Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0103700-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:456264:457723:1 gene:Os09g0103700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, CCHC-type domain containing protein. (Os09t0103700-01)
Sequence

ATGCCGGCGACAGCGGGGCGCGTGCGCATGCCCGCCAACAACCGCGTCCACAGCAGCGCG
GCGTTGCAGACCCACGGCATCTGGCAGAGCGCCATCGGCTACGACCCCTACGCCCCGGAG
AACAACAAGCACCAGCCTCCCTCCTCCTCCGTCTCCGCCAACGCCGCCGCCGCCAACGCC
GCCGCCGCATCCGCCCCATCCGCCTCCGCTCCTTCCTCCTCCTCCGCCGCCGCCTCCTCC
GACAACGCCTATACCAGCTTCCAGGGCCTCCTCGCGCTCGCCCGCATCACCGGCTCCAAC
TCCGACGAGACCCGCGGCGCCTGCAGGAAGTGCGGCCGCGTCGGCCACCTCACCTTCCAG
TGCCGCAACTTCCTCTCCGTCAAGGAGGACCTCGACATGGAGGACGATATTGATGCCGGG
ATTCGGGCCGCCTCGCAGGCCAACGCCCAGGCCAAGTTGGACGAGTTCAGGAAGAAGACC
TCCGGAGGCAAGGACGCCGACGAGGGCTCCGATGACGAGGATGAGGACGACGAGGAAGAC
AGCGATGATTCCTCTGATTCGGACATCGATCCTGAGCTGGAAAGGATAATCGCTGAGCGT
GAGCGTGCCAAGAGTGGCAGGAAGCATTCAAGGGATGAAGAGAAGAAGACAAGCCGCCAT
AGGAGCAGCAGCAGGGGAAGGTCCAAGCACAGGAGGAGCACCAAGAGGAGTGATACCGAG
GACGACTTAGAGGAAGAGAGGAGCAAGGACAAGAAGAAGAAGAGTAGGCGCAAGAGGCAT
GAAAGATCAGATGAGGACAGCGAGAGTGATTCTGACAAGAAGAGGCATAGGAAGAGCAGG
AAGGACAGGAAGAGGCGTAGGAGCCATCGCAGGAGTGATGACACATCGGATGAGGATGAG
TCTGGAGGTGAAGACAGGAGGCGTCGTCGCCATCGCAAGCGCCAGCACCACCACAGGAAG
GGTGCATCCGACGGTGATTCTGGAAGTGGTGCCAGTGACTCTGCAGATGATAGGAAGCGA
TCTAGCAGGCGGAGAAGGCACCGTAAGTCAGAAAGTAGTGGATCAGATGGTGATGAACGA
CATGGTCAGGGGGCAAAGCGGAGCAAGGAAAAGAGGGGCAAAGAAGAGTGCTGA

Peptide Sequence

PEP ID

Os09t0103700-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:456264:457723:1 gene:Os09g0103700 transcript:Os09t0103700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, CCHC-type domain containing protein. (Os09t0103700-01)
Sequence

MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPENNKHQPPSSSVSANAAAANA
AAASAPSASAPSSSSAAASSDNAYTSFQGLLALARITGSNSDETRGACRKCGRVGHLTFQ
CRNFLSVKEDLDMEDDIDAGIRAASQANAQAKLDEFRKKTSGGKDADEGSDDEDEDDEED
SDDSSDSDIDPELERIIAERERAKSGRKHSRDEEKKTSRHRSSSRGRSKHRRSTKRSDTE
DDLEEERSKDKKKKSRRKRHERSDEDSESDSDKKRHRKSRKDRKRRRSHRRSDDTSDEDE
SGGEDRRRRRHRKRQHHHRKGASDGDSGSGASDSADDRKRSSRRRRHRKSESSGSDGDER
HGQGAKRSKEKRGKEEC

Transcript Sequence

Transcript ID

Os09t0103700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:456264:457723:1 gene:Os09g0103700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, CCHC-type domain containing protein. (Os09t0103700-01)
Sequence

ATTCGGCGGCCGCACCCTCGATCCAAAATCCCCAATTCGCCTTCCACGAAACCCTAACCC
TAGTTCTCCGTCTCCGGCGGGCTCTACCGGCGGCGAGGCAAGATGCCGGCGACAGCGGGG
CGCGTGCGCATGCCCGCCAACAACCGCGTCCACAGCAGCGCGGCGTTGCAGACCCACGGC
ATCTGGCAGAGCGCCATCGGCTACGACCCCTACGCCCCGGAGAACAACAAGCACCAGCCT
CCCTCCTCCTCCGTCTCCGCCAACGCCGCCGCCGCCAACGCCGCCGCCGCATCCGCCCCA
TCCGCCTCCGCTCCTTCCTCCTCCTCCGCCGCCGCCTCCTCCGACAACGCCTATACCAGC
TTCCAGGGCCTCCTCGCGCTCGCCCGCATCACCGGCTCCAACTCCGACGAGACCCGCGGC
GCCTGCAGGAAGTGCGGCCGCGTCGGCCACCTCACCTTCCAGTGCCGCAACTTCCTCTCC
GTCAAGGAGGACCTCGACATGGAGGACGATATTGATGCCGGGATTCGGGCCGCCTCGCAG
GCCAACGCCCAGGCCAAGTTGGACGAGTTCAGGAAGAAGACCTCCGGAGGCAAGGACGCC
GACGAGGGCTCCGATGACGAGGATGAGGACGACGAGGAAGACAGCGATGATTCCTCTGAT
TCGGACATCGATCCTGAGCTGGAAAGGATAATCGCTGAGCGTGAGCGTGCCAAGAGTGGC
AGGAAGCATTCAAGGGATGAAGAGAAGAAGACAAGCCGCCATAGGAGCAGCAGCAGGGGA
AGGTCCAAGCACAGGAGGAGCACCAAGAGGAGTGATACCGAGGACGACTTAGAGGAAGAG
AGGAGCAAGGACAAGAAGAAGAAGAGTAGGCGCAAGAGGCATGAAAGATCAGATGAGGAC
AGCGAGAGTGATTCTGACAAGAAGAGGCATAGGAAGAGCAGGAAGGACAGGAAGAGGCGT
AGGAGCCATCGCAGGAGTGATGACACATCGGATGAGGATGAGTCTGGAGGTGAAGACAGG
AGGCGTCGTCGCCATCGCAAGCGCCAGCACCACCACAGGAAGGGTGCATCCGACGGTGAT
TCTGGAAGTGGTGCCAGTGACTCTGCAGATGATAGGAAGCGATCTAGCAGGCGGAGAAGG
CACCGTAAGTCAGAAAGTAGTGGATCAGATGGTGATGAACGACATGGTCAGGGGGCAAAG
CGGAGCAAGGAAAAGAGGGGCAAAGAAGAGTGCTGAAGTGGTAATTTGCTCTCAAGTGAT
ATTATTTACACCCTCTATTTTACCGACAATGCTTATCTTTGTCCTCTGTCCTGGTGTATG
TTGTTATTTCAAGCATCATGATTGATATGTATAAGTGTAGTACTTTGTTCCAGTGAGTGA
ACTTCAAACTTAATATGCATAGAACGTTTTACCTTGAACTTGATAGTTTGTCTGTATTTT
AATGAATTGGCTTTGTTTCT