Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0123200-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:1795020:1799552:1 gene:Os09g0123200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OSFCA PROTEIN description:Similar to Flowering time control protein isoform OsFCA-1. (Os09t0123200-01);Similar to Flowering time control protein isoform OsFCA-1. (Os09t0123200-02)
Sequence	GCAATGGGCCCTATTCAAGTCAGATATGCTGATGGTGAAAGGGAACGCCATGGGGCTATT GAGCACAAGCTGTTTGTCGCATCACTCAATAAGCAAGCTACTGCGAAGGAGATTGAAGAG ATTTTTGCGCCGTATGGTCATGTGGAAGATGTCTACATTATGAAAGATGGCATGAGGCAG AGCCGAGGTTGTGGCTTTGTCAAATTCTCATCACGAGAACCGGCGCTGGCAGCCATGAGT GCTCTGAGTGGGAATTATGTAATGAGGGGGTGCGAGCAACCATTAATAATTCGGTTCGCT GATCCTAAGAGACCTAGACCTGGAGAATCAAGGGGTGGTCCTGCATTTGGAGGTCCTGGT TTCAGTCCACGATCTGATGCAGCTCTTGTTATCAGGCCGACCGCCAACCTTGATGAACCA AGGGGTCGGCATATGCCTCCTGACTCTTGGCATCCATCAAGCCCAAGGTCAGCACCTCAT CAGTTTAATAACTTTGGATCTGACAATCCTATGGCTCCGAAAGGGAGTACTGTTACATCA ACAACAGATACGGCCACTTTTCGACCTCAGATGTTCAGCGGAAATGGCTCTTTGTCAAGC CAAACAGCTGTGCCAAGTTCGTCACATATGGGCATGAACCCTCCTCCCATGGCACAAGGC CATCATCTGGGAGGCCAGCAGATCCCACCTTTGCAAAAGCTACCAGGGTTGCCTCAGAAT TTCCCTGTTCAATTGCAGAATAATCAGCTGGGACAACCCTTGCAGGGTCCTGCTCAACAG ATTGGTCAGCTTCAAGTTCCACAATCTATGGGTCCTGGTTCTTTTGGCCAGAATAGGTTA TCTGGTCAGCTTCCTGTGTCACAGCCGTTGATGCAACAAAATGCTTCCGTCAGCGCTGTG CAGGTGCCTTCAGCCGTGTCCAATTCCATGCAAGCTATTCCCGGGCAACAGCATCTTCCC TCAAATGTTGCACCACAAATGCTTCAGCAGCCAGTGCAGCAGATGCCATCGCAAGCACCA CAATTGCTACTCCAACAGCAAGCTGCTTTGCAATCCAGTTATCAATCTTCACAGCAGGCA ATTTATCAGCTTCAACAACAGCTGCAACTAATGCAGCAGCAGCAGCAATCGAATCTAAAC CATCAACAACCCACACAGGGTCAGCCAGTGCAATCTAGTAACCCTGGTGCCCCAAATGCC ATTATTCCATCAAACATTAATACAATTCCCCAGCAGGCTACTTCACCTGCAGTTCCTTTA ACCTGCAATTGGACTGAACATACGTCTCCTGAAGGTTTTAAATACTACTACAATAGCATA ACTCGAGAGAGTAAGTGGGATAAGCCTGAAGAGTATGTGCTGTATGAGCAACAGCAACAG CAGCAGCAACAGCAGAAACTACTTTTGCTTCAACAGCACCAACAAAAACTTGCCATGCAG CAACTTCAGTCACCACCTCAGGCTCAGACACATCCAGCAATGCAACCTGTCCAACAAATT CCTCAGGCACAACAAGGACAGCAACAAATGCAGATGAAACAGCAGGAATTGAATTATACT CAGCTACAGACTCCTGGTGCTATTGATCCCAGTAGGATACAACAGGGCATCCAATCTGCA CAAGAACGTGCTTGGAAAAGTTGA

Peptide Sequence

PEP ID	Os09t0123200-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:1795020:1799552:1 gene:Os09g0123200 transcript:Os09t0123200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OSFCA PROTEIN description:Similar to Flowering time control protein isoform OsFCA-1. (Os09t0123200-01);Similar to Flowering time control protein isoform OsFCA-1. (Os09t0123200-02)
Sequence	AMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQ SRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPRPGESRGGPAFGGPG FSPRSDAALVIRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFNNFGSDNPMAPKGSTVTS TTDTATFRPQMFSGNGSLSSQTAVPSSSHMGMNPPPMAQGHHLGGQQIPPLQKLPGLPQN FPVQLQNNQLGQPLQGPAQQIGQLQVPQSMGPGSFGQNRLSGQLPVSQPLMQQNASVSAV QVPSAVSNSMQAIPGQQHLPSNVAPQMLQQPVQQMPSQAPQLLLQQQAALQSSYQSSQQA IYQLQQQLQLMQQQQQSNLNHQQPTQGQPVQSSNPGAPNAIIPSNINTIPQQATSPAVPL TCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYEQQQQQQQQQKLLLLQQHQQKLAMQ QLQSPPQAQTHPAMQPVQQIPQAQQGQQQMQMKQQELNYTQLQTPGAIDPSRIQQGIQSA QERAWKS

Transcript Sequence

Transcript ID	Os09t0123200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:1795020:1799552:1 gene:Os09g0123200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OSFCA PROTEIN description:Similar to Flowering time control protein isoform OsFCA-1. (Os09t0123200-01);Similar to Flowering time control protein isoform OsFCA-1. (Os09t0123200-02)
Sequence	GGCAATGGGCCCTATTCAAGTCAGATATGCTGATGGTGAAAGGGAACGCCATGGGGCTAT TGAGCACAAGCTGTTTGTCGCATCACTCAATAAGCAAGCTACTGCGAAGGAGATTGAAGA GATTTTTGCGCCGTATGGTCATGTGGAAGATGTCTACATTATGAAAGATGGCATGAGGCA GAGCCGAGGTTGTGGCTTTGTCAAATTCTCATCACGAGAACCGGCGCTGGCAGCCATGAG TGCTCTGAGTGGGAATTATGTAATGAGGGGGTGCGAGCAACCATTAATAATTCGGTTCGC TGATCCTAAGAGACCTAGACCTGGAGAATCAAGGGGTGGTCCTGCATTTGGAGGTCCTGG TTTCAGTCCACGATCTGATGCAGCTCTTGTTATCAGGCCGACCGCCAACCTTGATGAACC AAGGGGTCGGCATATGCCTCCTGACTCTTGGCATCCATCAAGCCCAAGGTCAGCACCTCA TCAGTTTAATAACTTTGGATCTGACAATCCTATGGCTCCGAAAGGGAGTACTGTTACATC AACAACAGATACGGCCACTTTTCGACCTCAGATGTTCAGCGGAAATGGCTCTTTGTCAAG CCAAACAGCTGTGCCAAGTTCGTCACATATGGGCATGAACCCTCCTCCCATGGCACAAGG CCATCATCTGGGAGGCCAGCAGATCCCACCTTTGCAAAAGCTACCAGGGTTGCCTCAGAA TTTCCCTGTTCAATTGCAGAATAATCAGCTGGGACAACCCTTGCAGGGTCCTGCTCAACA GATTGGTCAGCTTCAAGTTCCACAATCTATGGGTCCTGGTTCTTTTGGCCAGAATAGGTT ATCTGGTCAGCTTCCTGTGTCACAGCCGTTGATGCAACAAAATGCTTCCGTCAGCGCTGT GCAGGTGCCTTCAGCCGTGTCCAATTCCATGCAAGCTATTCCCGGGCAACAGCATCTTCC CTCAAATGTTGCACCACAAATGCTTCAGCAGCCAGTGCAGCAGATGCCATCGCAAGCACC ACAATTGCTACTCCAACAGCAAGCTGCTTTGCAATCCAGTTATCAATCTTCACAGCAGGC AATTTATCAGCTTCAACAACAGCTGCAACTAATGCAGCAGCAGCAGCAATCGAATCTAAA CCATCAACAACCCACACAGGGTCAGCCAGTGCAATCTAGTAACCCTGGTGCCCCAAATGC CATTATTCCATCAAACATTAATACAATTCCCCAGCAGGCTACTTCACCTGCAGTTCCTTT AACCTGCAATTGGACTGAACATACGTCTCCTGAAGGTTTTAAATACTACTACAATAGCAT AACTCGAGAGAGTAAGTGGGATAAGCCTGAAGAGTATGTGCTGTATGAGCAACAGCAACA GCAGCAGCAACAGCAGAAACTACTTTTGCTTCAACAGCACCAACAAAAACTTGCCATGCA GCAACTTCAGTCACCACCTCAGGCTCAGACACATCCAGCAATGCAACCTGTCCAACAAAT TCCTCAGGCACAACAAGGACAGCAACAAATGCAGATGAAACAGCAGGAATTGAATTATAC TCAGCTACAGACTCCTGGTGCTATTGATCCCAGTAGGATACAACAGGGCATCCAATCTGC ACAAGAACGTGCTTGGAAAAGTTGAGACTGAAGGTGAATGATAAATTGGTAAGCTGTTAC TCGGAAATGAGCTCCACTCAACCTGCTGCCTCCATCAAATGCCTTGACGGTGCCTGATGC CTGAGTGGTGGCCAAGCGGCCATGCCGATCGTTGTAACTCTGGATATAGCTTAGATTGAT GTCTAAAAAGTTGTAGCTCCAATCCGTGTAAAATGTTTGCAGTCTAGGCCTTGTACCGCT GTAACATTTCTGCTGATTAGAATGTTCGCTTTCCTTGCATAGGCAACTGCCAGAGGTTCG TCGCTAGTATGATTTTGGGCATTTCATGACATGTCCCCAGCAATCATCATTTAGATTGTT TCCTCCTTTGAAAGCTGTTTGCTCTCAAGACATGCTAGATAAGAATAGATTTGGCCGCGG CGGG