Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0123100-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:1780100:1786097:1 gene:Os09g0123100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os09t0123100-01)
Sequence	ATGGAGCCCAAGGAGGCGCCCCCGCCGCCGCCGCCCCAGTCTCCGTCCTCCACCGAGGAG GAAGGGATGCTCTCCGTCACGGCCGCTATGGCCAGAGACGCCGCCGTGCTGTTCCAGAGC CGCCGCTACGCCGACTGCGCCGAGGTGCTCGCGCAGCTCCTGCTCAAGAAGGAGGGCGAC CCCAAGGTCCTTCACAATATGGCTATTGCAGAATCTTTCTTGGATGGTTGTCCTGACCCA AAGAAATTGCTTGAAATTCTAGGCAATGTTAAGAGAAGAAGTGAAGAGCTTGCCTGTGCA TCTAGACAACAAACTGATTCTGCCAATGGGACAGGAAACAGTGTTTCTTCTGGATCAAGA GGGAGTGGCATTATACCTCTGATTTCTGCTGCAAATAATGCGACAACCTATGGGGATGAG TTTGACACAACCATAATAACATTCAACACTGCTGTTATCCTTTACCATCTTCACGATTAT GAATCTGCACTATCTATTTTGGATCCACTCTACCGAAATATTGAACCAATTGATGAGACA ACTGCTCTTCATGTATGCTTTCTGTTGTTGGATATTACATTAGCTTTGCAAGATGCATCG AATGCCGCGGATATAATTCAGTACTTGGAAAGGTCATTTGGAGTAGTTAGCGCAACAAAC CAGAATGAAAATGCTAATACAGCTCAGCAGCAGTCAGCTCAACCAAAGCCTTCTGCAAAG ATTAGCACACCTCCAGATTCTGATTCAAATACTTGTGCTGGTGGATCTGAAAACCTTTCA GCAGGAAATTTTTCTGATGATACACTTGAGTTTGAATCTTTTTACTCTACCTTGGATGGT GGTAATCAGAACTTGGGCAGACCAATTTTAAATGATTTCTCAAGGGCTTCAGCTGATCTT GCTGCCACTGCTGCTGATTTGAAAGTTAGACTGCAAATATACAAGGTCCGGCTTCTGCTT CTTACTAGGAACCTTAAGGTTGCAAAGCGAGAACTGAAAGTTCTGATGAACATGGCACGT GGTAGGGATTCATCAACAGAGCTTCTCCTGAAATCTCAGTTGGAATATGCCAGAGGAAAC TATCGCAAGGCTGTGAAGCTGCTGAGCACACCCAATAATCGGAGTGAACAAGCAATGCTG GCCATGTTCTACAATAATCTTGGTTGCATACTCCACCAACAGAGATCTATTCAAACCTCA GTATGGTGCTTCAGCAAAGCATTGAAATATAGCTTATCACTTCGTTCAGAGAAACCATGC AAGCTGACCGCAATATCGCAAGACAAATCTTGTCTTATTTCATACAACTGCGGCATCCAA CATTTGATGTGCGGGAAACCTTTGTTAGCAGCTCGCTGTTTTCGTGAAGCCATGCCGCTC TTGTGCAACAGGTCCCTCTTTTGGCTCCGTTTTGCTGAGTGTAGCCTGCTAGCTCTGGAA AAGGGTATCCTGACTTCAAGTGGTGCTACTTCGTGCAATGATGAGATTGAAGTTGATGTT ATGGGGTCAGGAAAATGGCGGCACTTAGTTATAAACCCAGTGAAGCCAAGTCATTCTTCA GAATCTGGGGAGGAGGTAAGTTTGGACAAATATGGAAATCTGATATCCCTTAGATTTGCT AGACAGTGTCTACTCAATGCCCAAATTTTATTGGATCCCTCTACGAAGGAAAATCTGGTG ATTGCATCAGGCACAGAGGAATCGAATCAAACATCACTGCAAGGCCAGAAAGGCTCAGGT CAGAAGAACACCACTAATACAGATTCCAAACCGCCTGGTCCAGCACTAACTAATGCAAAT GGAGAACAGAAGGGAATTTCAAACTTGAATGTCACCTTGCAGAGCTCTCTTGCTTTGTAT GATGACATATGTAGAAAAGAGAACCTCAAAATTAAACAAGCCATCTTGGGGGACCTTGCA TTTATTGAGTTGTGTCTTCAGAATCACTTGAAAGCTTTGTCTATTGCCAAGTTGCTACAG CAGCTGCCAGAATGTTCCAGGATGTATGTTTTCCTCAGCCATGTATACGCAGCTGAAGCA CTTTGTGCACTGAATAGACCAAAGGAGGCTGCTGAGCAATTAACTGTTTATTTGAGAGAT GGCGATGATATTGAGTTGCCTTACAGCATTGAGAACTGCGAGAAAGCCCTTGTTGAGAAA GACAGCGATGGTGAAGATTCAGTTGCTCCGGTAGTCACAAAATTGTCCTCAGGAGAATCT CAGTATTCAGAAAGCCTCAAGCCTGAGGAAGCTCAGGGTGTTCTTTATATTGACCTAGGC ATGACAGCTGCAGTGCAGGGAGAGCTTGAGCAGGCTAACTATATGGTAAGCCGTGGCGTT GCCTTGTTGCCCAACAACCCCAGGGCAGTGCTAGCATCAGTTTATGTGGACCTTCTTCAA GGGAAGGCACAAGAAGCAATCGCCAAGTTGAGACGATGTAGAACTGTGAGATTTAGGAGG CATAGTGTAGCAGTCAGCAGTTAA

Peptide Sequence

PEP ID	Os09t0123100-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:1780100:1786097:1 gene:Os09g0123100 transcript:Os09t0123100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os09t0123100-01)
Sequence	MEPKEAPPPPPPQSPSSTEEEGMLSVTAAMARDAAVLFQSRRYADCAEVLAQLLLKKEGD PKVLHNMAIAESFLDGCPDPKKLLEILGNVKRRSEELACASRQQTDSANGTGNSVSSGSR GSGIIPLISAANNATTYGDEFDTTIITFNTAVILYHLHDYESALSILDPLYRNIEPIDET TALHVCFLLLDITLALQDASNAADIIQYLERSFGVVSATNQNENANTAQQQSAQPKPSAK ISTPPDSDSNTCAGGSENLSAGNFSDDTLEFESFYSTLDGGNQNLGRPILNDFSRASADL AATAADLKVRLQIYKVRLLLLTRNLKVAKRELKVLMNMARGRDSSTELLLKSQLEYARGN YRKAVKLLSTPNNRSEQAMLAMFYNNLGCILHQQRSIQTSVWCFSKALKYSLSLRSEKPC KLTAISQDKSCLISYNCGIQHLMCGKPLLAARCFREAMPLLCNRSLFWLRFAECSLLALE KGILTSSGATSCNDEIEVDVMGSGKWRHLVINPVKPSHSSESGEEVSLDKYGNLISLRFA RQCLLNAQILLDPSTKENLVIASGTEESNQTSLQGQKGSGQKNTTNTDSKPPGPALTNAN GEQKGISNLNVTLQSSLALYDDICRKENLKIKQAILGDLAFIELCLQNHLKALSIAKLLQ QLPECSRMYVFLSHVYAAEALCALNRPKEAAEQLTVYLRDGDDIELPYSIENCEKALVEK DSDGEDSVAPVVTKLSSGESQYSESLKPEEAQGVLYIDLGMTAAVQGELEQANYMVSRGV ALLPNNPRAVLASVYVDLLQGKAQEAIAKLRRCRTVRFRRHSVAVSS

Transcript Sequence

Transcript ID	Os09t0123100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:1780100:1786097:1 gene:Os09g0123100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os09t0123100-01)
Sequence	ATCGGCCTTCCTCAGTTGGCAACTCGCTCCACATCCCCCGTCGAGTCTCGCTCTCGCCGC GCCGTCGGTTCCAAACCCTAGCTCTCCCTCCCGGCCCCCCAAATCCTGCCCTCCGGAGCT CCGATTCACCGCCTCGCCGCGCGATTCCGGCCCTACCCTGGCGCCCTGCGCCCCCGATTA GCCCCCATCCTGCTAGATCCACCCGCACAATGGAGCCCAAGGAGGCGCCCCCGCCGCCGC CGCCCCAGTCTCCGTCCTCCACCGAGGAGGAAGGGATGCTCTCCGTCACGGCCGCTATGG CCAGAGACGCCGCCGTGCTGTTCCAGAGCCGCCGCTACGCCGACTGCGCCGAGGTGCTCG CGCAGCTCCTGCTCAAGAAGGAGGGCGACCCCAAGGTCCTTCACAATATGGCTATTGCAG AATCTTTCTTGGATGGTTGTCCTGACCCAAAGAAATTGCTTGAAATTCTAGGCAATGTTA AGAGAAGAAGTGAAGAGCTTGCCTGTGCATCTAGACAACAAACTGATTCTGCCAATGGGA CAGGAAACAGTGTTTCTTCTGGATCAAGAGGGAGTGGCATTATACCTCTGATTTCTGCTG CAAATAATGCGACAACCTATGGGGATGAGTTTGACACAACCATAATAACATTCAACACTG CTGTTATCCTTTACCATCTTCACGATTATGAATCTGCACTATCTATTTTGGATCCACTCT ACCGAAATATTGAACCAATTGATGAGACAACTGCTCTTCATGTATGCTTTCTGTTGTTGG ATATTACATTAGCTTTGCAAGATGCATCGAATGCCGCGGATATAATTCAGTACTTGGAAA GGTCATTTGGAGTAGTTAGCGCAACAAACCAGAATGAAAATGCTAATACAGCTCAGCAGC AGTCAGCTCAACCAAAGCCTTCTGCAAAGATTAGCACACCTCCAGATTCTGATTCAAATA CTTGTGCTGGTGGATCTGAAAACCTTTCAGCAGGAAATTTTTCTGATGATACACTTGAGT TTGAATCTTTTTACTCTACCTTGGATGGTGGTAATCAGAACTTGGGCAGACCAATTTTAA ATGATTTCTCAAGGGCTTCAGCTGATCTTGCTGCCACTGCTGCTGATTTGAAAGTTAGAC TGCAAATATACAAGGTCCGGCTTCTGCTTCTTACTAGGAACCTTAAGGTTGCAAAGCGAG AACTGAAAGTTCTGATGAACATGGCACGTGGTAGGGATTCATCAACAGAGCTTCTCCTGA AATCTCAGTTGGAATATGCCAGAGGAAACTATCGCAAGGCTGTGAAGCTGCTGAGCACAC CCAATAATCGGAGTGAACAAGCAATGCTGGCCATGTTCTACAATAATCTTGGTTGCATAC TCCACCAACAGAGATCTATTCAAACCTCAGTATGGTGCTTCAGCAAAGCATTGAAATATA GCTTATCACTTCGTTCAGAGAAACCATGCAAGCTGACCGCAATATCGCAAGACAAATCTT GTCTTATTTCATACAACTGCGGCATCCAACATTTGATGTGCGGGAAACCTTTGTTAGCAG CTCGCTGTTTTCGTGAAGCCATGCCGCTCTTGTGCAACAGGTCCCTCTTTTGGCTCCGTT TTGCTGAGTGTAGCCTGCTAGCTCTGGAAAAGGGTATCCTGACTTCAAGTGGTGCTACTT CGTGCAATGATGAGATTGAAGTTGATGTTATGGGGTCAGGAAAATGGCGGCACTTAGTTA TAAACCCAGTGAAGCCAAGTCATTCTTCAGAATCTGGGGAGGAGGTAAGTTTGGACAAAT ATGGAAATCTGATATCCCTTAGATTTGCTAGACAGTGTCTACTCAATGCCCAAATTTTAT TGGATCCCTCTACGAAGGAAAATCTGGTGATTGCATCAGGCACAGAGGAATCGAATCAAA CATCACTGCAAGGCCAGAAAGGCTCAGGTCAGAAGAACACCACTAATACAGATTCCAAAC CGCCTGGTCCAGCACTAACTAATGCAAATGGAGAACAGAAGGGAATTTCAAACTTGAATG TCACCTTGCAGAGCTCTCTTGCTTTGTATGATGACATATGTAGAAAAGAGAACCTCAAAA TTAAACAAGCCATCTTGGGGGACCTTGCATTTATTGAGTTGTGTCTTCAGAATCACTTGA AAGCTTTGTCTATTGCCAAGTTGCTACAGCAGCTGCCAGAATGTTCCAGGATGTATGTTT TCCTCAGCCATGTATACGCAGCTGAAGCACTTTGTGCACTGAATAGACCAAAGGAGGCTG CTGAGCAATTAACTGTTTATTTGAGAGATGGCGATGATATTGAGTTGCCTTACAGCATTG AGAACTGCGAGAAAGCCCTTGTTGAGAAAGACAGCGATGGTGAAGATTCAGTTGCTCCGG TAGTCACAAAATTGTCCTCAGGAGAATCTCAGTATTCAGAAAGCCTCAAGCCTGAGGAAG CTCAGGGTGTTCTTTATATTGACCTAGGCATGACAGCTGCAGTGCAGGGAGAGCTTGAGC AGGCTAACTATATGGTAAGCCGTGGCGTTGCCTTGTTGCCCAACAACCCCAGGGCAGTGC TAGCATCAGTTTATGTGGACCTTCTTCAAGGGAAGGCACAAGAAGCAATCGCCAAGTTGA GACGATGTAGAACTGTGAGATTTAGGAGGCATAGTGTAGCAGTCAGCAGTTAAGATAGGA CCGGTCGCCCTTTTGATGATTTCTGTAGTTGATAATTGCCATTTCATCTTTTGGACCCTG ACCCCCAGGTGGATGATCGAAGATCGTAATGTTCTTGTGTGTACCATACATAAGAAGAAG AAAAACTGTAGATCTCCCCCCCTTTCCCCACTTTAAAAGCTTTCCCTGATTCAGGGGTGT AATGTGTCGGAGTTAATATCGTTTTAGTTTTGCCGCTCTTTGGACAGAAGAGGGATGAAA TAGTTTACGATATATGTGCTTATTGTTCGGGAAAGCAACGTGCAAAATCTTTTGAACCCG ATGACC