Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0566900-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:28388405:28391044:1 gene:Os08g0566900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mpv17/PMP22 family protein. (Os08t0566900-01)
Sequence

ATGTCTGATGTGGTGGCTATGGCGGGGCAGGCGTACATGCGGCAGCTCCAAGCCCACCCG
CTGCGCACCAAGGCCATCACCTCCGGCGTTCTCGCCGGCTGCAGCGACGCCATCGCCCAG
AAGATCTCCGGCGTCCCCAACCTCCAGCGCAGGAGGCTCCTCCTCATCATGCTCTATGGA
TTTGCTTATGCGGGACCGTTTGGCCATTTTCTCCACAAGCTGATGGACAGGTTTTTCAAG
GGAAAGAAAGGAAAAGAAACTACAGCCAAGAAGGTCTTAGTGGAGCAACTAACTGCGTCA
CCATGGAACAATATGATGTTTATGATGTACTATGGTCTGGTGGTTGAAGGGAGACCTTTT
AGTCAAGTGAAGAGCAAGCTCAAGAAAGACTACGCATCTGTCCAGTTGACAGCTTGGAAG
TTCTGGCCAATTGTTAGTTGGATAAACTATGAATACATGCCGCTCCAGCTCCGAGTTCTT
TTCCACAGCTTTGTTGCATCGTGCTGGGCAGTATTTCTGAACCTGAAAGCAGCAAGGTCC
ATTGCCACTAGTAAGAAGGCGTAA

Peptide Sequence

PEP ID

Os08t0566900-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:28388405:28391044:1 gene:Os08g0566900 transcript:Os08t0566900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mpv17/PMP22 family protein. (Os08t0566900-01)
Sequence

MSDVVAMAGQAYMRQLQAHPLRTKAITSGVLAGCSDAIAQKISGVPNLQRRRLLLIMLYG
FAYAGPFGHFLHKLMDRFFKGKKGKETTAKKVLVEQLTASPWNNMMFMMYYGLVVEGRPF
SQVKSKLKKDYASVQLTAWKFWPIVSWINYEYMPLQLRVLFHSFVASCWAVFLNLKAARS
IATSKKA

Transcript Sequence

Transcript ID

Os08t0566900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:28388405:28391044:1 gene:Os08g0566900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mpv17/PMP22 family protein. (Os08t0566900-01)
Sequence

GGAGTATTAGACTACTCGTAGTAGTTGTTGCAAATCTGGTCAGAGGAGGAGGAGAGCATC
CAAGCCTAGCTAGGATCGATCGACGATGTCTGATGTGGTGGCTATGGCGGGGCAGGCGTA
CATGCGGCAGCTCCAAGCCCACCCGCTGCGCACCAAGGCCATCACCTCCGGCGTTCTCGC
CGGCTGCAGCGACGCCATCGCCCAGAAGATCTCCGGCGTCCCCAACCTCCAGCGCAGGAG
GCTCCTCCTCATCATGCTCTATGGATTTGCTTATGCGGGACCGTTTGGCCATTTTCTCCA
CAAGCTGATGGACAGGTTTTTCAAGGGAAAGAAAGGAAAAGAAACTACAGCCAAGAAGGT
CTTAGTGGAGCAACTAACTGCGTCACCATGGAACAATATGATGTTTATGATGTACTATGG
TCTGGTGGTTGAAGGGAGACCTTTTAGTCAAGTGAAGAGCAAGCTCAAGAAAGACTACGC
ATCTGTCCAGTTGACAGCTTGGAAGTTCTGGCCAATTGTTAGTTGGATAAACTATGAATA
CATGCCGCTCCAGCTCCGAGTTCTTTTCCACAGCTTTGTTGCATCGTGCTGGGCAGTATT
TCTGAACCTGAAAGCAGCAAGGTCCATTGCCACTAGTAAGAAGGCGTAAAACAGGTAGCA
CGGCATGCTGTTGCTGCCGACGTTCTACTGGTCAGGACTCACTAAGAAGAAGAAACCGGA
CTCAAACGGCTAAGATTAGATGCCGTCATTTTACTCTTTCAGTCTGCTTGTTGAACTAAT
TTGTACTACGTACTAACTTTATCCCTGATATAAAACGACGTATGTTATTT