Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0121050-00
CDS Infomation	cds chromosome:IRGSP-1.0:9:1642224:1656255:1 gene:Os09g0121050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SMC6 protein. (Os09t0121050-00)
Sequence	ATGATGGAGCTTGATGAATTACAACAGAAGATAAAGAATATGGAACATATAGAGGAGATA GCACATGAAATTGATAACTTAAAGAAAAAGTTGGCCTGGTCCTGGGTTTATGATGTTGAC AGACAAATTGAAGAACAAACAGTAAAACTTCTGAAACTGAAAGAGCGAATTCCCGCCTGC CAAGAAAAAATTGATGGACATGCAGCCATGATAGTCAAATTGAAGGAAGAATTAACAGAT AAGGAAAGAAATGCCAGATCTTTGGTAGAAAAGTCACGTGAAGTAACCATGATGAAAGAA AAACTGGAGGATGACATTGCTCAGGCTGTTGCACTGAAGATTGAACTAGAGAGAGAGCAT GTACGTGGTACAAATGTGCTAAAGAATATGAACAATCGTGTGAAACAACTCCAGAAACAA ATTCATGATTTCCGGGAGCAGTATATTCAATACACGCAGGATGAATCATCTAAAGCTGAG AACGACAAGTGTGAAATACAGAAGGAGATAAATTCTCTTCATTCAAATGTTACAAGGTTA AAAGAGGAAGAAAGAGGGTTGCATGAAACACAAATGGGCATTGTAAAATCCATCCAAAAC ATGGAAACAGAGATAGTTGAAAACAGAAAGAAGATTACTCAATTTAAAGCTCACATTCGT GATCTTCAACAACGTCAATCTGATAAGGTATCAACATTTGGGGGACAGAGAGTTCGGAAC CTCTTGAAGTCAATAGAAAGACAGGAAAGAAGATTCAACATCCCGCCTCTTGGTCCTATA GGAGTTCATGTGAAACTGGCTAGCGAATCCTGGTCTTTTGCAGTTGAGTGTGCATTGGGG AGGCTACTGGATGCTTTTATCGTCTCCTGTCACAGAGATTCAGTCATTTTGCGGGAATGT GCGAAAGAAGTTAACTACCATAACCTTCAAATCATTATATATGATTTTGCGAAGCCAAGA CTGAACATTCCAGATCATTTACTTCCTTCGACAACACATCCAACAGTACTTTCAGTTATT CAGTCGGAAAATCCTACTGTGCTAAATGTTTTGGTGGATCAGGGTAGCGCTGAAAGAACA GTCCTAGTTCGAGACTATGAAGTGGGCAGATCTGTTGCATTTGATAATAGGATACAAAAT CTGAAGGACGTGTATACTTCCGATGGGTACAAAATGTTTTCAAGAGGTCCTGTTCAGACC ATTCTTCCACCACACAGAAAGGGAAATGCAGGTCGTTTGTGTACTTCACTGGGAGAAAAA ATAGCTGAAATGGAATCAGAAATTGCTGACATGGAGAGAATAATCTCACAAAGGACTCGG GATATGAAGAAGCCAAATGATAAACGAGAAGATATCGAATTAAAAATAAAGAATTTGAAG AGAAAACGAGTAGAAGAGGAGCGTCTTCTTGAGAGCAAAAAAGTTCAATTGGATGACATC AGGAAGACTTCTGCTGACATTAATCGTGTTACATCGTCGGATACCAGTGAACTAGAGGCA GAAATGATGCAAGTGGAAGTCGACATTGAGCAGAAAGAATTGTTAGTGCAGAAAACCAAT TTAAGGTTAACAAAAGCTTTGCAGGATGAGAATGACCGGAGAGCCTGTTACAAGGAATTC ATTGTTTTTCATATTGAAACTCTAGCATGTAAGTTTGCCTATTAA

Peptide Sequence

PEP ID	Os09t0121050-00
PEP Infomation	pep chromosome:IRGSP-1.0:9:1642224:1656255:1 gene:Os09g0121050 transcript:Os09t0121050-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SMC6 protein. (Os09t0121050-00)
Sequence	MMELDELQQKIKNMEHIEEIAHEIDNLKKKLAWSWVYDVDRQIEEQTVKLLKLKERIPAC QEKIDGHAAMIVKLKEELTDKERNARSLVEKSREVTMMKEKLEDDIAQAVALKIELEREH VRGTNVLKNMNNRVKQLQKQIHDFREQYIQYTQDESSKAENDKCEIQKEINSLHSNVTRL KEEERGLHETQMGIVKSIQNMETEIVENRKKITQFKAHIRDLQQRQSDKVSTFGGQRVRN LLKSIERQERRFNIPPLGPIGVHVKLASESWSFAVECALGRLLDAFIVSCHRDSVILREC AKEVNYHNLQIIIYDFAKPRLNIPDHLLPSTTHPTVLSVIQSENPTVLNVLVDQGSAERT VLVRDYEVGRSVAFDNRIQNLKDVYTSDGYKMFSRGPVQTILPPHRKGNAGRLCTSLGEK IAEMESEIADMERIISQRTRDMKKPNDKREDIELKIKNLKRKRVEEERLLESKKVQLDDI RKTSADINRVTSSDTSELEAEMMQVEVDIEQKELLVQKTNLRLTKALQDENDRRACYKEF IVFHIETLACKFAY

Transcript Sequence

Transcript ID	Os09t0121050-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:1642224:1656255:1 gene:Os09g0121050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SMC6 protein. (Os09t0121050-00)
Sequence	ATGATGGAGCTTGATGAATTACAACAGAAGATAAAGAATATGGAACATATAGAGGAGATA GCACATGAAATTGATAACTTAAAGAAAAAGTTGGCCTGGTCCTGGGTTTATGATGTTGAC AGACAAATTGAAGAACAAACAGTAAAACTTCTGAAACTGAAAGAGCGAATTCCCGCCTGC CAAGAAAAAATTGATGGACATGCAGCCATGATAGTCAAATTGAAGGAAGAATTAACAGAT AAGGAAAGAAATGCCAGATCTTTGGTAGAAAAGTCACGTGAAGTAACCATGATGAAAGAA AAACTGGAGGATGACATTGCTCAGGCTGTTGCACTGAAGATTGAACTAGAGAGAGAGCAT GTACGTGGTACAAATGTGCTAAAGAATATGAACAATCGTGTGAAACAACTCCAGAAACAA ATTCATGATTTCCGGGAGCAGTATATTCAATACACGCAGGATGAATCATCTAAAGCTGAG AACGACAAGTGTGAAATACAGAAGGAGATAAATTCTCTTCATTCAAATGTTACAAGGTTA AAAGAGGAAGAAAGAGGGTTGCATGAAACACAAATGGGCATTGTAAAATCCATCCAAAAC ATGGAAACAGAGATAGTTGAAAACAGAAAGAAGATTACTCAATTTAAAGCTCACATTCGT GATCTTCAACAACGTCAATCTGATAAGGTATCAACATTTGGGGGACAGAGAGTTCGGAAC CTCTTGAAGTCAATAGAAAGACAGGAAAGAAGATTCAACATCCCGCCTCTTGGTCCTATA GGAGTTCATGTGAAACTGGCTAGCGAATCCTGGTCTTTTGCAGTTGAGTGTGCATTGGGG AGGCTACTGGATGCTTTTATCGTCTCCTGTCACAGAGATTCAGTCATTTTGCGGGAATGT GCGAAAGAAGTTAACTACCATAACCTTCAAATCATTATATATGATTTTGCGAAGCCAAGA CTGAACATTCCAGATCATTTACTTCCTTCGACAACACATCCAACAGTACTTTCAGTTATT CAGTCGGAAAATCCTACTGTGCTAAATGTTTTGGTGGATCAGGGTAGCGCTGAAAGAACA GTCCTAGTTCGAGACTATGAAGTGGGCAGATCTGTTGCATTTGATAATAGGATACAAAAT CTGAAGGACGTGTATACTTCCGATGGGTACAAAATGTTTTCAAGAGGTCCTGTTCAGACC ATTCTTCCACCACACAGAAAGGGAAATGCAGGTCGTTTGTGTACTTCACTGGGAGAAAAA ATAGCTGAAATGGAATCAGAAATTGCTGACATGGAGAGAATAATCTCACAAAGGACTCGG GATATGAAGAAGCCAAATGATAAACGAGAAGATATCGAATTAAAAATAAAGAATTTGAAG AGAAAACGAGTAGAAGAGGAGCGTCTTCTTGAGAGCAAAAAAGTTCAATTGGATGACATC AGGAAGACTTCTGCTGACATTAATCGTGTTACATCGTCGGATACCAGTGAACTAGAGGCA GAAATGATGCAAGTGGAAGTCGACATTGAGCAGAAAGAATTGTTAGTGCAGAAAACCAAT TTAAGGTTAACAAAAGCTTTGCAGGATGAGAATGACCGGAGAGCCTGTTACAAGGAATTC ATTGTTTTTCATATTGAAACTCTAGCATGTAAGTTTGCCTATTAAATTTACTTTATTAGT TCTTGTTTCGTTGAATATTTTAATTTTACCAGGGCAAGGCTTACTATGAAGGTATAATGG AAACTAAAGTTTTACCTGATATTAAAATTGCTGAAGCAGAGTTTGAAGATCTTCAGAAGC TTCAGCAGGAGAGCTTCAAGAAGGCATCAATTATATGCTCTGAGAGTGATGTGGAAACTC TGGGAGGTGTGGCTGGATCCTCACCAGAACAACTAAGTGCTACGATAAATAAATTGGAAC TGAGATTTCATAAAGAAAGTAGCAGATATACTGAGTCCATTGATGATCTGAGAGCATTGC ATATCAAGAAGAAAGAGAAAATTGAAGATAAACAGCAATTATATGCAGGTTTTAGGGATA AGTTGAATTCGTGTCAAAAAGCTTTGGACATGCGATGGAAGAAATTTCAGAGAAATGCTG CTCTTTTGAAGCGACAGCTTACGTGGTTGTTCAACGAGCACCTAGGGAAGAAAGGGATAA GTGGGTTTATCAATGTTGATTATAAGGAAAGACTTCTGTCTGTCGAGCTCACGATGCCTC AAGATTCTTCTCGTGACACAATTACAGACACCAGAGGACTTTCAGGTGGAGAAAGATCAT TTTCGACACTGTGTTTTACCTTGGCTCTTCACGGAATGACAGAGGCTCCTTTTAGGGCCA TGGATGAGTTTGATGTATTCATGGATGCAGTAAGCCGCAAGATAAGCCTAGACACCCTAG TAGATTTCGCCGTCACGCAAGGATCACAGTGGATATTTATAACACCACATGATATCAGCA TGGTGCAACCTGGAGACAGGATCAAGAAGCAGCAAATGGCTGCCCCACGCGGTTGACATC AGTATGTTCAGCGCCTTGTATATATATATATATATATCGTATCCT