Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0104300-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:490959:493966:1 gene:Os09g0104300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1168 family protein. (Os09t0104300-01)
Sequence

ATGTCAGATCCTGGAAGGGATAGCAACATGCAGCAGCTCATCCCGATAGCACCTCCACCA
AAGGCTTCTTCTGGTACCACTGGCAAGGAGCTCGTGGTCGTGGATGGTACGGGAAAGGCT
TCAGGAGGAGTCAAGCTACGGGAAGACGAGGAGGACCTGGAGGTGAAGCTCAGGCGCATC
ATGGAGAACGTCCCTGTCCGTGTCAGCAACACCTCCGGATCCTCTGCTGGTTCTGGCTCT
GGTGATTTCCACCAGTATCGGCAAATGAGGAGGAGAGAACAGGACCGTCTTGCAAGGATG
GATGCTGATTACCAGAAGAGGAAACAGATGGCTGAGTTTGAATTGAGGAGGGAGGAAAGG
CTAAAAGAAGCAGAGGAGCGGACAGCAAAGAAGCGCCTGAAACGCCAAAAGAAGAAGCAG
CGGAAGAAAGAGAAGAAACGATCTAAAACTAATAATGGTGGCGAGCAACCTAACGGAGGG
GAGTCGTCTGGTGGTGATGAGGATTCAGACGATGAAGATAAGCCATAG

Peptide Sequence

PEP ID

Os09t0104300-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:490959:493966:1 gene:Os09g0104300 transcript:Os09t0104300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1168 family protein. (Os09t0104300-01)
Sequence

MSDPGRDSNMQQLIPIAPPPKASSGTTGKELVVVDGTGKASGGVKLREDEEDLEVKLRRI
MENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLARMDADYQKRKQMAEFELRREER
LKEAEERTAKKRLKRQKKKQRKKEKKRSKTNNGGEQPNGGESSGGDEDSDDEDKP

Transcript Sequence

Transcript ID

Os09t0104300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:490959:493966:1 gene:Os09g0104300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1168 family protein. (Os09t0104300-01)
Sequence

AAGTTCGAGGAGAGAAAACCAAACCCTAGCTAGGCTAAGGCGGAGTGGAGAACCCCCGCC
GTTGCCGGCGGCGGAGGCAGCGGCGGCGGCGCGCGGAGAACACTCCGTCGCGGTCGATTC
CGTATCAACAATGTCAGATCCTGGAAGGGATAGCAACATGCAGCAGCTCATCCCGATAGC
ACCTCCACCAAAGGCTTCTTCTGGTACCACTGGCAAGGAGCTCGTGGTCGTGGATGGTAC
GGGAAAGGCTTCAGGAGGAGTCAAGCTACGGGAAGACGAGGAGGACCTGGAGGTGAAGCT
CAGGCGCATCATGGAGAACGTCCCTGTCCGTGTCAGCAACACCTCCGGATCCTCTGCTGG
TTCTGGCTCTGGTGATTTCCACCAGTATCGGCAAATGAGGAGGAGAGAACAGGACCGTCT
TGCAAGGATGGATGCTGATTACCAGAAGAGGAAACAGATGGCTGAGTTTGAATTGAGGAG
GGAGGAAAGGCTAAAAGAAGCAGAGGAGCGGACAGCAAAGAAGCGCCTGAAACGCCAAAA
GAAGAAGCAGCGGAAGAAAGAGAAGAAACGATCTAAAACTAATAATGGTGGCGAGCAACC
TAACGGAGGGGAGTCGTCTGGTGGTGATGAGGATTCAGACGATGAAGATAAGCCATAGGC
AAGTGGCACACATCAATCGGATTTGAAGTTGCTATTAGACTACTGTTGAACCATTTCTTG
GAGATTACTTCTGAAGTAGAGCTTTGAGCATGAACTAATATTGGCAGGCTGCAGGCCCCC
TTGTAGTTTTTTCTTGGAAACACTCTTAAGATGAGATGTGGCTTGTTTTCCTTGCTCTGA
TAAAGTGACTATGGAGTATGGATGGATAGATGAATCATTTTCTGGTTACCTTGTTTGTTT
CTTCTGAATTATCATGTCTGGGGCTCCCTGTCCCTTACAATAGCTTACTCGTGACATTTA
AATGAATGAAATTTAACTGTTTAGC