Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0557500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27893370:27898831:1 gene:Os08g0557500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 71 description:Similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein. (Os08t0557500-01);Similar to predicted protein. (Os08t0557500-02)
Sequence	ATGGCGACGGCGAGCGATGCGCCGGCGAGCTCCACGATAACGACCGCCACGGACGACGCC GAGGTGGAGCGCGACCAGGGCAACGGCAATGGCGCCGTGTCAGCCGCACCCGCCGCCGTG GGGAAGGAGGCGGCGGCTGAGGAGGAGGAGATGATCGGCCCGGCTCCCGTGCCGCCGCGG CCGAGGAAGAAGCGCCCGCTCCAGTTCGAGCAGGCCTTCCTCGACGCCCTGCCCTCCGCG GCCATGTACGAGAAGAGCTATATGCATCGGGATGTCGTCACCCACGTCGCCGTCTCTCCT GCTGACTACTTCATCACCGGGAGCGCAGATGGACATTTGAAATTTTGGAAGAAGAAACCA GCTGGGATCGAATTTGCTAAACATTTTCGATCTCATCTCAGTCCCATTGAAGGCCTAGCT GTGAGTGTTGATGGCCTACTTTGCTGCACGATCTCCAGCGATTGGTCTGTCAAGATATAT GACGTTGTGAATTATGACATGATGTTCATGATGCGTCTCCCATTCGTTCCGGGTGCAATT GAGTGGGTTTATCGACAAGGAGATGTTAAACCAAAACTCGCTGTTAGTGATCGTAATACA CCTTTTGTTCACATATATGATACTCATTCTGGTTCAAACGATCCCATCATCTCCAAAGAG ATTCATGCTGGCCCAGTAAAGGTTATGAAATATAACCATGTTCACGATGTTGTGATATCT GCTGATGCCAAAGGACTCTTGGAATACTGGTCTCCGTCTACCCTCAAATTTCCAGAAGAC GCGGTGAACTTTCGTTTAAAAACAGACACAAATCTATTTGAAATCGCAAAATGCAAGACT AGCGTGTCTGCTATTGAGATGAGCAATGACGGCACTCAATTTGTTGTTACATCCCCTGAT CGTAGGATACGGGTATTTTGGTTCAAAACTGGGAAACTAAGACGTGTATATGATGAGTCC CTTGAGGTGGCACAAGATCTGCAGAAAAGTGATATCCCGATGTATCGTCTTGATGCTATT GATTTTGGGCGAAGAATGGCTGTTGAGAAGGAAATAGAAAAGACCGAAAATGTTCCACAG CCTAATGCTGTATTTGATGAGAGCAGCAATTTTCTTATTTATGCTACCCTTTTGGGCATA AAGATTATAAATTTGCACACAAATAAGGTTTCAAGAATCCTGGGGAAGGTAGAAAACAAT GAACGTTTTCTGAGGATTGCTCTATACCAAGGTGATAAAGGGAATAAGAAGGTTAGAAAA ATTCCTTCAGTAGCTGCCAATGTCAATGACAGCAAGGAGCCTTTATCTGACCCAACGCTG CTATGCTGTGCCTTCAAGAAGCATCGAATATATCTCTTTAGTCGTAGAGAACCTGAGGAG CCTGAAGACGCAACCAAGGGTAGGGATGTTTTCAATGAAAAACCCCCACCGGAAGAGCTT TTGGCTGTATCAGATTTAGGGAAGACTGCTACAACATCACTCCCTGATGGTGATGCATAC TTCTATGGGTGA

Peptide Sequence

PEP ID	Os08t0557500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27893370:27898831:1 gene:Os08g0557500 transcript:Os08t0557500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 71 description:Similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein. (Os08t0557500-01);Similar to predicted protein. (Os08t0557500-02)
Sequence	MATASDAPASSTITTATDDAEVERDQGNGNGAVSAAPAAVGKEAAAEEEEMIGPAPVPPR PRKKRPLQFEQAFLDALPSAAMYEKSYMHRDVVTHVAVSPADYFITGSADGHLKFWKKKP AGIEFAKHFRSHLSPIEGLAVSVDGLLCCTISSDWSVKIYDVVNYDMMFMMRLPFVPGAI EWVYRQGDVKPKLAVSDRNTPFVHIYDTHSGSNDPIISKEIHAGPVKVMKYNHVHDVVIS ADAKGLLEYWSPSTLKFPEDAVNFRLKTDTNLFEIAKCKTSVSAIEMSNDGTQFVVTSPD RRIRVFWFKTGKLRRVYDESLEVAQDLQKSDIPMYRLDAIDFGRRMAVEKEIEKTENVPQ PNAVFDESSNFLIYATLLGIKIINLHTNKVSRILGKVENNERFLRIALYQGDKGNKKVRK IPSVAANVNDSKEPLSDPTLLCCAFKKHRIYLFSRREPEEPEDATKGRDVFNEKPPPEEL LAVSDLGKTATTSLPDGDAYFYG

Transcript Sequence

Transcript ID	Os08t0557500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27893370:27898831:1 gene:Os08g0557500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 71 description:Similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein. (Os08t0557500-01);Similar to predicted protein. (Os08t0557500-02)
Sequence	GGAGCAGAAGGTCTCGAGGAGTCGAGACTTCTCTCCCCCAAATCCCCAGAACCCTAGCGG AGCTCCACCTCGAGATGGCGACGGCGAGCGATGCGCCGGCGAGCTCCACGATAACGACCG CCACGGACGACGCCGAGGTGGAGCGCGACCAGGGCAACGGCAATGGCGCCGTGTCAGCCG CACCCGCCGCCGTGGGGAAGGAGGCGGCGGCTGAGGAGGAGGAGATGATCGGCCCGGCTC CCGTGCCGCCGCGGCCGAGGAAGAAGCGCCCGCTCCAGTTCGAGCAGGCCTTCCTCGACG CCCTGCCCTCCGCGGCCATGTACGAGAAGAGCTATATGCATCGGGATGTCGTCACCCACG TCGCCGTCTCTCCTGCTGACTACTTCATCACCGGGAGCGCAGATGGACATTTGAAATTTT GGAAGAAGAAACCAGCTGGGATCGAATTTGCTAAACATTTTCGATCTCATCTCAGTCCCA TTGAAGGCCTAGCTGTGAGTGTTGATGGCCTACTTTGCTGCACGATCTCCAGCGATTGGT CTGTCAAGATATATGACGTTGTGAATTATGACATGATGTTCATGATGCGTCTCCCATTCG TTCCGGGTGCAATTGAGTGGGTTTATCGACAAGGAGATGTTAAACCAAAACTCGCTGTTA GTGATCGTAATACACCTTTTGTTCACATATATGATACTCATTCTGGTTCAAACGATCCCA TCATCTCCAAAGAGATTCATGCTGGCCCAGTAAAGGTTATGAAATATAACCATGTTCACG ATGTTGTGATATCTGCTGATGCCAAAGGACTCTTGGAATACTGGTCTCCGTCTACCCTCA AATTTCCAGAAGACGCGGTGAACTTTCGTTTAAAAACAGACACAAATCTATTTGAAATCG CAAAATGCAAGACTAGCGTGTCTGCTATTGAGATGAGCAATGACGGCACTCAATTTGTTG TTACATCCCCTGATCGTAGGATACGGGTATTTTGGTTCAAAACTGGGAAACTAAGACGTG TATATGATGAGTCCCTTGAGGTGGCACAAGATCTGCAGAAAAGTGATATCCCGATGTATC GTCTTGATGCTATTGATTTTGGGCGAAGAATGGCTGTTGAGAAGGAAATAGAAAAGACCG AAAATGTTCCACAGCCTAATGCTGTATTTGATGAGAGCAGCAATTTTCTTATTTATGCTA CCCTTTTGGGCATAAAGATTATAAATTTGCACACAAATAAGGTTTCAAGAATCCTGGGGA AGGTAGAAAACAATGAACGTTTTCTGAGGATTGCTCTATACCAAGGTGATAAAGGGAATA AGAAGGTTAGAAAAATTCCTTCAGTAGCTGCCAATGTCAATGACAGCAAGGAGCCTTTAT CTGACCCAACGCTGCTATGCTGTGCCTTCAAGAAGCATCGAATATATCTCTTTAGTCGTA GAGAACCTGAGGAGCCTGAAGACGCAACCAAGGGTAGGGATGTTTTCAATGAAAAACCCC CACCGGAAGAGCTTTTGGCTGTATCAGATTTAGGGAAGACTGCTACAACATCACTCCCTG ATGGTGATGCATACTTCTATGGGTGATATTCACTTGAGATTATATCCAGAAGAGTGTCCA AAAACTGTGGAGAATTTCACTACCCATTGCCGGAATGGTTATTATGATAATCTCATATTT CATCGTGTGATTAAAGGCTTTATGATTCAGACTGGAGACCCTTTGGGGGATGGCACTGGT GGGCAATCAATCTGGGGAAGGGAGTTCGAAGATGAATTTCACAAAAGCTTGAGACATGAT AGGCCTTTTACTCTTTCAATGGCCAATGCTGGACCAAATACCAATGGGTCCCAATTCTTT ATCACAACTGTGGCAACTCCATGGCTAGACAACAAACACACAGTGTTTGGTAGAGTTGTG AAAGGGATGGATGTTGTTCAGCAAATCGAGAAGGTCAAGACCGACAAGAATGACAAACCA TATCAGGATGTGAAGATCTTGAACGTTACAGTTCCAAAGACATAAGCTCAAACAATTGGT TTGACATTGTACGCATGAGGTTCTTCCACCCTTTGCAAGCCTGTGAAAGACAAATGTTCT GAACTTTATGTGCTGCTGTGGTGCATCGAGTTGGTCCTTCAAACCTCAACCCAGAGGCAG CACCATATTATTAGAAAGCACTGCCTTTGATGAGGTATGTGTTCCGAGTTTTAACTAGCT TTCCCATCCATAACCCAAGGGCAATGGGACTGTAACATTTTTGCTGTACACGGGATTGGT ATTGCAATTTAACAATGGAAAAAATGTAACGAGCCAGTTAGATGAGGATACATGGACGAT TTTTCCATGCATGGGTGTAAGGGCGTAAGTTTTATTTTGACTAGCCACTGAATGCTGATA CCAATTAGACTG