Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0564800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:28295077:28305341:-1 gene:Os08g0564800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 10, Mediator 15_2 description:Coactivator CBP, KIX domain containing protein. (Os08t0564800-01)
Sequence	ATGGATGGCGGCGGCGGCGGCAACTGGAGGCCCACCCAGGGGGCCGACCCCGCCGCCTCT GGGGGCATCGATCCCAACGCCCCGGCCCCCGCCCTCGCCGGCGGCGACTGGCGCTCCCAG CTCCAGTCGGAGGCCCGCAACAGGATCGTCAACAAGATAATGGACACTCTGAAGAAGCAT CTACCAGTATCAGTGCCTGAGGGGTTGAATGAACTTCAAAAGATAGCAGTGCGATTTGAA GAGAAAATCTATACTGCAGCCACCAGCCAGTCTGATTACTTGCGGAAGATTTCTCTAAAA ATGCTCTCTATGGAGACAAAGACTCAACAGAATCCTGGAAACGCCCAAGTGATTCAAAAC CAAAATCCCCCTGGCTCAGTACCTGGACTCCCTCAAGGCAGTAATCCAACACAGTCATCA GCGATCCCTTTGATGTCTCAGCAACAGGCCCGGCAGCCAAATTCTACGTCTGTCCAATCT TCTCTTACTAATCTTGGTCAGAACTTGCCAGGTGTCAACCAGACATCCACACTGCAGAAC ATGTCTGGCATGCCGCAGAACACTATGAATAATGGCTTGGCACAAGGCGCTTCACAAGAT ATATATGCTACGCAAAGGCAAATGGCAGGAAGGCAGCAGCAGCAGCAACAATCTCAGAAC CAATTAATTTACCAGCAGCAGCAAATTATGATGAAGCAGAAGTTGCAGCAAAATTCACTT ATGCAACAGCAATCTTTGTTGCAGCCAACACAGATGCAATCCTCACAACAGCCAATGATG CAAATACCATCTAGCCTCCAACCCGGGCAGTCCATTCCGCAGACACAACCAATGGTACAG TCATCATCTCAGGGTGGTATTCAACAGAATGCTTTGAACTCGGTACCACAATCTGTGCAA TCGTTACTCCAGCAACCTACACAATCTGCTATGAGGCAGCAGCAACACTCACAGTCCTCC ATGCATCCACAGCCTTCTCTGCAGCAAGCTCAACCAACTCAGCAGCCTAACATTCCTTTG CAACATCAATTAATGGGCCAGCAGCAAAATTTACAACAAAATCAGTTAATTGGTCAGCAG AATGGTGCTGTGGATATGCCACAGCAACAGAGACTACCAGTTCAATCGAATAATCTTTTG AATATGCAGCAGACACAGCAGATGTTGAACCAGCAGTCTATGCCCTCGCACCAGCAGCAA CAATTGGGCTCCCAGGCAAATATTTCAACTCTACAACAGCAGCAGCAACAAAATCAGCAG CAACAACAGCTTCTTGGAACTGTGCCTAATGTTCCGAACATTCAACGAATGCATATGCTA CAAACAAAGGCAGTTCAGCAACCACAGCAGCAGCAGCATGCTCAGCAGTCATCACTGGGT TTGATGCAGCCTCAATCACAACATAACCAACTTCAGCAATCACAGCAGCATCTTATGTCA CAATTCCAAGCTCAACCTAACCAGCTGCAGCAACAACTGGGAATGCCGCAGCAACCTCCC ATGCAACAAAGGCTTCAAACGTCAGCTGGCATGCTCTTGCAACAAAATAACATTGATCAA CAAAAGCAATTTATGCAGGCACAAAGGGGCCTTCAAGAAGTTTCGTCTAGCACATCTGTG GACTCCACTGCCCAAACAGGTCATACAGGTACAGGTACAGGAGATTGGCAAGAGGAGGCA TATCAAATGGTGAAGAACTTAAAGGACCAATATTTTCCTGAATTAAATGATTTGTACAAT AAGATCTCTTTGAAGCTACAGCATGTTGACAACATGGTTCCACCTCAAAAGCCAACAGAA CAGTATGAAAAGATGAAGAATTTCAAACTGATGTTGGAGCGTACAATGCATGTTCTGCAA TTGAACAAGGGCAACATTCAGCCTGCCCTTAGGGACAAAATTCCTGCGTACGAGAGGCAA ATTATCAGTATCCTAAATTCGCAAAAGAGGCCAAGGGTGCAAGGCCAGCAGACACAATTT CAACAATCTGCTGGGCAAGGTCCTACCTCTAACATTCCGCAACAACAACAACCTTCCCAA GGTTTGCAGCAGCATGATAACCATACTAATCAGATGCCTCAAGCAAGCATGCCAAGTATG AGCACCGGATTACAATCCTCAGGTGCAGCTGGTATCCAACATTTACCTGCATCCCCAGCA ACAAACTTTGGTGTTCCAGCAACACAGCAAAATGTCACAAATGCACCACAGGCTACCTCT AATTTGGAGGTTACTCAAGGAAGCAATTTTAATTCTTTGCAGCATGGTTCAATGAGTGGT GCTTTGCAACAGGGAAGCACTGGGCCCATGCAGGGTACACTGAATGCACAACAGCAGGCC AGTAGTAGCATGTTATCTCACAACTCAGTAGGTACAATGCAGGCTAATGCCAATTCCATG CAAGCCAACGCAAATTCATTACAGCAGCTGAAGCAGCAACAGCAGGAGCATCATATGATG CAGAATCAGCAAATGAAGCGTCAAATGTTTCAGCAGTTCCAGCAAAAACAAATGCTTCAG CAGCAACTCCCAGCACAGCAACAATTACAGAAACAGCAGCAATCACAGATGCAGGTTCCA CAGCATCATTCTGGAAATGATGCAAACGAGCTGAAGGTTAGACAAGGAGCTGCAATGAAA CCTGGGATTTATCAACAGCACTTGGCTCAGCGCAATAACTTTTATAATCAGCAAATGAAA CAGGGCAGTGCTTTCCCAATTTCGTCACCACAAAACCTCCAAGCATCATCCCCCCAAATT TCACACCATTCTCCTCAGGTTGATCAGCACAATCTCTTGCCGTCTCAAGTGAAGACCGGG ACACCATTGCAGTCAGCTAACTCACCATATATGCCATCTCCATCGCCACCTGTTGCCCCG TCTCCTATACCAGTGGATTCAGAGAAACCACTCTCCAATTTATCATCATCACTTACTAAT ACTGGTCAGGCTACACATCAGCAAACAAACATGGCGCCTCAGTCACAATCAATCGCCGTT AACACTCCAGGGATCTCGGCCTCACCCTTGTTGGCAGAATTTACAAGTGTTGATGGAAAT CAGGCTAACATGCCAACCCAAGTTCTAACCAAATCAAGTGCAGCAGAAAGGCCTTTAGAC CGCTTACTTAAAGCGTTGCGGACAACACAACGCCAGTCCTTGAGTGCTGCAGTAAGCGAC ATAGGTTCTGTTGTCAGCATGATTGACAGGATTGCTGGGTCTGCGCCTGGTAATGGTTCT AGAGCTGCTGTTGGTGAAGATTTAGTTGCTATGACAAAGTGCCGATTGCAAGCCAGGAAT TTCATAACACATGATGGGACCGGTACATCAAAGAAAATGAAGCGTGACACTAGTGCTATG CCTCTTAATGTGTCATCAGCTGGAAGTGTTAATGACAGTTTGAAGCAAACATTCAGCATA GGTACCCCTGAATTGCAGTCAACTGCAACCTCACGTGTAAAGTGGCAAAAAACCGAGATA AACCATGCTCTTATGGAGGAAATACATGAGATAAACCAACAGCTCATAGATACAGAGCTC CATGTTTGCGAGGATGATGCTGAGTCTTTTGGTGCTACATCAGAAGGGACAGAAGGGACA GTCATCAAATGCACATTTACTGCTGTGGCTGTTAGCCCCAGCTTGAAGTCCATGTTTGCA TCAGCACAGATGAGTCCAATTTTGCCATTGAGGGTGCTTGTCCCCGCTAGCTACCCTAAG TGCTCCCCGGTTCTCCTAGACAAGTTCCCAGATGAACAAAGAAACTCGGATGACCTGTCG ACCAAAGCGAGGTCGAAGTTCAGCATATTGCTTCGGGGTTTAGCTGAGCCCATGTCACTA AGAGAAATTGCGAGGACGTGGGACGCGTGTGCCCGCAAAGTAATTGCTGAGTATGCTCAA CAGACTGGTGGAGGCAGTTTCAGTTCGAGCTATGGTTGTTGGGAAAATTGCGTGGGTGCT TAA

Peptide Sequence

PEP ID	Os08t0564800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:28295077:28305341:-1 gene:Os08g0564800 transcript:Os08t0564800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 10, Mediator 15_2 description:Coactivator CBP, KIX domain containing protein. (Os08t0564800-01)
Sequence	MDGGGGGNWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKH LPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQNPGNAQVIQN QNPPGSVPGLPQGSNPTQSSAIPLMSQQQARQPNSTSVQSSLTNLGQNLPGVNQTSTLQN MSGMPQNTMNNGLAQGASQDIYATQRQMAGRQQQQQQSQNQLIYQQQQIMMKQKLQQNSL MQQQSLLQPTQMQSSQQPMMQIPSSLQPGQSIPQTQPMVQSSSQGGIQQNALNSVPQSVQ SLLQQPTQSAMRQQQHSQSSMHPQPSLQQAQPTQQPNIPLQHQLMGQQQNLQQNQLIGQQ NGAVDMPQQQRLPVQSNNLLNMQQTQQMLNQQSMPSHQQQQLGSQANISTLQQQQQQNQQ QQQLLGTVPNVPNIQRMHMLQTKAVQQPQQQQHAQQSSLGLMQPQSQHNQLQQSQQHLMS QFQAQPNQLQQQLGMPQQPPMQQRLQTSAGMLLQQNNIDQQKQFMQAQRGLQEVSSSTSV DSTAQTGHTGTGTGDWQEEAYQMVKNLKDQYFPELNDLYNKISLKLQHVDNMVPPQKPTE QYEKMKNFKLMLERTMHVLQLNKGNIQPALRDKIPAYERQIISILNSQKRPRVQGQQTQF QQSAGQGPTSNIPQQQQPSQGLQQHDNHTNQMPQASMPSMSTGLQSSGAAGIQHLPASPA TNFGVPATQQNVTNAPQATSNLEVTQGSNFNSLQHGSMSGALQQGSTGPMQGTLNAQQQA SSSMLSHNSVGTMQANANSMQANANSLQQLKQQQQEHHMMQNQQMKRQMFQQFQQKQMLQ QQLPAQQQLQKQQQSQMQVPQHHSGNDANELKVRQGAAMKPGIYQQHLAQRNNFYNQQMK QGSAFPISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLQSANSPYMPSPSPPVAP SPIPVDSEKPLSNLSSSLTNTGQATHQQTNMAPQSQSIAVNTPGISASPLLAEFTSVDGN QANMPTQVLTKSSAAERPLDRLLKALRTTQRQSLSAAVSDIGSVVSMIDRIAGSAPGNGS RAAVGEDLVAMTKCRLQARNFITHDGTGTSKKMKRDTSAMPLNVSSAGSVNDSLKQTFSI GTPELQSTATSRVKWQKTEINHALMEEIHEINQQLIDTELHVCEDDAESFGATSEGTEGT VIKCTFTAVAVSPSLKSMFASAQMSPILPLRVLVPASYPKCSPVLLDKFPDEQRNSDDLS TKARSKFSILLRGLAEPMSLREIARTWDACARKVIAEYAQQTGGGSFSSSYGCWENCVGA

Transcript Sequence

Transcript ID	Os08t0564800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:28295077:28305341:-1 gene:Os08g0564800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 10, Mediator 15_2 description:Coactivator CBP, KIX domain containing protein. (Os08t0564800-01)
Sequence	TCTTCTCCTCCGAGGCGAGGCGAGACTCCGATTCTAGCCTACCTCGCTCGCTCGCTCGCT CGCTCCGTCTTGTGGTCGCCGCCGCCACGAAGACCAAACCCTCGCAAATTGCAATCGAAG AAGAAGAAGAAGAAGAGGAGCCATGGATGGCGGCGGCGGCGGCAACTGGAGGCCCACCCA GGGGGCCGACCCCGCCGCCTCTGGGGGCATCGATCCCAACGCCCCGGCCCCCGCCCTCGC CGGCGGCGACTGGCGCTCCCAGCTCCAGTCGGAGGCCCGCAACAGGATCGTCAACAAGAT AATGGACACTCTGAAGAAGCATCTACCAGTATCAGTGCCTGAGGGGTTGAATGAACTTCA AAAGATAGCAGTGCGATTTGAAGAGAAAATCTATACTGCAGCCACCAGCCAGTCTGATTA CTTGCGGAAGATTTCTCTAAAAATGCTCTCTATGGAGACAAAGACTCAACAGAATCCTGG AAACGCCCAAGTGATTCAAAACCAAAATCCCCCTGGCTCAGTACCTGGACTCCCTCAAGG CAGTAATCCAACACAGTCATCAGCGATCCCTTTGATGTCTCAGCAACAGGCCCGGCAGCC AAATTCTACGTCTGTCCAATCTTCTCTTACTAATCTTGGTCAGAACTTGCCAGGTGTCAA CCAGACATCCACACTGCAGAACATGTCTGGCATGCCGCAGAACACTATGAATAATGGCTT GGCACAAGGCGCTTCACAAGATATATATGCTACGCAAAGGCAAATGGCAGGAAGGCAGCA GCAGCAGCAACAATCTCAGAACCAATTAATTTACCAGCAGCAGCAAATTATGATGAAGCA GAAGTTGCAGCAAAATTCACTTATGCAACAGCAATCTTTGTTGCAGCCAACACAGATGCA ATCCTCACAACAGCCAATGATGCAAATACCATCTAGCCTCCAACCCGGGCAGTCCATTCC GCAGACACAACCAATGGTACAGTCATCATCTCAGGGTGGTATTCAACAGAATGCTTTGAA CTCGGTACCACAATCTGTGCAATCGTTACTCCAGCAACCTACACAATCTGCTATGAGGCA GCAGCAACACTCACAGTCCTCCATGCATCCACAGCCTTCTCTGCAGCAAGCTCAACCAAC TCAGCAGCCTAACATTCCTTTGCAACATCAATTAATGGGCCAGCAGCAAAATTTACAACA AAATCAGTTAATTGGTCAGCAGAATGGTGCTGTGGATATGCCACAGCAACAGAGACTACC AGTTCAATCGAATAATCTTTTGAATATGCAGCAGACACAGCAGATGTTGAACCAGCAGTC TATGCCCTCGCACCAGCAGCAACAATTGGGCTCCCAGGCAAATATTTCAACTCTACAACA GCAGCAGCAACAAAATCAGCAGCAACAACAGCTTCTTGGAACTGTGCCTAATGTTCCGAA CATTCAACGAATGCATATGCTACAAACAAAGGCAGTTCAGCAACCACAGCAGCAGCAGCA TGCTCAGCAGTCATCACTGGGTTTGATGCAGCCTCAATCACAACATAACCAACTTCAGCA ATCACAGCAGCATCTTATGTCACAATTCCAAGCTCAACCTAACCAGCTGCAGCAACAACT GGGAATGCCGCAGCAACCTCCCATGCAACAAAGGCTTCAAACGTCAGCTGGCATGCTCTT GCAACAAAATAACATTGATCAACAAAAGCAATTTATGCAGGCACAAAGGGGCCTTCAAGA AGTTTCGTCTAGCACATCTGTGGACTCCACTGCCCAAACAGGTCATACAGGTACAGGTAC AGGAGATTGGCAAGAGGAGGCATATCAAATGGTGAAGAACTTAAAGGACCAATATTTTCC TGAATTAAATGATTTGTACAATAAGATCTCTTTGAAGCTACAGCATGTTGACAACATGGT TCCACCTCAAAAGCCAACAGAACAGTATGAAAAGATGAAGAATTTCAAACTGATGTTGGA GCGTACAATGCATGTTCTGCAATTGAACAAGGGCAACATTCAGCCTGCCCTTAGGGACAA AATTCCTGCGTACGAGAGGCAAATTATCAGTATCCTAAATTCGCAAAAGAGGCCAAGGGT GCAAGGCCAGCAGACACAATTTCAACAATCTGCTGGGCAAGGTCCTACCTCTAACATTCC GCAACAACAACAACCTTCCCAAGGTTTGCAGCAGCATGATAACCATACTAATCAGATGCC TCAAGCAAGCATGCCAAGTATGAGCACCGGATTACAATCCTCAGGTGCAGCTGGTATCCA ACATTTACCTGCATCCCCAGCAACAAACTTTGGTGTTCCAGCAACACAGCAAAATGTCAC AAATGCACCACAGGCTACCTCTAATTTGGAGGTTACTCAAGGAAGCAATTTTAATTCTTT GCAGCATGGTTCAATGAGTGGTGCTTTGCAACAGGGAAGCACTGGGCCCATGCAGGGTAC ACTGAATGCACAACAGCAGGCCAGTAGTAGCATGTTATCTCACAACTCAGTAGGTACAAT GCAGGCTAATGCCAATTCCATGCAAGCCAACGCAAATTCATTACAGCAGCTGAAGCAGCA ACAGCAGGAGCATCATATGATGCAGAATCAGCAAATGAAGCGTCAAATGTTTCAGCAGTT CCAGCAAAAACAAATGCTTCAGCAGCAACTCCCAGCACAGCAACAATTACAGAAACAGCA GCAATCACAGATGCAGGTTCCACAGCATCATTCTGGAAATGATGCAAACGAGCTGAAGGT TAGACAAGGAGCTGCAATGAAACCTGGGATTTATCAACAGCACTTGGCTCAGCGCAATAA CTTTTATAATCAGCAAATGAAACAGGGCAGTGCTTTCCCAATTTCGTCACCACAAAACCT CCAAGCATCATCCCCCCAAATTTCACACCATTCTCCTCAGGTTGATCAGCACAATCTCTT GCCGTCTCAAGTGAAGACCGGGACACCATTGCAGTCAGCTAACTCACCATATATGCCATC TCCATCGCCACCTGTTGCCCCGTCTCCTATACCAGTGGATTCAGAGAAACCACTCTCCAA TTTATCATCATCACTTACTAATACTGGTCAGGCTACACATCAGCAAACAAACATGGCGCC TCAGTCACAATCAATCGCCGTTAACACTCCAGGGATCTCGGCCTCACCCTTGTTGGCAGA ATTTACAAGTGTTGATGGAAATCAGGCTAACATGCCAACCCAAGTTCTAACCAAATCAAG TGCAGCAGAAAGGCCTTTAGACCGCTTACTTAAAGCGTTGCGGACAACACAACGCCAGTC CTTGAGTGCTGCAGTAAGCGACATAGGTTCTGTTGTCAGCATGATTGACAGGATTGCTGG GTCTGCGCCTGGTAATGGTTCTAGAGCTGCTGTTGGTGAAGATTTAGTTGCTATGACAAA GTGCCGATTGCAAGCCAGGAATTTCATAACACATGATGGGACCGGTACATCAAAGAAAAT GAAGCGTGACACTAGTGCTATGCCTCTTAATGTGTCATCAGCTGGAAGTGTTAATGACAG TTTGAAGCAAACATTCAGCATAGGTACCCCTGAATTGCAGTCAACTGCAACCTCACGTGT AAAGTGGCAAAAAACCGAGATAAACCATGCTCTTATGGAGGAAATACATGAGATAAACCA ACAGCTCATAGATACAGAGCTCCATGTTTGCGAGGATGATGCTGAGTCTTTTGGTGCTAC ATCAGAAGGGACAGAAGGGACAGTCATCAAATGCACATTTACTGCTGTGGCTGTTAGCCC CAGCTTGAAGTCCATGTTTGCATCAGCACAGATGAGTCCAATTTTGCCATTGAGGGTGCT TGTCCCCGCTAGCTACCCTAAGTGCTCCCCGGTTCTCCTAGACAAGTTCCCAGATGAACA AAGAAACTCGGATGACCTGTCGACCAAAGCGAGGTCGAAGTTCAGCATATTGCTTCGGGG TTTAGCTGAGCCCATGTCACTAAGAGAAATTGCGAGGACGTGGGACGCGTGTGCCCGCAA AGTAATTGCTGAGTATGCTCAACAGACTGGTGGAGGCAGTTTCAGTTCGAGCTATGGTTG TTGGGAAAATTGCGTGGGTGCTTAATCCCCATTCTTCTTCAGTCCTGCTGGCACCAATCT TCGTTTTGCATCGATATTGTGCGATCGCTTGCACGCCCTTAACTGGAACGGTTAATGCAT CGCTCTATAAATATATGCACATAAATATATGTAACCATAATTAACATTTTAGCAAACATG CAATTGCTACTGGTGTGTACTTATTTATTATGTGTGGTTGTACTTTTGGAAATCCTCCCT GTTTACTAGCTGGATTTGGTAGCGGCCCCTCTTGTACAGAACAGTCTACATCTCCAGCCT GGTTTGATTCTAATATAAATATACTGTGAGATCGCTGCTCGT