Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0116400-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:1299752:1312021:1 gene:Os09g0116400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 111, BRI1-interacting protein 111, brassinosteroid receptor kinase-interacting protein 111 description:CCAAT-binding factor domain containing protein. (Os09t0116400-01);Similar to predicted protein. (Os09t0116400-02)
Sequence	TCGGCAAAGTCTGGCACATCTGCTGATAAGGTTTCAGCATTCACATGCCTTATCGAAGAC AATCCAATTGCAAACATGAGGGCACTCGATTCTCTCCTTGGTATGGTTACATCAAAGGTT GGTAAAAGGTATGCGTTCACAGGGTTTGATGCATTGAAGGAGTTGTTCCTCAAAAGGGTA TTACCTGATCGTAAGTTGAAAAGTCTTATTCAGCACCCATTAGATATTTTACCAGAAACA AAAGATGGCTACTCACTTCTCCTCTTCTGGTATTGGGAGGACTGCTTGAAACAGAGGTAC GAGAAGTTTGTTATTGCATTGGAGGACGCATTAAAAGATATGCTGCCAAATCTTAAGGAC AAAGCAATGAAGACGGTTTTTATCCTTTTAAAGGAAAAGGCAGAACAGGAACGCCGGTTA CTTACAGCTCTTGTTAACAAACTTGGAGATCCTGAAAGGAGAGCAGCCTCAAGTGCGGCA TATCTGTTAACAAGTCTCCTATCTGCTCATCCAAATATGAAGATGGTTGTGATAGATGAG GTGGACTCATTTCTCTTTCGGCCACATGTTGGTCTTAGGGCCAAATACCAAGCTGTCAAC TTTTTGAGCCAGATTTTTCTTACCAGTAAGGGTGATGGCCCGAAAATAGCCAAGCGTTTG GTGGATGTTTACATTGCGCTTTTCAAGGTACTCATGTCTTGCTCTCGTGCTACTGAAGGA GTTAAACACAGCAAATATGGCAAGAAAACTAATGAAAATGGGAAAAAGGAAAAGGGCAAT GACTTCAATTCTCATGTAAAGCATGAAGACCCTTGTGCAGGATCAGATTTAGAGATGGAC TCTAGGATTCTCTCTGCACTTTTAACTGGGGTTAATAGAGCATTACCATATGTTGCAAGC TCAGAAGTTGATGATATTGTGGAAGTTCAGACACCAATTCTTTTTAGATTGGTGCACTCT GTAAATTTCAATGTTGGTGTACAGGCATTAATGCTTTTGTACCAAATATCTACAAAAAAT CAGATCGCAAGCGACCGTTTTTACCGTGCACTGTATGCAAAACTTTTGAGTCCTGCATCC GTAACCTCGTCAAAGCCAGAATTATTTCTTGGTTTATTGGTGAAAGCAATGAAAAATGAT GTCATGTTAAAGAGAGTGGCTGCATTTGCAAAGCGGTTGCTGCAGGTTGCTCTTCAGCGG CCTCCTCAATATGCTTGCGGATGCCTTTTCATACTGTCAGAGGTCCTTAAAGCAAAGCCA CCATTGTGGGCAATTGTGCTCCAGAATGAATCTGTTGATGATGGTATTGAGCACTTTGAA GACATAGTAGAGAATACTGATTGTCCAGCTATTACCTCAAGAACTACAGATAAATGCAAT GACATATTAGCTACTCTTGAGAAATGCAATTCAGATGCTGAGGATGCCTGTGATACTATA GAATGTGTAAGTCCAATCTCAAGTGGTGAGAAAGATGGAAAAGGCACATCAGCTGAGGGG TTGACACTTCAGGCATCTTATAATCCACGACACAGAGAGCCTTCTTACTGTAATGCAGAC CATGCCAGTTGGTGGGAGCTTACTGCACTGGCCTTACATGTGCACCCATCGGTATCTACT ATGGCTAGGACATTGCTATCTGGTAACAATATCGTTTATAGTGGTGATCCATTGACAGAC CTATCACTCCCTGCTTTCCTTGACAAATTCATGGAGAAGAAACCAAAAGGAAACCGCATC GCTGAAGGGAAATGGCATGGTGGATCCCAAATTGCACCAGCTAAAAAGCTTGATCAAAGT CATCATCTCATTGGAGAAGAGCTACTAGAACTGGTAGAAAAGGAAGTTCCTCCTGAAGAT GTTGTTTTCCATCGTTTCTACATGAACAAGACTGGCCCTATTAAACCTAAAGCAAAGAAG AAAACCGCGGTTCTGGATGAAGATACTGGAGAGCTCTTTGCTGATGATGTAGATGATGCT AGTGATGAAAGTGATGATGAAATGCAGGAGCTGGGAATTGGGTCGATAGAAGATGGAGAA TATGATTATGATAATCTGGATGCAACCACATTTGAGGAGGAAGGGGATTTGCTTAGATAT GACAGTGATGTTGAGTTGCATGACATTTCAGATGATATCTCTTCTGGAGCAGATTCTGAT ACTGAAGCCCTTGAAGGTGCTAACCATTCAGATGGCAATGACAGTGATGGAGAGG

Peptide Sequence

PEP ID	Os09t0116400-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:1299752:1312021:1 gene:Os09g0116400 transcript:Os09t0116400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 111, BRI1-interacting protein 111, brassinosteroid receptor kinase-interacting protein 111 description:CCAAT-binding factor domain containing protein. (Os09t0116400-01);Similar to predicted protein. (Os09t0116400-02)
Sequence	SAKSGTSADKVSAFTCLIEDNPIANMRALDSLLGMVTSKVGKRYAFTGFDALKELFLKRV LPDRKLKSLIQHPLDILPETKDGYSLLLFWYWEDCLKQRYEKFVIALEDALKDMLPNLKD KAMKTVFILLKEKAEQERRLLTALVNKLGDPERRAASSAAYLLTSLLSAHPNMKMVVIDE VDSFLFRPHVGLRAKYQAVNFLSQIFLTSKGDGPKIAKRLVDVYIALFKVLMSCSRATEG VKHSKYGKKTNENGKKEKGNDFNSHVKHEDPCAGSDLEMDSRILSALLTGVNRALPYVAS SEVDDIVEVQTPILFRLVHSVNFNVGVQALMLLYQISTKNQIASDRFYRALYAKLLSPAS VTSSKPELFLGLLVKAMKNDVMLKRVAAFAKRLLQVALQRPPQYACGCLFILSEVLKAKP PLWAIVLQNESVDDGIEHFEDIVENTDCPAITSRTTDKCNDILATLEKCNSDAEDACDTI ECVSPISSGEKDGKGTSAEGLTLQASYNPRHREPSYCNADHASWWELTALALHVHPSVST MARTLLSGNNIVYSGDPLTDLSLPAFLDKFMEKKPKGNRIAEGKWHGGSQIAPAKKLDQS HHLIGEELLELVEKEVPPEDVVFHRFYMNKTGPIKPKAKKKTAVLDEDTGELFADDVDDA SDESDDEMQELGIGSIEDGEYDYDNLDATTFEEEGDLLRYDSDVELHDISDDISSGADSD TEALEGANHSDGNDSDGE

Transcript Sequence

Transcript ID	Os09t0116400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:1299752:1312021:1 gene:Os09g0116400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 111, BRI1-interacting protein 111, brassinosteroid receptor kinase-interacting protein 111 description:CCAAT-binding factor domain containing protein. (Os09t0116400-01);Similar to predicted protein. (Os09t0116400-02)
Sequence	TATCGGCAAAGTCTGGCACATCTGCTGATAAGGTTTCAGCATTCACATGCCTTATCGAAG ACAATCCAATTGCAAACATGAGGGCACTCGATTCTCTCCTTGGTATGGTTACATCAAAGG TTGGTAAAAGGTATGCGTTCACAGGGTTTGATGCATTGAAGGAGTTGTTCCTCAAAAGGG TATTACCTGATCGTAAGTTGAAAAGTCTTATTCAGCACCCATTAGATATTTTACCAGAAA CAAAAGATGGCTACTCACTTCTCCTCTTCTGGTATTGGGAGGACTGCTTGAAACAGAGGT ACGAGAAGTTTGTTATTGCATTGGAGGACGCATTAAAAGATATGCTGCCAAATCTTAAGG ACAAAGCAATGAAGACGGTTTTTATCCTTTTAAAGGAAAAGGCAGAACAGGAACGCCGGT TACTTACAGCTCTTGTTAACAAACTTGGAGATCCTGAAAGGAGAGCAGCCTCAAGTGCGG CATATCTGTTAACAAGTCTCCTATCTGCTCATCCAAATATGAAGATGGTTGTGATAGATG AGGTGGACTCATTTCTCTTTCGGCCACATGTTGGTCTTAGGGCCAAATACCAAGCTGTCA ACTTTTTGAGCCAGATTTTTCTTACCAGTAAGGGTGATGGCCCGAAAATAGCCAAGCGTT TGGTGGATGTTTACATTGCGCTTTTCAAGGTACTCATGTCTTGCTCTCGTGCTACTGAAG GAGTTAAACACAGCAAATATGGCAAGAAAACTAATGAAAATGGGAAAAAGGAAAAGGGCA ATGACTTCAATTCTCATGTAAAGCATGAAGACCCTTGTGCAGGATCAGATTTAGAGATGG ACTCTAGGATTCTCTCTGCACTTTTAACTGGGGTTAATAGAGCATTACCATATGTTGCAA GCTCAGAAGTTGATGATATTGTGGAAGTTCAGACACCAATTCTTTTTAGATTGGTGCACT CTGTAAATTTCAATGTTGGTGTACAGGCATTAATGCTTTTGTACCAAATATCTACAAAAA ATCAGATCGCAAGCGACCGTTTTTACCGTGCACTGTATGCAAAACTTTTGAGTCCTGCAT CCGTAACCTCGTCAAAGCCAGAATTATTTCTTGGTTTATTGGTGAAAGCAATGAAAAATG ATGTCATGTTAAAGAGAGTGGCTGCATTTGCAAAGCGGTTGCTGCAGGTTGCTCTTCAGC GGCCTCCTCAATATGCTTGCGGATGCCTTTTCATACTGTCAGAGGTCCTTAAAGCAAAGC CACCATTGTGGGCAATTGTGCTCCAGAATGAATCTGTTGATGATGGTATTGAGCACTTTG AAGACATAGTAGAGAATACTGATTGTCCAGCTATTACCTCAAGAACTACAGATAAATGCA ATGACATATTAGCTACTCTTGAGAAATGCAATTCAGATGCTGAGGATGCCTGTGATACTA TAGAATGTGTAAGTCCAATCTCAAGTGGTGAGAAAGATGGAAAAGGCACATCAGCTGAGG GGTTGACACTTCAGGCATCTTATAATCCACGACACAGAGAGCCTTCTTACTGTAATGCAG ACCATGCCAGTTGGTGGGAGCTTACTGCACTGGCCTTACATGTGCACCCATCGGTATCTA CTATGGCTAGGACATTGCTATCTGGTAACAATATCGTTTATAGTGGTGATCCATTGACAG ACCTATCACTCCCTGCTTTCCTTGACAAATTCATGGAGAAGAAACCAAAAGGAAACCGCA TCGCTGAAGGGAAATGGCATGGTGGATCCCAAATTGCACCAGCTAAAAAGCTTGATCAAA GTCATCATCTCATTGGAGAAGAGCTACTAGAACTGGTAGAAAAGGAAGTTCCTCCTGAAG ATGTTGTTTTCCATCGTTTCTACATGAACAAGACTGGCCCTATTAAACCTAAAGCAAAGA AGAAAACCGCGGTTCTGGATGAAGATACTGGAGAGCTCTTTGCTGATGATGTAGATGATG CTAGTGATGAAAGTGATGATGAAATGCAGGAGCTGGGAATTGGGTCGATAGAAGATGGAG AATATGATTATGATAATCTGGATGCAACCACATTTGAGGAGGAAGGGGATTTGCTTAGAT ATGACAGTGATGTTGAGTTGCATGACATTTCAGATGATATCTCTTCTGGAGCAGATTCTG ATACTGAAGCCCTTGAAGGTGCTAACCATTCAGATGGCAATGACAGTGATGGAGAGG