE LANSAQHRAAARKPKAPTTHSTLGISLDKTRLMQTKIEDFVKKMSDLLHIERDAELEFTQ EELNATPVMDGNSKKPLKPVEYLVTHGQSQQEQCDTICNLNVISSSTGLDGQHLVLFRVK DNHRLPPTTLSPGDMVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVTLKSRRGDPTFS KLFGKNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMME QNNLADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSY LIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNR RLQKFTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNF

Transcript Sequence

Transcript ID	Os09t0130800-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:2357522:2360984:-1 gene:Os09g0130800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0130800-01);DEAD-like helicase, N-terminal domain containing protein. (Os09t0130800-02);Similar to predicted protein. (Os09t0130800-03);Similar to predicted protein. (Os09t0130800-04)
Sequence	GTTAGAACTGAACTGTGAGGAGCTTCAGAGACTATGGAGCAAGGTGTAGCTGGAGAAAAC GTGTACAACACAGAGAGACTGCACAGCTACGGAAGTGGTAAACACCAGTGCTAGTATATG TATGGATTGAAGGTAACGTAGCATTTGCCTTCACCACAACTCTGCAAGTCACCAGCATGG CTATCAAGCTTACAAAATATCAGTTCTTTTCTTCTCGTGCCACTGCACTGCACCTAAGGA GGAGAGAGCTGAAGTTGCTTCCATTCCCATCTTTTCCCTGCAGCTCTAGTTCAGCTCCTA ACACTTGTTCACAGCAAAGTCATCTCCTGTTAGTTTCATCTGCAGGACCTAGAGAACAAA CATTACTTCCGGCTGATTCCCGTTCTTCTCTCCCTCATGGCATCACTGATAACGGTACAA GAAAGGAAGGAAGGAGGAGGAGGAGGGGGAGAAAGAGGAAGGAGACAGCAAAAGATGAAG GGGAGTGTGTTCCATCTGCGGAGGAAGTGTCCATTAGGGTAAATACTCTTTATGAGAGTG GCGACCCCATTGGGAAGAAGGAGTTGGGCCGGTGCGTGGTACAATGGCTAAAGCAGGGTA TGCACTCAATGGCTATAAAATATGCTTCCACAGAAATGCAGAACGATGGAGCAACATTCT TACTGGATGGTGGATCATCTGAAGACAACCTCGGATTTGTGATGCTTGCACAGCCTTATC TATCAGCAATTCCCATGCCCAAGGGACAGGAGGCGCTCTGCCTCAAGGCCTCTACTCACT ATCCTACCCTCTTTGACCACTTTCAAAGGGAACTCCGTGATGTTCTGTTGAAACAACAGA ACCAGGGTCTTATTTCTGATTGGCGCACCACTCAATCTTGGATGCTTCTGAAAGAATTGG CTAACTCAGCTCAGCATCGAGCAGCTGCCCGCAAACCTAAAGCTCCTACTACGCACAGTA CTCTTGGCATAAGTCTTGATAAGACAAGGTTGATGCAGACCAAAATTGAAGACTTTGTCA AGAAAATGTCAGACCTTCTACATATAGAACGAGATGCGGAGCTGGAGTTTACACAAGAAG AACTGAATGCCACCCCTGTGATGGATGGGAACTCAAAGAAGCCACTCAAACCAGTAGAGT ACTTAGTCACTCATGGGCAGTCACAGCAAGAGCAGTGCGATACCATTTGCAATTTGAATG TTATCAGCAGTTCAACTGGGTTGGATGGCCAGCATCTGGTCCTATTTAGAGTGAAAGATA ACCATAGATTGCCTCCAACCACACTCTCTCCTGGGGATATGGTTTGTATCAGGACATGTG ATAACCGGGGGGAAATTACCACATCTTGCATGCAAGGCTTTATATATAATCTTGGTGAGG ATGGTTGCAGCATTACCGTGACACTGAAATCCCGCCGTGGTGATCCTACGTTCTCCAAGC TTTTTGGGAAAAATGTGCGGATTGACAGGATTCAGGCATTGGCTGACGCACTTACATATG AGCGAAATTGTGAAGCACTGATGCTTCTTCAAAGGAAAGGTTTACAGAAAAAGAATTCTT CCATTGGAGTAGTAGCCACTCTGTTTGGGGACAAGGAAGACATGATGATGATGGAGCAGA ATAATCTGGCTGATTGGGGAGAATCAACAATACATGATGATGAGCTATTGAAAAAGAACA AATATGACTTTGATGCCTCCCAGTTAAAAGCTATCACACTAGGCTTGAACAACAAAAGGC CTGTCCTAATAATCCAAGGACCTCCTGGCACGGGCAAGACTGGTTTGCTTAGTTATCTCA TTGCATGTGCTGTCCGAAAGGGTGAACGCGTTCTCGTAACTGCTCCAAGCAATGCAGCAG TTGATAACATGGTGGAGAAGTTGTCAGATACTGGACTGGACACAGTACGAGTTGGAAATC CTGCTAGGATATCTCCATCTGTTGCTTCAAGGTCCTTGGGAGAGCTTGTGAACAGAAGAC TTCAGAAGTTCACAGAAGAGTTCGAGAGGAAAAAATCCGACTTGAGAAAGGACTTGAAGC ATTGCATACAGGATGATACATTAGCCGCAGGTATACGTCAACTGTTGAAGCAGCTTGGGA AGAACTTT