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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0563500-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:28220313:28221038:-1 gene:Os08g0563500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0563500-00)
Sequence

ATGGGTTCAGCTCTTTCGGGCAGCGGCAGCGGGAGCTTGTTGGTCCTCTCCGTCTCCGTC
GTCGGCATCCTTTTCACCTCCATCCTCCTCCTTGCCTACTACCTCTTCCTCGCCTGCTCA
TGGCGCCGCCGTTCCCACCAAACTGCACGACCCACGCCGCCTCTTCCTTCTTTCTTCTTA
GCCGCCGATCAACCCCGCCGCGGCCTCGGCCTGGAGGAGGCGGCCATCCGCCGCATACCA
ACGCTCCGCTACCAGCAGCAGCAGCAGCACAACAAGCAGCAGCAGTGCGGCGTGTGCCTG
GGCGAGTTCCGCGAGGGGGAGAGGCTCAGGCGGCTGCCCCCCTGCCTCCACTCCTTCCAC
ATCGACTGCATCGACGCCTGGCTCGCCACCGCCCTCACCTGCCCGCTCTGCAGGGCCCAT
GTCACCGTCGACACCAACCACATTGCTGCTGCTACCACCAGCACGCGGCACGACGACGAC
CAGTTGCTCTCCGGCGTGCACCAGCCGATGAGGAGGTCGTTCTCCCTCGACTCCTGCCAC
CTCTACCTCGCCATCATTTTGCACCCGCACCAACTCTCCGACTCCGACACCCGCAGCCGC
AGCCGCAGGGAACCAAAGCCCGCCGTCTTAGAGTCAGAGAGGCCTAGTAGGACGCTGCGC
AGATCCTTCTTCTCCTTCAGCCACACTACCACCTCCCCAGTCCCAACTCCAATCCTCCCT
ATCTGA

Peptide Sequence

PEP ID

Os08t0563500-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:28220313:28221038:-1 gene:Os08g0563500 transcript:Os08t0563500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0563500-00)
Sequence

MGSALSGSGSGSLLVLSVSVVGILFTSILLLAYYLFLACSWRRRSHQTARPTPPLPSFFL
AADQPRRGLGLEEAAIRRIPTLRYQQQQQHNKQQQCGVCLGEFREGERLRRLPPCLHSFH
IDCIDAWLATALTCPLCRAHVTVDTNHIAAATTSTRHDDDQLLSGVHQPMRRSFSLDSCH
LYLAIILHPHQLSDSDTRSRSRREPKPAVLESERPSRTLRRSFFSFSHTTTSPVPTPILP
I

Transcript Sequence

Transcript ID

Os08t0563500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:28220313:28221038:-1 gene:Os08g0563500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0563500-00)
Sequence

ATGGGTTCAGCTCTTTCGGGCAGCGGCAGCGGGAGCTTGTTGGTCCTCTCCGTCTCCGTC
GTCGGCATCCTTTTCACCTCCATCCTCCTCCTTGCCTACTACCTCTTCCTCGCCTGCTCA
TGGCGCCGCCGTTCCCACCAAACTGCACGACCCACGCCGCCTCTTCCTTCTTTCTTCTTA
GCCGCCGATCAACCCCGCCGCGGCCTCGGCCTGGAGGAGGCGGCCATCCGCCGCATACCA
ACGCTCCGCTACCAGCAGCAGCAGCAGCACAACAAGCAGCAGCAGTGCGGCGTGTGCCTG
GGCGAGTTCCGCGAGGGGGAGAGGCTCAGGCGGCTGCCCCCCTGCCTCCACTCCTTCCAC
ATCGACTGCATCGACGCCTGGCTCGCCACCGCCCTCACCTGCCCGCTCTGCAGGGCCCAT
GTCACCGTCGACACCAACCACATTGCTGCTGCTACCACCAGCACGCGGCACGACGACGAC
CAGTTGCTCTCCGGCGTGCACCAGCCGATGAGGAGGTCGTTCTCCCTCGACTCCTGCCAC
CTCTACCTCGCCATCATTTTGCACCCGCACCAACTCTCCGACTCCGACACCCGCAGCCGC
AGCCGCAGGGAACCAAAGCCCGCCGTCTTAGAGTCAGAGAGGCCTAGTAGGACGCTGCGC
AGATCCTTCTTCTCCTTCAGCCACACTACCACCTCCCCAGTCCCAACTCCAATCCTCCCT
ATCTGA