Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0110300-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:920667:925984:-1 gene:Os09g0110300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cyclase-like 4 description:Putative cyclase family protein. (Os09t0110300-01);Putative cyclase family protein. (Os09t0110300-02)
Sequence

ATGGCACCCACGCCGTTGTTCCTCCTCCTGCTGCTCACCGGCGTTACGGCGGAGCCGGCG
CACCCGGGCTACGCGGAGGGCGATGGCAGCAGCTGCGACGTGGCGGCGGTAGCGGTGGCA
GAGAGGCGAGAGGAGTTCGACGGCGGGCGGATCGTGGACATCAGCCACTACTACCGGGAG
GAGATGCCGGAGTGGGAGTCGGCGGACGGCACCGGCGGCGGGTTCCTGCGGCTGGTGCGG
TCGATGCGCAACGGCTCCGACATCGCCAACTTCTCCGAGCTCCGCCTCACGGCGCACTCC
GGCACGCACGTCGACGCGCCGGGCCACGTCTTCGACCACTACTACCACGCTGGCTTCGAC
GTCGACACGCTCGACCTCGCCATCCTCAACGGACCAGCGTTGTTGGTCGATGTTCCTAGG
GATAGCAACATAACAGCTAACGTTATGGAATCCTTGCATATTCCCAAAGGAGTTCGGCGA
GTTCTCTTTCGAACTTTAAATACAGACAGGAAGCTTATGTGGAAGAAAGAATTTGATACA
AGCTATGTTGGTTTCATGAAAGATGGTGCTCAATGGTTGATTGATAACACAGACATTAGA
CTAGTTGGCGTTGACTACTTGTCAGTCGGAGCGTTTGATGAATGCATTCCTGCTCATTTA
GTTTTTCTTGAGAAAAGAGAAGTCATCCTTGTGGAAGCCTTACATTTAGAGCATGTTACC
CCAGGAATATATACCTTGCATTGCTTGCCACTAAGGTTACGTGGTTCTGAAGGTTCCCCG
GCAAGATGTATTCTCATCAAGTAA

Peptide Sequence

PEP ID

Os09t0110300-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:920667:925984:-1 gene:Os09g0110300 transcript:Os09t0110300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cyclase-like 4 description:Putative cyclase family protein. (Os09t0110300-01);Putative cyclase family protein. (Os09t0110300-02)
Sequence

MAPTPLFLLLLLTGVTAEPAHPGYAEGDGSSCDVAAVAVAERREEFDGGRIVDISHYYRE
EMPEWESADGTGGGFLRLVRSMRNGSDIANFSELRLTAHSGTHVDAPGHVFDHYYHAGFD
VDTLDLAILNGPALLVDVPRDSNITANVMESLHIPKGVRRVLFRTLNTDRKLMWKKEFDT
SYVGFMKDGAQWLIDNTDIRLVGVDYLSVGAFDECIPAHLVFLEKREVILVEALHLEHVT
PGIYTLHCLPLRLRGSEGSPARCILIK

Transcript Sequence

Transcript ID

Os09t0110300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:920667:925984:-1 gene:Os09g0110300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cyclase-like 4 description:Putative cyclase family protein. (Os09t0110300-01);Putative cyclase family protein. (Os09t0110300-02)
Sequence

AGAATTAATACACACACTCCATCTCCATGGCACCCACGCCGTTGTTCCTCCTCCTGCTGC
TCACCGGCGTTACGGCGGAGCCGGCGCACCCGGGCTACGCGGAGGGCGATGGCAGCAGCT
GCGACGTGGCGGCGGTAGCGGTGGCAGAGAGGCGAGAGGAGTTCGACGGCGGGCGGATCG
TGGACATCAGCCACTACTACCGGGAGGAGATGCCGGAGTGGGAGTCGGCGGACGGCACCG
GCGGCGGGTTCCTGCGGCTGGTGCGGTCGATGCGCAACGGCTCCGACATCGCCAACTTCT
CCGAGCTCCGCCTCACGGCGCACTCCGGCACGCACGTCGACGCGCCGGGCCACGTCTTCG
ACCACTACTACCACGCTGGCTTCGACGTCGACACGCTCGACCTCGCCATCCTCAACGGAC
CAGCGTTGTTGGTCGATGTTCCTAGGGATAGCAACATAACAGCTAACGTTATGGAATCCT
TGCATATTCCCAAAGGAGTTCGGCGAGTTCTCTTTCGAACTTTAAATACAGACAGGAAGC
TTATGTGGAAGAAAGAATTTGATACAAGCTATGTTGGTTTCATGAAAGATGGTGCTCAAT
GGTTGATTGATAACACAGACATTAGACTAGTTGGCGTTGACTACTTGTCAGTCGGAGCGT
TTGATGAATGCATTCCTGCTCATTTAGTTTTTCTTGAGAAAAGAGAAGTCATCCTTGTGG
AAGCCTTACATTTAGAGCATGTTACCCCAGGAATATATACCTTGCATTGCTTGCCACTAA
GGTTACGTGGTTCTGAAGGTTCCCCGGCAAGATGTATTCTCATCAAGTAACATATGCTTA
TAAGGTTTACATCGACATCTTATATGTGTTGAAATGTTGAATGGTGTTGATGGTTGTCAA
GTCAGATGCATCCACCTAGGACATATGTATATGACAAACTATGCATAGTATTTGACACAT
ATATATGATTGTAAAATAAGATCATGTTGCCTTCTAACAGGTTAATGTCTGTGCATCTAT
CAGCTATAAACTTATATATATTACTATTGTAATTG