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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0116000-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:1272405:1272962:-1 gene:Os09g0116000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 77 description:Transcription factor, MADS-box domain containing protein. (Os09t0116000-00)
Sequence

ATGGTGGCGAGTAGGCGGAAGATGGAGAGCGAGGAGGCACGGAAGGTGTGCTTCTCCAAG
CGCCGTGCGGACCTCTTCAAGATGGCGAGCGAGCTGTCCGTTCATTTCAACGCCGACGTG
GCGGCTGTCGTCTTCTCCCCCGCCGGCAACAGGGCCTACTCCATCGGCGACCCGTCGGTC
ATGGACCGCTTCCTGTCGTCGTTGCCGGCGCCGGCGCCGCCGGCGGAGACCGAGCCAGAG
CCAGAGGTGGATTGGTCGGTGATGGAGGAGCTGAGCAGGCTGTGTGGCCAGCTGCAGGCC
ATGGTGGACGCGCACAAGGCGCGCCTGGAGAAGGCGGAGGAGAAGCTTCGCGAGAGCGGC
GCGGCGGCGTGGATGATGGATCTGGAGGCGGAGGTGGGTCGCATGGCGCCGGAGGATGTG
CTGGCCCTGGTGACTAAGCTGGCGGTGCTGCGGGACGGCGTGGCGGAGCGCGCCCACGAG
ATGCTGCGCGAGGCGCTGCTCGCTGTCGCTGCCCCGACCCCGACCACCCCCACCACCCCG
CCGCCCGCGGGCTTCTGA

Peptide Sequence

PEP ID

Os09t0116000-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:1272405:1272962:-1 gene:Os09g0116000 transcript:Os09t0116000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 77 description:Transcription factor, MADS-box domain containing protein. (Os09t0116000-00)
Sequence

MVASRRKMESEEARKVCFSKRRADLFKMASELSVHFNADVAAVVFSPAGNRAYSIGDPSV
MDRFLSSLPAPAPPAETEPEPEVDWSVMEELSRLCGQLQAMVDAHKARLEKAEEKLRESG
AAAWMMDLEAEVGRMAPEDVLALVTKLAVLRDGVAERAHEMLREALLAVAAPTPTTPTTP
PPAGF

Transcript Sequence

Transcript ID

Os09t0116000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:1272405:1272962:-1 gene:Os09g0116000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 77 description:Transcription factor, MADS-box domain containing protein. (Os09t0116000-00)
Sequence

ATGGTGGCGAGTAGGCGGAAGATGGAGAGCGAGGAGGCACGGAAGGTGTGCTTCTCCAAG
CGCCGTGCGGACCTCTTCAAGATGGCGAGCGAGCTGTCCGTTCATTTCAACGCCGACGTG
GCGGCTGTCGTCTTCTCCCCCGCCGGCAACAGGGCCTACTCCATCGGCGACCCGTCGGTC
ATGGACCGCTTCCTGTCGTCGTTGCCGGCGCCGGCGCCGCCGGCGGAGACCGAGCCAGAG
CCAGAGGTGGATTGGTCGGTGATGGAGGAGCTGAGCAGGCTGTGTGGCCAGCTGCAGGCC
ATGGTGGACGCGCACAAGGCGCGCCTGGAGAAGGCGGAGGAGAAGCTTCGCGAGAGCGGC
GCGGCGGCGTGGATGATGGATCTGGAGGCGGAGGTGGGTCGCATGGCGCCGGAGGATGTG
CTGGCCCTGGTGACTAAGCTGGCGGTGCTGCGGGACGGCGTGGCGGAGCGCGCCCACGAG
ATGCTGCGCGAGGCGCTGCTCGCTGTCGCTGCCCCGACCCCGACCACCCCCACCACCCCG
CCGCCCGCGGGCTTCTGA