Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0110100-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:906903:909618:1 gene:Os09g0110100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os09t0110100-01)
Sequence	ATGCCCTCAAATCTCCATGCATGCCATTGGCATCTCCATTCCATGTCGTCGTCCATGGCG ATCTCGTTGCTGCTGCTCCTCCTCCTCCTTGGCGCCGGCCACATGACCCAGCCGACGGCG GCGGCGCTCAACCAGGACGGCGTGCTGCTCCTCTCCTTCAAGTTCTCGCTCTTGGCTGAC CCGCTCGCCTCCCTCGCCGGCTGGGGCTACTCCGACGACACGCCCTGCGCCTGGAACGGC GTCGTCTGCATGGCCTTCCCGTCGTCGTCGGCGTCGGAGGCGGCGAGGGTGGTGAGCGTC GTCCTGCCCAACGCGCAGCTGGTCGGCCCCATTGCCAGGGAGCTCGGCCTCATCGAGCAC CTCCGCCACCTCGACCTCTCCGGCAACGCGCTCAACGGCACCGTCCCCGTCGAGCTGCTG CGCGCGCCGGAGCTCCGCGTGCTCTCGCTCGCCGGCAACGGCATCAACGGCGCCCTGCCC GACCAGGTCGGCCAGCTCCGCAGCCTCCGCGCGCTCAACCTCGCCGGGAACGCCCTCTCC GGCCCCATCCCGGCGAACCTCACCCTGCTCCCCAACCTCACCGCCGTCTCCTTGGCCAAC AACTTCTTCTCCGGCGCGCTCCCCGTCGGGGGCTTCCCGGCGCTGCAGGTGCTCGACGTC AGCTCCAACCTCCTCAACGGCACGCTCCCGCCGGACTTCGGCGGCGCCGCGCTGCGCTAC GTCAACCTCTCCTCCAACCGCCTCGCCGGCGCCATCCCGCCGGAGATGGCGTCGCGCCTG CCGCCCAACGTCACCATCGACCTCTCCTACAACAACCTCACCGGCGCCATTCCCACGCTG GCGCCCTTCACCGTGCAGAGGCCCACGGCGTTCGCGGGCAACGCCGAGCTGTGCGGGAGG CCGCTCGACAGCCTCTGCGCCTCCGCCGCGGATCCACCCATCAATGGCACGGCACGCTCG CCGCCGGCCATCGCGGCGATACCCAAGAACCCCACCGAGGCGCTGCCCGGCGATGACACC GGAGCGCCGGCGTCAGGATCAGGCCAGCAGGGCAGGATGAGGATGGCCACCATCATCGCC ATCGCCGCCGGCGACGTGGCCGGCATCGCCGTCCTGGTGGTGGTGTTCATGTACGTGTAC CAGGTGAGGAAGAAGAGGCAGCGGGAGGAGGCGGCGAAGCAGAGGATGGGCGTCGTGTTC AAGAAGCCGGAGCCCGACGAGTCGCCGGACGGCATCGGCCGGAGCCTGTCGTGCTGCCTG CGGAAGAAGGCCGGAGACGAGAGCGACAGCACGGAGGAGGTGACTGACACGTCGGCGTCC AAGGAGGGCGTCGTCGCCGCCAAGGCCAAGACGGACGACAAGAAGGGCAAGGACGGCGGC GGCGGCGCGGTGCTGGTGACGGTGGACGGAGAGGTGGAGCTGGAGATGGAGACGCTGCTG AAGGCGTCGGCGTACATCCTGGGCGCGGCGGGCAGCAGCATCGTGTACAAGGCGGTGCTG GCCGACGGCGCCGTGCTGGCGGTGCGCAGGATCGGCAGCGACGACGCCGGCGTGAGGCGG TTCAGCGAGTTCGACGCCCACATGCGCGCCATCGCCAGGCTCCGCCACGCCAACATCCTC CGCCTCCGCGGCTTCTACTGGGGACCCGACGAGATGCTCCTCATCCACGACTTCGCCGCC AATGGCAGCCTCGCCAACATCTCCGTCAAGAGGAAGACGGGGTCGTCGCCGATCAGCCTG AGTTGGAGCTCGCGGCTGCGCATCGCGCGCGGCGTGGCGAGAGGGCTGGCCTTCCTCCAC GACAAGAAGTTCGTGCACGGCAACGTTCGCCCCAGCAACATCCTGCTCGACGCCGACATG GAGCCGCTATTGGCGGACCTCGGGATCCACCGGCTCATCCGCGGCGGGGACACGCTCAAG CCGGCGGCTGCGGCGGGGGCGGGGCGGTTCGGGAGCAAGCGGTCGGCGAAGAGCTTGCCG GACCTGTCGCCGCCGCCGGGCGCGAGCCCGCTGGCGGGGCCGTCCGGGTCCGGCGACACA GCGGTGGCGCAGTACCAGGCGCCGGAGGGCGTGAAGAACCCCAAGGCGAACGCCAAGTGG GACGTCTACTCCTTGGGCATGGTGCTCCTCGAGCTGGTCGCCGGGCGCGCGCTGACGAGC CTGGAGCTCTGCCAGTGGAGCTCCGCGGAGGAGAGCGGGCAGCAGGTGTTCCGGCTGGCC GACGCGGCGCTGCGCGGGGAGATGGCCGGGAGGGAGGAGGCGCTGGCGAGCTGCCTCCGG CTGGGGTTCGCGTGCTGCGCCATGGCGCCGCACAAGAGGCCGTCCATGAAGGAGGTGGTG GCGGCGATGGACAGGATACCGTCGCCGTCGTCGTCGGCTCAGTGA

Peptide Sequence

PEP ID	Os09t0110100-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:906903:909618:1 gene:Os09g0110100 transcript:Os09t0110100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os09t0110100-01)
Sequence	MPSNLHACHWHLHSMSSSMAISLLLLLLLLGAGHMTQPTAAALNQDGVLLLSFKFSLLAD PLASLAGWGYSDDTPCAWNGVVCMAFPSSSASEAARVVSVVLPNAQLVGPIARELGLIEH LRHLDLSGNALNGTVPVELLRAPELRVLSLAGNGINGALPDQVGQLRSLRALNLAGNALS GPIPANLTLLPNLTAVSLANNFFSGALPVGGFPALQVLDVSSNLLNGTLPPDFGGAALRY VNLSSNRLAGAIPPEMASRLPPNVTIDLSYNNLTGAIPTLAPFTVQRPTAFAGNAELCGR PLDSLCASAADPPINGTARSPPAIAAIPKNPTEALPGDDTGAPASGSGQQGRMRMATIIA IAAGDVAGIAVLVVVFMYVYQVRKKRQREEAAKQRMGVVFKKPEPDESPDGIGRSLSCCL RKKAGDESDSTEEVTDTSASKEGVVAAKAKTDDKKGKDGGGGAVLVTVDGEVELEMETLL KASAYILGAAGSSIVYKAVLADGAVLAVRRIGSDDAGVRRFSEFDAHMRAIARLRHANIL RLRGFYWGPDEMLLIHDFAANGSLANISVKRKTGSSPISLSWSSRLRIARGVARGLAFLH DKKFVHGNVRPSNILLDADMEPLLADLGIHRLIRGGDTLKPAAAAGAGRFGSKRSAKSLP DLSPPPGASPLAGPSGSGDTAVAQYQAPEGVKNPKANAKWDVYSLGMVLLELVAGRALTS LELCQWSSAEESGQQVFRLADAALRGEMAGREEALASCLRLGFACCAMAPHKRPSMKEVV AAMDRIPSPSSSAQ

Transcript Sequence

Transcript ID	Os09t0110100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:906903:909618:1 gene:Os09g0110100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os09t0110100-01)
Sequence	ATCCTACTATCCCTAACCAATCCAAAACCCTCATTCCCTTCTTATGCCCTCAAATCTCCA TGCATGCCATTGGCATCTCCATTCCATGTCGTCGTCCATGGCGATCTCGTTGCTGCTGCT CCTCCTCCTCCTTGGCGCCGGCCACATGACCCAGCCGACGGCGGCGGCGCTCAACCAGGA CGGCGTGCTGCTCCTCTCCTTCAAGTTCTCGCTCTTGGCTGACCCGCTCGCCTCCCTCGC CGGCTGGGGCTACTCCGACGACACGCCCTGCGCCTGGAACGGCGTCGTCTGCATGGCCTT CCCGTCGTCGTCGGCGTCGGAGGCGGCGAGGGTGGTGAGCGTCGTCCTGCCCAACGCGCA GCTGGTCGGCCCCATTGCCAGGGAGCTCGGCCTCATCGAGCACCTCCGCCACCTCGACCT CTCCGGCAACGCGCTCAACGGCACCGTCCCCGTCGAGCTGCTGCGCGCGCCGGAGCTCCG CGTGCTCTCGCTCGCCGGCAACGGCATCAACGGCGCCCTGCCCGACCAGGTCGGCCAGCT CCGCAGCCTCCGCGCGCTCAACCTCGCCGGGAACGCCCTCTCCGGCCCCATCCCGGCGAA CCTCACCCTGCTCCCCAACCTCACCGCCGTCTCCTTGGCCAACAACTTCTTCTCCGGCGC GCTCCCCGTCGGGGGCTTCCCGGCGCTGCAGGTGCTCGACGTCAGCTCCAACCTCCTCAA CGGCACGCTCCCGCCGGACTTCGGCGGCGCCGCGCTGCGCTACGTCAACCTCTCCTCCAA CCGCCTCGCCGGCGCCATCCCGCCGGAGATGGCGTCGCGCCTGCCGCCCAACGTCACCAT CGACCTCTCCTACAACAACCTCACCGGCGCCATTCCCACGCTGGCGCCCTTCACCGTGCA GAGGCCCACGGCGTTCGCGGGCAACGCCGAGCTGTGCGGGAGGCCGCTCGACAGCCTCTG CGCCTCCGCCGCGGATCCACCCATCAATGGCACGGCACGCTCGCCGCCGGCCATCGCGGC GATACCCAAGAACCCCACCGAGGCGCTGCCCGGCGATGACACCGGAGCGCCGGCGTCAGG ATCAGGCCAGCAGGGCAGGATGAGGATGGCCACCATCATCGCCATCGCCGCCGGCGACGT GGCCGGCATCGCCGTCCTGGTGGTGGTGTTCATGTACGTGTACCAGGTGAGGAAGAAGAG GCAGCGGGAGGAGGCGGCGAAGCAGAGGATGGGCGTCGTGTTCAAGAAGCCGGAGCCCGA CGAGTCGCCGGACGGCATCGGCCGGAGCCTGTCGTGCTGCCTGCGGAAGAAGGCCGGAGA CGAGAGCGACAGCACGGAGGAGGTGACTGACACGTCGGCGTCCAAGGAGGGCGTCGTCGC CGCCAAGGCCAAGACGGACGACAAGAAGGGCAAGGACGGCGGCGGCGGCGCGGTGCTGGT GACGGTGGACGGAGAGGTGGAGCTGGAGATGGAGACGCTGCTGAAGGCGTCGGCGTACAT CCTGGGCGCGGCGGGCAGCAGCATCGTGTACAAGGCGGTGCTGGCCGACGGCGCCGTGCT GGCGGTGCGCAGGATCGGCAGCGACGACGCCGGCGTGAGGCGGTTCAGCGAGTTCGACGC CCACATGCGCGCCATCGCCAGGCTCCGCCACGCCAACATCCTCCGCCTCCGCGGCTTCTA CTGGGGACCCGACGAGATGCTCCTCATCCACGACTTCGCCGCCAATGGCAGCCTCGCCAA CATCTCCGTCAAGAGGAAGACGGGGTCGTCGCCGATCAGCCTGAGTTGGAGCTCGCGGCT GCGCATCGCGCGCGGCGTGGCGAGAGGGCTGGCCTTCCTCCACGACAAGAAGTTCGTGCA CGGCAACGTTCGCCCCAGCAACATCCTGCTCGACGCCGACATGGAGCCGCTATTGGCGGA CCTCGGGATCCACCGGCTCATCCGCGGCGGGGACACGCTCAAGCCGGCGGCTGCGGCGGG GGCGGGGCGGTTCGGGAGCAAGCGGTCGGCGAAGAGCTTGCCGGACCTGTCGCCGCCGCC GGGCGCGAGCCCGCTGGCGGGGCCGTCCGGGTCCGGCGACACAGCGGTGGCGCAGTACCA GGCGCCGGAGGGCGTGAAGAACCCCAAGGCGAACGCCAAGTGGGACGTCTACTCCTTGGG CATGGTGCTCCTCGAGCTGGTCGCCGGGCGCGCGCTGACGAGCCTGGAGCTCTGCCAGTG GAGCTCCGCGGAGGAGAGCGGGCAGCAGGTGTTCCGGCTGGCCGACGCGGCGCTGCGCGG GGAGATGGCCGGGAGGGAGGAGGCGCTGGCGAGCTGCCTCCGGCTGGGGTTCGCGTGCTG CGCCATGGCGCCGCACAAGAGGCCGTCCATGAAGGAGGTGGTGGCGGCGATGGACAGGAT ACCGTCGCCGTCGTCGTCGGCTCAGTGACGCACGCACGCCGTTCATTCTTCATCTCTTTT TTCTCCTCCATGTCCCAAACCTGTAAACTTGTTGAGTTCTTGATGCTTTGCACCATGCAT GTAGTAGTTTGCTCGCTGTTGGTTTTGCCATGGTTTTCCAGCCCAATTTCTGAAAGGAAT TGGTGTGTTTTGTTCATACCATCATATTATCTTTGCCTGTTAATATGAGTTGATTATTCA TTTGC