Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0110200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:915379:918051:-1 gene:Os09g0110200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0110200-01)
Sequence	ATGAGATGTGCGGCGGCGGCACGGTCCTTCCTCCCTCTCCCCTCCACCACCCGCATCCAC ACCACCGCCACCGCATCGTCTCCATCTCTCGCCGCCGAGCTCGACGCCGCCGACGCCCTC CACACGCTCCTCTCCACGCTCCCGCCCTCGCTCCCCGCGCTGCTCCCCTGCCTCTCCCTC CTCTCGCCAACCCTCACCCCGCACGCCGTCTCGGATGCCCTCCTCTGCGCCGCCATCCCC GCCGCCTCCCGCCTCCGCCTCTTCCTCTTCTCCGCCCTCTCGCCGCGCCTCCGCTCCCGC CCGCTCCACGCCCACGCCGTATCCCTCCTCCTCCGACTCTCTTCCCATGCCGACGAGGCC ATGTTCGACGCCCTCGCCGACGCCCGCGCCGCCGGCCTCCCGGCCTCCTCTTCCGCTTTC GCGGCACTCGTCGCCGCGCACTCCTCCGCCGGCCGCCACGCCGATGCCGTCCAGGCGTTC TCCCGGATGGATGAGTTCCAAAGCCGCCCCACCGCCTTCGTCTACAACACCATCCTCAAG GCCCTCGTCGACAGCGGGGTCATCCTCCTCGCCCTGGCTCTCTACAACCGGATGGTCGCC GCCGGCTGCGCGCCCAACAGGGCCACGTACAATGTACTCATGGACGGGCTGTGCAAGCAG GGTATGGCGGGGGATGCGCTCAAGATGTTCGACGAAATGCTTGACAGGGGGATCATGCCC AATGTGAAGATCTACACCGTCCTGCTCTCGTCCCTGTGCAATGCAGGGAAGATTGACGAA GCCGTGCAGCTTCTGGGGTCGATGAAGGACAAGGGGTGCCTGCCCGACGAGGTCACTTAC AACGCCTTCTTGAGTGGTCTGTGCAAAGTTGGTAGGGTCAATGAGGCATTTCAGCGCCTG GTGATGCTGCAAGATGGTGGATTTGCACTGGGGTTAAAAGGGTATAGCTGTTTGATTGAT GGTCTGTTCCAGGCCAGGCGTTTTGATGAGGGCTTTGGCTATTACAAGACAATGTTAGAG CGCAACATCTCACCAGACGTTGTTCTGTATACGATAATGATCCGTGGTTGTGCAGAGGCC GGCAGAATTGAGGATGCCTTATCATTCCTTGATGTAATGAAAAAGAAAGGTTTCGTGCCT GACACCTTTTGTTATAACACAGTGCTCAAGGTTCTATGTGATCACGGTGATCTAGAGAGA GCTCACACGTTGAGGTCAGAGATGTTGCAGAATAACTTGGTCCTAGACTCCACTACACAA ACTATCATGATATGTGGACTGTGCAAGCGAGGACTTGTTGATGAGGCAATGCAGATTTTT GATGAGATGGGAGAGCATGGTTGTGATCCAACAGTTATGACATACAACGCACTCATTGAC GGATTCTACAGGGAGGGCAGACTGGAGGAAGCTCGTATGCTTTTCCATAAGATGGAGATG GGAAATAATCCTTCCTTGTTCCTTCGGTTGACCCTCGGTGCAAACCAGGTGTGTGACAGT GAGAGCCTCCGTAAACTGGTTCATGATATGTGCCAATCTGGCCAGGTGCTAAAAGCATAC AAACTTCTTCGAAGTATAATAGACAGTGGAGTCGTTCCTGATGTTGTCACGTATAACACA TTGATAAATGGACTCTGTAAAGCGAGGAATCTTGATGGAGCAGTAAGGCTCTTCAAAGAG CTTCAACTCAAAGGAATTTCTCCTGATGAAATCACTTACGGGACTCTTATTGATGGGCTG TTGAGGGCGCACAGAGAAAATGATGCCATGATGTTGTTTCAGAACATTTTGCAGAGCGGT AGCTCCCCGAGTTTGTCAATCTACAATTCTATGATGAGATCGCTATGTAGGATGAAGAAA TTGTCGCAAGCAATCAACCTCTGGTTGGATTACCTGCCAAAAAAGTACAATTTCCCAGTG GAGAGTGAAGTACTTGCTAATGCCCACAAAGAAATTGAAGATGGTTCCCTGGATGATGGA GTAAGGGAGTTAATCAAGATAGATCAAGAATATGGTTATATTAGTTCAAACCCTTATACC ATTTGGCTAATTGGGCTTTGTCAGGTAAGGAGAACTGATGATGCACTTAGGATTTTTCAT ACTCTTCAGGAGTTTGGCATTGACATCACACCAGCATGCTGTGCCCTTCTTATCAATTAC TTATGTTGGGATAGAAATCTAAATGCGGCAGTTGATATTATGCTGTATGCATTGAGTAAA TCCATCATTTTGTCACAACCTGTAGGCAACCGCTTACTTAGGTGGCTTTGTATCTGTTAC AGAAGGCAGGATGCACAAGCTCTTGCATGGAGAATGCATCTTGTAGGATATGATATGGAT GTATATCTCCGTGAGCCTACAAAAAGTTTGTTATACAGTCAATAG

Peptide Sequence

PEP ID	Os09t0110200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:915379:918051:-1 gene:Os09g0110200 transcript:Os09t0110200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0110200-01)
Sequence	MRCAAAARSFLPLPSTTRIHTTATASSPSLAAELDAADALHTLLSTLPPSLPALLPCLSL LSPTLTPHAVSDALLCAAIPAASRLRLFLFSALSPRLRSRPLHAHAVSLLLRLSSHADEA MFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILK ALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG SSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDG VRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINY LCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMD VYLREPTKSLLYSQ

Transcript Sequence

Transcript ID	Os09t0110200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:915379:918051:-1 gene:Os09g0110200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0110200-01)
Sequence	CTCTCCTCCTTTCCTCTCCCCGCCGCCGCTACCGCCACCGCCGCCGCCGCCGCCGCGCCG AGCCTTACTCCCATTCCTTCCCTCGATGACCGCATGAGATGTGCGGCGGCGGCACGGTCC TTCCTCCCTCTCCCCTCCACCACCCGCATCCACACCACCGCCACCGCATCGTCTCCATCT CTCGCCGCCGAGCTCGACGCCGCCGACGCCCTCCACACGCTCCTCTCCACGCTCCCGCCC TCGCTCCCCGCGCTGCTCCCCTGCCTCTCCCTCCTCTCGCCAACCCTCACCCCGCACGCC GTCTCGGATGCCCTCCTCTGCGCCGCCATCCCCGCCGCCTCCCGCCTCCGCCTCTTCCTC TTCTCCGCCCTCTCGCCGCGCCTCCGCTCCCGCCCGCTCCACGCCCACGCCGTATCCCTC CTCCTCCGACTCTCTTCCCATGCCGACGAGGCCATGTTCGACGCCCTCGCCGACGCCCGC GCCGCCGGCCTCCCGGCCTCCTCTTCCGCTTTCGCGGCACTCGTCGCCGCGCACTCCTCC GCCGGCCGCCACGCCGATGCCGTCCAGGCGTTCTCCCGGATGGATGAGTTCCAAAGCCGC CCCACCGCCTTCGTCTACAACACCATCCTCAAGGCCCTCGTCGACAGCGGGGTCATCCTC CTCGCCCTGGCTCTCTACAACCGGATGGTCGCCGCCGGCTGCGCGCCCAACAGGGCCACG TACAATGTACTCATGGACGGGCTGTGCAAGCAGGGTATGGCGGGGGATGCGCTCAAGATG TTCGACGAAATGCTTGACAGGGGGATCATGCCCAATGTGAAGATCTACACCGTCCTGCTC TCGTCCCTGTGCAATGCAGGGAAGATTGACGAAGCCGTGCAGCTTCTGGGGTCGATGAAG GACAAGGGGTGCCTGCCCGACGAGGTCACTTACAACGCCTTCTTGAGTGGTCTGTGCAAA GTTGGTAGGGTCAATGAGGCATTTCAGCGCCTGGTGATGCTGCAAGATGGTGGATTTGCA CTGGGGTTAAAAGGGTATAGCTGTTTGATTGATGGTCTGTTCCAGGCCAGGCGTTTTGAT GAGGGCTTTGGCTATTACAAGACAATGTTAGAGCGCAACATCTCACCAGACGTTGTTCTG TATACGATAATGATCCGTGGTTGTGCAGAGGCCGGCAGAATTGAGGATGCCTTATCATTC CTTGATGTAATGAAAAAGAAAGGTTTCGTGCCTGACACCTTTTGTTATAACACAGTGCTC AAGGTTCTATGTGATCACGGTGATCTAGAGAGAGCTCACACGTTGAGGTCAGAGATGTTG CAGAATAACTTGGTCCTAGACTCCACTACACAAACTATCATGATATGTGGACTGTGCAAG CGAGGACTTGTTGATGAGGCAATGCAGATTTTTGATGAGATGGGAGAGCATGGTTGTGAT CCAACAGTTATGACATACAACGCACTCATTGACGGATTCTACAGGGAGGGCAGACTGGAG GAAGCTCGTATGCTTTTCCATAAGATGGAGATGGGAAATAATCCTTCCTTGTTCCTTCGG TTGACCCTCGGTGCAAACCAGGTGTGTGACAGTGAGAGCCTCCGTAAACTGGTTCATGAT ATGTGCCAATCTGGCCAGGTGCTAAAAGCATACAAACTTCTTCGAAGTATAATAGACAGT GGAGTCGTTCCTGATGTTGTCACGTATAACACATTGATAAATGGACTCTGTAAAGCGAGG AATCTTGATGGAGCAGTAAGGCTCTTCAAAGAGCTTCAACTCAAAGGAATTTCTCCTGAT GAAATCACTTACGGGACTCTTATTGATGGGCTGTTGAGGGCGCACAGAGAAAATGATGCC ATGATGTTGTTTCAGAACATTTTGCAGAGCGGTAGCTCCCCGAGTTTGTCAATCTACAAT TCTATGATGAGATCGCTATGTAGGATGAAGAAATTGTCGCAAGCAATCAACCTCTGGTTG GATTACCTGCCAAAAAAGTACAATTTCCCAGTGGAGAGTGAAGTACTTGCTAATGCCCAC AAAGAAATTGAAGATGGTTCCCTGGATGATGGAGTAAGGGAGTTAATCAAGATAGATCAA GAATATGGTTATATTAGTTCAAACCCTTATACCATTTGGCTAATTGGGCTTTGTCAGGTA AGGAGAACTGATGATGCACTTAGGATTTTTCATACTCTTCAGGAGTTTGGCATTGACATC ACACCAGCATGCTGTGCCCTTCTTATCAATTACTTATGTTGGGATAGAAATCTAAATGCG GCAGTTGATATTATGCTGTATGCATTGAGTAAATCCATCATTTTGTCACAACCTGTAGGC AACCGCTTACTTAGGTGGCTTTGTATCTGTTACAGAAGGCAGGATGCACAAGCTCTTGCA TGGAGAATGCATCTTGTAGGATATGATATGGATGTATATCTCCGTGAGCCTACAAAAAGT TTGTTATACAGTCAATAGAAAAGTCTGTAGTGTTTGTAGGACTACAGAGCTGCCCTGAAG AGGGATGCTGATGTTTTTGTTCTGTACCAATTTTCTAAGGAAGAAAGCAAAATAGGGTGT TATTTACTGATTTCTTAGCTCTTGCAAGGGATTTTGTAACCATCAGTTGAGTTGTAACTT CAATAATGAGTCAAATTTTTTGATGTTCCACAG