Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0564100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:28250636:28253966:-1 gene:Os08g0564100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER F FAMILY MEMBER 4 description:Similar to ATP-binding cassette, sub-family F, member 2 (Iron inhibited ABC transporter 2) (HUSSY-18). (Os08t0564100-01)
Sequence	ATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCTCAGAAGAAGGCCGCCGCCGCCGCCAAG AGGGGCGCCAAGGCCTCCTCCTCCTCCTCCTCTTCCTCCTCCGCCGCCGATAAAGCGGCC AACGGTATCGCCGCGCTTAAGCTTTCCGATCGCACCTGCACCGGAGTCCTCGCCTCCCAT CCGCTCTCCCGCGATATCCACATAGAGTCCCTCTCATTAACATTTCATGGCCATGACCTT ATTGTTGATTCTGAGTTGGAGCTCAACTATGGGAGGCGTTACGGTTTGCTCGGCCTAAAT GGCTGTGGCAAATCTACTCTGCTCACAGCCATAGGCTGCAGGGAACTCCCTATCCCTGAA CACATGGATATTTACCATCTCTCCAGTGAGATTGAGGCTTCAGATATGTCTGCGCTACAG GCTGTTATCTGTTGTGACGAAGAGAGGATGAAGTTGGAAAAGGAAGCTGAAATTTTGTCT GCTCAGGATGATGGTGGCGGTGATGCTTTGGATCGTATATATGAGCGGTTAGAAGCACTT GATGCATCTACTGCTGAAAAGCGTGCTGCTGAGATATTGTTTGGTTTGGGCTTTAATAAA CAAATGCAGGCAAAGAAAACTCAGGATTTTTCTGGTGGTTGGCGTATGAGGATTGCTTTG GCAAGAGCTTTGTTTATGAATCCAACCATCCTTTTGCTTGATGAGCCAACAAACCATCTT GATCTTGAGGCTTGTGTCTGGCTGGAAGAGACACTAAAGAAGTTTGATCGTATACTTGTT GTCATATCACACTCACAAGATTTCCTAAATGGAGTTTGCACTAACATCATCCATATGCAG AGCAAGAAGCTCAAGTTATATTCTGGTAACTATGACCAGTACGTTCAAACTCGTTCTGAG CTTGAAGAGAATCAAATGAAGCAGTACAAATGGGAGCAGGAACAGATTGCTTCAATGAAG GAGTACATTGCACGTTTTGGCCATGGATCTGCAAAGCTTGCTCGTCAAGCTCAGAGCAAA GAGAAAACTCTTGCTAAGATGGAACGAGGTGGGCTCACTGAGAAGGTTGTCAGGGACAAG GTACTGGTGTTCCGCTTTACAGATGTTGGCAAACTTCCACCACCAGTGCTGCAGTTTGTT GAAGTCTCATTCGGGTATACCCCAGATAACCTCATCTACAAGAATCTCGACTTTGGTGTT GATCTTGACTCTAGAATCGCACTGGTTGGCCCCAATGGTGCGGGCAAGAGTACTCTTCTG AAGCTCATGACAGGTGACCTAGCTCCATTAGATGGTATGGTCAGGCGCCACAACCACCTT CGAATTGCGCAGTATCATCAGCATCTCGCAGAGAAGCTGGACCTGGACATGCCGGCCCTA CAGTACATGATGAGGGAATACCCTGGGAATGAGGAGGAGAAGATGAGGGCTGCAATTGGT AAGTTTGGCCTGTCTGGGAAGGCGCAGGTGATGCCAATGAGGAATCTCTCTGATGGGCAG AGGAGCCGCGTCATCTTTGCGTGGCTGGCTTACAGGCAGCCTCAACTGCTGCTGCTTGAC GAGCCGACGAACCATCTGGACATTGAGACCATCGATTCTCTGGCTGAGGCACTGAACGAG TGGGACGGTGGTTTGGTCCTGGTGAGTCATGACTTCAGGCTTATCAACCAGGTTGCTCAA GAGATTTGGGTGTGCGAGAAGCAGGCGGTGACCAGGTGGGAAGGTGATATCATGGACTTC AAGGAGCACTTGAGGAGCAGGGCTGGTCTCTCTGACTAG

Peptide Sequence

PEP ID	Os08t0564100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:28250636:28253966:-1 gene:Os08g0564100 transcript:Os08t0564100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER F FAMILY MEMBER 4 description:Similar to ATP-binding cassette, sub-family F, member 2 (Iron inhibited ABC transporter 2) (HUSSY-18). (Os08t0564100-01)
Sequence	MVSDASKKKAAQKKAAAAAKRGAKASSSSSSSSSAADKAANGIAALKLSDRTCTGVLASH PLSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPE HMDIYHLSSEIEASDMSALQAVICCDEERMKLEKEAEILSAQDDGGGDALDRIYERLEAL DASTAEKRAAEILFGLGFNKQMQAKKTQDFSGGWRMRIALARALFMNPTILLLDEPTNHL DLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQSKKLKLYSGNYDQYVQTRSE LEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDK VLVFRFTDVGKLPPPVLQFVEVSFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGKSTLL KLMTGDLAPLDGMVRRHNHLRIAQYHQHLAEKLDLDMPALQYMMREYPGNEEEKMRAAIG KFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPQLLLLDEPTNHLDIETIDSLAEALNE WDGGLVLVSHDFRLINQVAQEIWVCEKQAVTRWEGDIMDFKEHLRSRAGLSD

Transcript Sequence

Transcript ID	Os08t0564100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:28250636:28253966:-1 gene:Os08g0564100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER F FAMILY MEMBER 4 description:Similar to ATP-binding cassette, sub-family F, member 2 (Iron inhibited ABC transporter 2) (HUSSY-18). (Os08t0564100-01)
Sequence	ACAACTACTCTCCCTCCCGCCGCCGCCACCGTAGTCTACCCTACTCCCGCACCGCAGCCA TGGTGTCCGACGCCAGCAAGAAGAAGGCGGCTCAGAAGAAGGCCGCCGCCGCCGCCAAGA GGGGCGCCAAGGCCTCCTCCTCCTCCTCCTCTTCCTCCTCCGCCGCCGATAAAGCGGCCA ACGGTATCGCCGCGCTTAAGCTTTCCGATCGCACCTGCACCGGAGTCCTCGCCTCCCATC CGCTCTCCCGCGATATCCACATAGAGTCCCTCTCATTAACATTTCATGGCCATGACCTTA TTGTTGATTCTGAGTTGGAGCTCAACTATGGGAGGCGTTACGGTTTGCTCGGCCTAAATG GCTGTGGCAAATCTACTCTGCTCACAGCCATAGGCTGCAGGGAACTCCCTATCCCTGAAC ACATGGATATTTACCATCTCTCCAGTGAGATTGAGGCTTCAGATATGTCTGCGCTACAGG CTGTTATCTGTTGTGACGAAGAGAGGATGAAGTTGGAAAAGGAAGCTGAAATTTTGTCTG CTCAGGATGATGGTGGCGGTGATGCTTTGGATCGTATATATGAGCGGTTAGAAGCACTTG ATGCATCTACTGCTGAAAAGCGTGCTGCTGAGATATTGTTTGGTTTGGGCTTTAATAAAC AAATGCAGGCAAAGAAAACTCAGGATTTTTCTGGTGGTTGGCGTATGAGGATTGCTTTGG CAAGAGCTTTGTTTATGAATCCAACCATCCTTTTGCTTGATGAGCCAACAAACCATCTTG ATCTTGAGGCTTGTGTCTGGCTGGAAGAGACACTAAAGAAGTTTGATCGTATACTTGTTG TCATATCACACTCACAAGATTTCCTAAATGGAGTTTGCACTAACATCATCCATATGCAGA GCAAGAAGCTCAAGTTATATTCTGGTAACTATGACCAGTACGTTCAAACTCGTTCTGAGC TTGAAGAGAATCAAATGAAGCAGTACAAATGGGAGCAGGAACAGATTGCTTCAATGAAGG AGTACATTGCACGTTTTGGCCATGGATCTGCAAAGCTTGCTCGTCAAGCTCAGAGCAAAG AGAAAACTCTTGCTAAGATGGAACGAGGTGGGCTCACTGAGAAGGTTGTCAGGGACAAGG TACTGGTGTTCCGCTTTACAGATGTTGGCAAACTTCCACCACCAGTGCTGCAGTTTGTTG AAGTCTCATTCGGGTATACCCCAGATAACCTCATCTACAAGAATCTCGACTTTGGTGTTG ATCTTGACTCTAGAATCGCACTGGTTGGCCCCAATGGTGCGGGCAAGAGTACTCTTCTGA AGCTCATGACAGGTGACCTAGCTCCATTAGATGGTATGGTCAGGCGCCACAACCACCTTC GAATTGCGCAGTATCATCAGCATCTCGCAGAGAAGCTGGACCTGGACATGCCGGCCCTAC AGTACATGATGAGGGAATACCCTGGGAATGAGGAGGAGAAGATGAGGGCTGCAATTGGTA AGTTTGGCCTGTCTGGGAAGGCGCAGGTGATGCCAATGAGGAATCTCTCTGATGGGCAGA GGAGCCGCGTCATCTTTGCGTGGCTGGCTTACAGGCAGCCTCAACTGCTGCTGCTTGACG AGCCGACGAACCATCTGGACATTGAGACCATCGATTCTCTGGCTGAGGCACTGAACGAGT GGGACGGTGGTTTGGTCCTGGTGAGTCATGACTTCAGGCTTATCAACCAGGTTGCTCAAG AGATTTGGGTGTGCGAGAAGCAGGCGGTGACCAGGTGGGAAGGTGATATCATGGACTTCA AGGAGCACTTGAGGAGCAGGGCTGGTCTCTCTGACTAGTTCTATCTGCCCTTCGTTTTTA TCTTCCTCTCTTGACAGCTCCTCGGAGGTTTATTATAATAGCCAAACCAAGTTTTGTCTT GTATCTTGGAGTCTAATTTATTTGTAGTAGCCTGCTATCTTAATTATCACTATTGC