Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0567200-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:28401039:28408769:-1 gene:Os08g0567200 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif-related domain containing protein. (Os08t0567200-01);Similar to RNA recognition motif (RRM)-containing protein. (Os08t0567200-02)
Sequence	ATGGCGATGGCGAGCACCTACCAGTACCAGCAGTACCAGCAGCTGCAGCAGGCGCAGCAG CTCTTCCAACGCGACGCGCAGACCATCACCCCCGAGGCGCTCGAGAGCGTCAAGGCCGCC CTCGCCACCAGCGACGTCCTCGACCCCGCCAATGCCAGAGCCACCGCAACCTCCTCCTCC GACCCTGCCGCCAAGAAGAAAGCCATCCCCCGCCGCGCCGCCGGCCAATCCTGGGAGGAT CCCACCCTCACCGACTGGCCCGACAATGACTATCGCTTATTTTGTGGAGATCTGGGCAAT GAAGTCAATGACGACGTCCTCTCAAAAGCTTTTTCACGGTTCCCCTCCTTCAACATGGCA AGGGTTGTTCGAGATAAGAGAACTGGCAAAACAAAAGGATATGGATTTGTGAGCTTTTCA AACCCTACTGACCTTGCTGGAGCAATTAAAGAAATGAATGGGAAGTATGTTGGGAACCGC CCTATTAAATTGCGTAAAAGCAATTGGAAAGAGAGGACCGATGTTGATGCTCTAGAAAGA CAGAAGAATCACATCCAGAAGAAACCTAAAATGCCCAAGAAAAGTATCCTTCACAAGTAA

Peptide Sequence

PEP ID	Os08t0567200-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:28401039:28408769:-1 gene:Os08g0567200 transcript:Os08t0567200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif-related domain containing protein. (Os08t0567200-01);Similar to RNA recognition motif (RRM)-containing protein. (Os08t0567200-02)
Sequence	MAMASTYQYQQYQQLQQAQQLFQRDAQTITPEALESVKAALATSDVLDPANARATATSSS DPAAKKKAIPRRAAGQSWEDPTLTDWPDNDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMA RVVRDKRTGKTKGYGFVSFSNPTDLAGAIKEMNGKYVGNRPIKLRKSNWKERTDVDALER QKNHIQKKPKMPKKSILHK

Transcript Sequence

Transcript ID	Os08t0567200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:28401039:28408769:-1 gene:Os08g0567200 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif-related domain containing protein. (Os08t0567200-01);Similar to RNA recognition motif (RRM)-containing protein. (Os08t0567200-02)
Sequence	CCTTCCATCTGCAGCAGCAACCGCCGCAGCCGCCGCCGATGGCGATGGCGAGCACCTACC AGTACCAGCAGTACCAGCAGCTGCAGCAGGCGCAGCAGCTCTTCCAACGCGACGCGCAGA CCATCACCCCCGAGGCGCTCGAGAGCGTCAAGGCCGCCCTCGCCACCAGCGACGTCCTCG ACCCCGCCAATGCCAGAGCCACCGCAACCTCCTCCTCCGACCCTGCCGCCAAGAAGAAAG CCATCCCCCGCCGCGCCGCCGGCCAATCCTGGGAGGATCCCACCCTCACCGACTGGCCCG ACAATGACTATCGCTTATTTTGTGGAGATCTGGGCAATGAAGTCAATGACGACGTCCTCT CAAAAGCTTTTTCACGGTTCCCCTCCTTCAACATGGCAAGGGTTGTTCGAGATAAGAGAA CTGGCAAAACAAAAGGATATGGATTTGTGAGCTTTTCAAACCCTACTGACCTTGCTGGAG CAATTAAAGAAATGAATGGGAAGTATGTTGGGAACCGCCCTATTAAATTGCGTAAAAGCA ATTGGAAAGAGAGGACCGATGTTGATGCTCTAGAAAGACAGAAGAATCACATCCAGAAGA AACCTAAAATGCCCAAGAAAAGTATCCTTCACAAGTAAAGCTATATTAGCCCTACTAAGC GCCATCCATGTAAACATACTTTGTTGGGTGATGGGGCTCAAGAAAACTACTCTTACTGCA AAGGTTGTGGACCAGGGAGGGTGTACATTTGACTGCAGCTGTCTGTTAGCAGAGTGGTGC GTCGCTTCTAAGCAATTTTTCTTCTTACGACAAGCTGATGTTTACATCTGCAGGAAGTTT GTTAAAGCTGAAGCTAGTTTTGCTGATGTTTACTGAGAATGACTCCCTAGAATGGATGGT TTGCTTAAGGTGGTAATGATGTGTATTTAGATATGGCATTTGCATTTAAGGATGGCATTG CAATGTAATAAAGATGTTGTTGGTATTGTAGTTTATCTTATAAAGTGGCATCGCAGT