Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0108400-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:799487:806530:1 gene:Os09g0108400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0108400-01);Conserved hypothetical protein. (Os09t0108400-02)
Sequence

ATGTCAGGGATCCTCGCGTGGGCGGCCGACGTGGTCGGCGGGGCCGGCGCCGCCAACGAC
GACGAAGCTGATGACGCTCGGGCGGTGGCGTCCGCGGCCATGACCCCGGAGCAGCGCCTC
CGTGCCGCTGACCTGGATGCCAAGGCAGCATCGCTGCGGCGCTCGATCCACGACCTCCGC
CTCCGGGTGCCCCCGCCTCATGTGGCGCAGCGCCTGCCGCACCTCCATGCTCATTCCCTC
GCGTCCTCAGCCGCCCTCGCGCTCCAGCTCAATGCCCACTCCTCCACCAAGGAACAGGCA
CTGCAGAGAGAGATAACACTTCAAGAAGAAAATGCAGCTTATGAGAAAGCTATATCAAAT
TGTCGGCAGAAAATTCAGGAAAAGCAGATGGAGGTTACTCTGCTTCGGAGTAATTTGAAG
GAAATGGAAATTTCAGAGCAGGATTTGAAGGCACAGCTGGACAATGCTCAGAATGAGCAA
TATGCTTCTCAAAATAAAGCATCAGCTGCTGCTTCTGACAATACTGGAAATGCTTTGATG
GAAGCTGAATCATTGATTAATCTCAAGTCTAATGACTTGAAAGAGAAGAATGAAGAGCTG
AAATTGTTGGAAAGTAGTGTGCGAGTGCTGGAGATGGAGTGGTCCGTAGTTGAAGGGGAA
TCCTTGAAGAATCCGACTCCTGCCCAGAGGGAAAAGGTCCTGGAGAAACAATTACATAGC
CTCATTGAGCAGCTGACAGCTAAGCAAGCTCAAGCTGAAGGCCTAATCGTGGATGTTCAT
GCCAAAGAAAAGGAATTGGAAAGGTTGAATAATTTACATAAAAATCTTCAAAGTCGTAAC
AATGATGGTAGTGTAGCACGAAATCCATTCAGGGCTGTGCATGAAGATTCTGATGCCAAA
GCTGTTCGGCGACCCTATCAATTTGGTCTTAGAACCGAAGGGCTGAAAAGGTTGATGATT
CTTAGGTCTGCTTTTGTTCTCTATATTTTGGTACTTCATATTGTTGTTTTCATAAAGCTC
TCGGTTTCAAAGCAGTAA

Peptide Sequence

PEP ID

Os09t0108400-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:799487:806530:1 gene:Os09g0108400 transcript:Os09t0108400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0108400-01);Conserved hypothetical protein. (Os09t0108400-02)
Sequence

MSGILAWAADVVGGAGAANDDEADDARAVASAAMTPEQRLRAADLDAKAASLRRSIHDLR
LRVPPPHVAQRLPHLHAHSLASSAALALQLNAHSSTKEQALQREITLQEENAAYEKAISN
CRQKIQEKQMEVTLLRSNLKEMEISEQDLKAQLDNAQNEQYASQNKASAAASDNTGNALM
EAESLINLKSNDLKEKNEELKLLESSVRVLEMEWSVVEGESLKNPTPAQREKVLEKQLHS
LIEQLTAKQAQAEGLIVDVHAKEKELERLNNLHKNLQSRNNDGSVARNPFRAVHEDSDAK
AVRRPYQFGLRTEGLKRLMILRSAFVLYILVLHIVVFIKLSVSKQ

Transcript Sequence

Transcript ID

Os09t0108400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:799487:806530:1 gene:Os09g0108400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0108400-01);Conserved hypothetical protein. (Os09t0108400-02)
Sequence

AGCCGCAGATCTCCATCCCGCCAGCAGCGGCGCCGGCATCCTGCTTCCACCGCGTCCTCG
CAGTAGTAGATAGATCTATTTGCCTGGCTCTCAGGGAAGAGGGTAGGAGTGTGGCATGTC
AGGGATCCTCGCGTGGGCGGCCGACGTGGTCGGCGGGGCCGGCGCCGCCAACGACGACGA
AGCTGATGACGCTCGGGCGGTGGCGTCCGCGGCCATGACCCCGGAGCAGCGCCTCCGTGC
CGCTGACCTGGATGCCAAGGCAGCATCGCTGCGGCGCTCGATCCACGACCTCCGCCTCCG
GGTGCCCCCGCCTCATGTGGCGCAGCGCCTGCCGCACCTCCATGCTCATTCCCTCGCGTC
CTCAGCCGCCCTCGCGCTCCAGCTCAATGCCCACTCCTCCACCAAGGAACAGGCACTGCA
GAGAGAGATAACACTTCAAGAAGAAAATGCAGCTTATGAGAAAGCTATATCAAATTGTCG
GCAGAAAATTCAGGAAAAGCAGATGGAGGTTACTCTGCTTCGGAGTAATTTGAAGGAAAT
GGAAATTTCAGAGCAGGATTTGAAGGCACAGCTGGACAATGCTCAGAATGAGCAATATGC
TTCTCAAAATAAAGCATCAGCTGCTGCTTCTGACAATACTGGAAATGCTTTGATGGAAGC
TGAATCATTGATTAATCTCAAGTCTAATGACTTGAAAGAGAAGAATGAAGAGCTGAAATT
GTTGGAAAGTAGTGTGCGAGTGCTGGAGATGGAGTGGTCCGTAGTTGAAGGGGAATCCTT
GAAGAATCCGACTCCTGCCCAGAGGGAAAAGGTCCTGGAGAAACAATTACATAGCCTCAT
TGAGCAGCTGACAGCTAAGCAAGCTCAAGCTGAAGGCCTAATCGTGGATGTTCATGCCAA
AGAAAAGGAATTGGAAAGGTTGAATAATTTACATAAAAATCTTCAAAGTCGTAACAATGA
TGGTAGTGTAGCACGAAATCCATTCAGGGCTGTGCATGAAGATTCTGATGCCAAAGCTGT
TCGGCGACCCTATCAATTTGGTCTTAGAACCGAAGGGCTGAAAAGGTTGATGATTCTTAG
GTCTGCTTTTGTTCTCTATATTTTGGTACTTCATATTGTTGTTTTCATAAAGCTCTCGGT
TTCAAAGCAGTAAGAAACTTTTGTTCCCATATAAAGAGGAACTATGTTTCTGATATTAAC
GTGTGACTATTTTCCTATGTATTTAGTTCTAAAAATGTTTATCCCCATACAAAGGATCTT
TGTTTCTACTATCAAACATGCAAGTACTTGCAGGATGTATAAATCAAGAAGCGTCGTAGC
CTCTTCCAGCTTC