Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0115600-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:1226602:1238465:-1 gene:Os09g0115600 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os09t0115600-01);PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os09t0115600-02)
Sequence	ATGGCGGGCCTCCCCTTTCTCCTCGCGCTCCACATCGCACTGCTGCTGCTTCTTCCCTGC TCCTGCCAGGTTGGGGATTCGTGCTCGTCGGCGCGCGACTGCGGCGCCGGCCTCTACTGC GGCAATTGCGCCGCCACCGGCAAGACCCGGCCGTCCTGCATCAGAGACCTGGCGATCCAG CCTACCTCCATTGTGAAGGGACTGCCCTTCAACCGCTACTCATGGCTGGTCACCCACAAC TCCTTCTCCATCATAGGCGAGCCGTCGCACACCGGAGTCGAGAGGGTCACGTTCTACAAC CAGGAGGACACTGTCACTAACCAATTGAGGAATGGAGTGAGGGGATTGATGCTGGATATG TATGACTTCAATGATGATATCTGGCTCTGCCACTCCTTGCAAGGCCAATGCTACAACTTC ACTGCTTTTCAACCAGCAATTGACACATTGAAAGAGGTGGAAGCATTTCTATCTGAGAAT CCGACAGAGATAATAACAATATTCATTGAGGATTACGTCCATTCAACGATGGGATTGAGC AAATTGTTTACTGCTGCTGACTTGACGAAATATTGGTACCCTATCTCAGAAATGCCAACT AATGGAAAGGACTGGCCAAGTGTCACAGATATGGTTGCAAAGAACCACAGGTTGCTAGTG TTTACTTCTGATTCTTCAAAGGAGGCTAGCGAAGGAATAGCATACCAGTGGAGTTATCTG CTGGAGAATGAGTCTGGAGATCCAGGGATCACTGGTTCTTGTCCAAATAGAAAGGAATCA CAACCACTAAACTCAAGATCTGCATCTCTGTTTATGCAAAATTACTTCCCCACAATTCCT GTAGAGAATGAAGCGTGTAAAGAGAATTCTGTTGGACTACCACAGATGGTCCAAACTTGC TATACTGCAGCTGGAAATAGAATCCCTAACTTCATAGCTGTGAATTACTACATGCGAAGC GATGGTGGGGGTGTTTTTGATGTTCAAGACAGGATCAATGGCGTGACACTATGTGGCTGC AACACCATTGCTGCTTGCCAGGCTGGGGCACCAGCGGGCGCATGCAAGGACACCGGAGCC CCTAACCGGACTTCCTCTTCTGTAAATGGAAACGTATATTCAGGAACTATAGAATTCAAG TCACCTGCTTCAGCAGCCAGCATTTCGAATGCTAACATCCCTAGTAAATTTGTTGGTTTG CTACTGCTAGGTCTTGTGTTGATCATTAAGCCGTTTTGA

Peptide Sequence

PEP ID	Os09t0115600-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:1226602:1238465:-1 gene:Os09g0115600 transcript:Os09t0115600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os09t0115600-01);PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os09t0115600-02)
Sequence	MAGLPFLLALHIALLLLLPCSCQVGDSCSSARDCGAGLYCGNCAATGKTRPSCIRDLAIQ PTSIVKGLPFNRYSWLVTHNSFSIIGEPSHTGVERVTFYNQEDTVTNQLRNGVRGLMLDM YDFNDDIWLCHSLQGQCYNFTAFQPAIDTLKEVEAFLSENPTEIITIFIEDYVHSTMGLS KLFTAADLTKYWYPISEMPTNGKDWPSVTDMVAKNHRLLVFTSDSSKEASEGIAYQWSYL LENESGDPGITGSCPNRKESQPLNSRSASLFMQNYFPTIPVENEACKENSVGLPQMVQTC YTAAGNRIPNFIAVNYYMRSDGGGVFDVQDRINGVTLCGCNTIAACQAGAPAGACKDTGA PNRTSSSVNGNVYSGTIEFKSPASAASISNANIPSKFVGLLLLGLVLIIKPF

Transcript Sequence

Transcript ID	Os09t0115600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:1226602:1238465:-1 gene:Os09g0115600 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os09t0115600-01);PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os09t0115600-02)
Sequence	GCGACGCCGGCATCAGTAATTGAGCGCCGCGGCGGCGGAGGCGGGCGAGGCTGCAGACGC CGACGAGGGCTGAGCCGGACCCACCCACCCACCGAGCGCCGTGGCTTGGGCGGCCGGGGA GAGGGAGGGAGTGGTTGGTGAGCTCTAATGGCGGGCCTCCCCTTTCTCCTCGCGCTCCAC ATCGCACTGCTGCTGCTTCTTCCCTGCTCCTGCCAGGTTGGGGATTCGTGCTCGTCGGCG CGCGACTGCGGCGCCGGCCTCTACTGCGGCAATTGCGCCGCCACCGGCAAGACCCGGCCG TCCTGCATCAGAGACCTGGCGATCCAGCCTACCTCCATTGTGAAGGGACTGCCCTTCAAC CGCTACTCATGGCTGGTCACCCACAACTCCTTCTCCATCATAGGCGAGCCGTCGCACACC GGAGTCGAGAGGGTCACGTTCTACAACCAGGAGGACACTGTCACTAACCAATTGAGGAAT GGAGTGAGGGGATTGATGCTGGATATGTATGACTTCAATGATGATATCTGGCTCTGCCAC TCCTTGCAAGGCCAATGCTACAACTTCACTGCTTTTCAACCAGCAATTGACACATTGAAA GAGGTGGAAGCATTTCTATCTGAGAATCCGACAGAGATAATAACAATATTCATTGAGGAT TACGTCCATTCAACGATGGGATTGAGCAAATTGTTTACTGCTGCTGACTTGACGAAATAT TGGTACCCTATCTCAGAAATGCCAACTAATGGAAAGGACTGGCCAAGTGTCACAGATATG GTTGCAAAGAACCACAGGTTGCTAGTGTTTACTTCTGATTCTTCAAAGGAGGCTAGCGAA GGAATAGCATACCAGTGGAGTTATCTGCTGGAGAATGAGTCTGGAGATCCAGGGATCACT GGTTCTTGTCCAAATAGAAAGGAATCACAACCACTAAACTCAAGATCTGCATCTCTGTTT ATGCAAAATTACTTCCCCACAATTCCTGTAGAGAATGAAGCGTGTAAAGAGAATTCTGTT GGACTACCACAGATGGTCCAAACTTGCTATACTGCAGCTGGAAATAGAATCCCTAACTTC ATAGCTGTGAATTACTACATGCGAAGCGATGGTGGGGGTGTTTTTGATGTTCAAGACAGG ATCAATGGCGTGACACTATGTGGCTGCAACACCATTGCTGCTTGCCAGGCTGGGGCACCA GCGGGCGCATGCAAGGACACCGGAGCCCCTAACCGGACTTCCTCTTCTGTAAATGGAAAC GTATATTCAGGAACTATAGAATTCAAGTCACCTGCTTCAGCAGCCAGCATTTCGAATGCT AACATCCCTAGTAAATTTGTTGGTTTGCTACTGCTAGGTCTTGTGTTGATCATTAAGCCG TTTTGATCTTTCAGGCATTCTTTTTTTCTTTTGATGAGTTTGCCACGTTTCTTTTTCGTT TTTAATGTCTCCTATGTGATGGGATTACAATTACAGTAAGTAATCTTGTTAGCCATCTAG GCTAGAATAGATTCAGAGAGTTACGGTCTGGTCTGTTTGGCTGTCTGACCTGAGAAATTT CCTCTCATGCCTGCTCGATATGTTCTAGGCTAGCACCTTACGTTGTACCCATCACGAAGT AATACAAAGAAATTGAATGGATTAATGGTCCTATGGGTTGGCACC