Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0115400-04
CDS Infomation	cds chromosome:IRGSP-1.0:9:1213048:1215869:-1 gene:Os09g0115400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Polyadenylate-binding protein description:Similar to Poly(A)-binding protein. (Os09t0115400-01);Hypothetical conserved gene. (Os09t0115400-03);Hypothetical conserved gene. (Os09t0115400-04)
Sequence	TTGGATGATAGTGTTGATGATGATAAGTTGAGGGAGCTTTTTGCTGAGTATGGCACTATT ACTTCCTGCAAGGTGATGCGGGATTCAAATGGTGTCAGCAGAGGTTCTGGATTTGTTGCG TTTAAATCTGCTGAAGATGCTTCCCGAGCTCTTGCCGAAATGAACAGCAAGATGGTTGGC AGCAAACCGCTCTACGTTGCGCTTGCACAGCGCAAGGAAGACAGGAAAGCAAGGCTGCAG GCACAATTTTCACAACTGAGGCCTGTCCCACTTGCTCCTTCAGTTGGTCCTCGCATGCCC ATGTTTCCACCTGGTGTTCCTGGAGTTGGACAGCAACTGTTCTATGGTCAGCCCCCTCCA GCGTTTATCAACACACAGCCTGGTTTCGGCTTCCAGCAGCCTCTTATGCCTGGGATGAGG CCAGGTGCAGGTCCAATGCCGAACTTTATCATGCCTATGGTTCAGCAAGGACAACAGCCG CAGCGTCCGGCTGGTAGGCGTGCTGGTGCTGGTGGAATGCAGCAACCCATGCCAATGGGT CAGCAACAGATGATGGCTAGGGGCGGCCGTGGCTATCGGTATCCTACAGGACGTGGCATG CCTGATCCTGCAATGCATGGTGTTGGGGGTGGTGTGATGCCATCTCCATATGAGATGGGA GGCATGCCCATGAGAGATGCTGCTGCGTCACAGCCTGTACCTATTGGAGCATTGGCTACT GCACTGGCCAACGCAGCCCCTGATCAGCAAAGAATGATGCTTGGTGAGAACTTGTATCCT CTTGTTGATCAGCTGGAGCATGAGCAGGCTGCGAAGGTGACTGGCATGCTGCTGGAGATG GACCAGACTGAGGTGCTGCACCTGCTCGAGTCTCCAGAGGCTCTCAAGGCCAAGGTTGCT GAAGCCATGGAGGTCCTTCGCACGGCCCAGCAGATCCAGACGAACGCGACGCCTGAACAG CAGCTTGCTTCTCTGTCGCTGAATGACGGCGTCGTTTCCTCCTAA

Peptide Sequence

PEP ID	Os09t0115400-04
PEP Infomation	pep chromosome:IRGSP-1.0:9:1213048:1215869:-1 gene:Os09g0115400 transcript:Os09t0115400-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Polyadenylate-binding protein description:Similar to Poly(A)-binding protein. (Os09t0115400-01);Hypothetical conserved gene. (Os09t0115400-03);Hypothetical conserved gene. (Os09t0115400-04)
Sequence	LDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVG SKPLYVALAQRKEDRKARLQAQFSQLRPVPLAPSVGPRMPMFPPGVPGVGQQLFYGQPPP AFINTQPGFGFQQPLMPGMRPGAGPMPNFIMPMVQQGQQPQRPAGRRAGAGGMQQPMPMG QQQMMARGGRGYRYPTGRGMPDPAMHGVGGGVMPSPYEMGGMPMRDAAASQPVPIGALAT ALANAAPDQQRMMLGENLYPLVDQLEHEQAAKVTGMLLEMDQTEVLHLLESPEALKAKVA EAMEVLRTAQQIQTNATPEQQLASLSLNDGVVSS

Transcript Sequence

Transcript ID	Os09t0115400-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:1213048:1215869:-1 gene:Os09g0115400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Polyadenylate-binding protein description:Similar to Poly(A)-binding protein. (Os09t0115400-01);Hypothetical conserved gene. (Os09t0115400-03);Hypothetical conserved gene. (Os09t0115400-04)
Sequence	TTGGATGATAGTGTTGATGATGATAAGTTGAGGGAGCTTTTTGCTGAGTATGGCACTATT ACTTCCTGCAAGGTGATGCGGGATTCAAATGGTGTCAGCAGAGGTTCTGGATTTGTTGCG TTTAAATCTGCTGAAGATGCTTCCCGAGCTCTTGCCGAAATGAACAGCAAGATGGTTGGC AGCAAACCGCTCTACGTTGCGCTTGCACAGCGCAAGGAAGACAGGAAAGCAAGGCTGCAG GCACAATTTTCACAACTGAGGCCTGTCCCACTTGCTCCTTCAGTTGGTCCTCGCATGCCC ATGTTTCCACCTGGTGTTCCTGGAGTTGGACAGCAACTGTTCTATGGTCAGCCCCCTCCA GCGTTTATCAACACACAGCCTGGTTTCGGCTTCCAGCAGCCTCTTATGCCTGGGATGAGG CCAGGTGCAGGTCCAATGCCGAACTTTATCATGCCTATGGTTCAGCAAGGACAACAGCCG CAGCGTCCGGCTGGTAGGCGTGCTGGTGCTGGTGGAATGCAGCAACCCATGCCAATGGGT CAGCAACAGATGATGGCTAGGGGCGGCCGTGGCTATCGGTATCCTACAGGACGTGGCATG CCTGATCCTGCAATGCATGGTGTTGGGGGTGGTGTGATGCCATCTCCATATGAGATGGGA GGCATGCCCATGAGAGATGCTGCTGCGTCACAGCCTGTACCTATTGGAGCATTGGCTACT GCACTGGCCAACGCAGCCCCTGATCAGCAAAGAATGATGCTTGGTGAGAACTTGTATCCT CTTGTTGATCAGCTGGAGCATGAGCAGGCTGCGAAGGTGACTGGCATGCTGCTGGAGATG GACCAGACTGAGGTGCTGCACCTGCTCGAGTCTCCAGAGGCTCTCAAGGCCAAGGTTGCT GAAGCCATGGAGGTCCTTCGCACGGCCCAGCAGATCCAGACGAACGCGACGCCTGAACAG CAGCTTGCTTCTCTGTCGCTGAATGACGGCGTCGTTTCCTCCTAAGCATAACGACGACAG CAATTTTTGATCCATATCTCAGTTATCTTATCTATCTAGAATTGAAAACGACTTGGTTAC TTGGTTTATTGGAGTTTTAGTTTTATTGGTAGTTGAACTAGGCATTTAGGCAATGCGCGT GGATTGGGTATTTTGTTTGCTCGGATCTTTTATTTTGCTTTATAAGTTATCATATGGATT GCTACTTT