Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0557000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27877376:27880017:1 gene:Os08g0557000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROTEIN REPAIR L-ISOASPARTYL METHYLTRANSFERASE 1 description:L-isoaspartate methyltransferase, iso-Asp-containing protein repairing enzyme, Seed vigor and longevity (Os08t0557000-01)
Sequence	ATGGAGCACCGACTGTGGTCAAGCGGGGCTAGCGACAAGAACAAGGCAATGGTTGAGCAG CTCCAGAGGTACGGGATTATCAAGTCGAGCAAGGTCGCGCAGGTGATGGAGACCATCGAC AGGGGGCTGTTTGTGCCTCCTGGTGCTTCTCCCTATTTCGACAGCCCGATGCCCATCGGT TACAACGCCACCATTTCTGCGCCTCACATGCACGCCTCTTGCTTGGAGCTCCTGGAGAAG CACCTTCAGCCTGGCATGCGTGCTCTGGATGTTGGATCAGGCACAGGGTACCTAACAGCT TGCTTCGCGATTATGGTTGGACCAGAAGGGCGAGCAGTTGGTGTTGAACATATCCCAGAG TTGGTTACTTCGTCTATTGAAAACATCAAGAAAAGTGCAGCGGCTCCACAGTTAACTGAT GGATCCCTCAGTATACATATTACCGATGGCAGAGAAGGTTGGCCAGAGCTCGCACCCTAT GATGCCATCCATGTCGGAGCTGCTGCACCGCAGATTCCACAGGCGTTGATTGAGCAGCTA AAGCCCGGTGGCAGAATGGTGATCCCAGTTGGGACTATGTTCCAGGAGCTGAAAGTGGTG GACAAGAACCAGGATGGCAAGGTCAGCATAAGAGATGAGACGGCTGTGCGCTATGTGCCC CTCACAAGCAAGGATGCGCAGCTGCAGGCTAACTGA

Peptide Sequence

PEP ID	Os08t0557000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27877376:27880017:1 gene:Os08g0557000 transcript:Os08t0557000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROTEIN REPAIR L-ISOASPARTYL METHYLTRANSFERASE 1 description:L-isoaspartate methyltransferase, iso-Asp-containing protein repairing enzyme, Seed vigor and longevity (Os08t0557000-01)
Sequence	MEHRLWSSGASDKNKAMVEQLQRYGIIKSSKVAQVMETIDRGLFVPPGASPYFDSPMPIG YNATISAPHMHASCLELLEKHLQPGMRALDVGSGTGYLTACFAIMVGPEGRAVGVEHIPE LVTSSIENIKKSAAAPQLTDGSLSIHITDGREGWPELAPYDAIHVGAAAPQIPQALIEQL KPGGRMVIPVGTMFQELKVVDKNQDGKVSIRDETAVRYVPLTSKDAQLQAN

Transcript Sequence

Transcript ID	Os08t0557000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27877376:27880017:1 gene:Os08g0557000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROTEIN REPAIR L-ISOASPARTYL METHYLTRANSFERASE 1 description:L-isoaspartate methyltransferase, iso-Asp-containing protein repairing enzyme, Seed vigor and longevity (Os08t0557000-01)
Sequence	CCCCCACCACCACCGCCAGCCACCAGCCACTGCCGCGGCGGGAATCCGGTTCCCGCGGCG ACATCCCCCACGTCTCCGCCGCTGCACCGGCAAAGGCAGCTGCACCGCGACCCACCCGCG CGCTCCCAATCGGCCCCAAGATTAAGATTAAACCAGGAGAGACCACCCGATCGAGTGTTC TCTCACTTTCGCCATGGAGCACCGACTGTGGTCAAGCGGGGCTAGCGACAAGAACAAGGC AATGGTTGAGCAGCTCCAGAGGTACGGGATTATCAAGTCGAGCAAGGTCGCGCAGGTGAT GGAGACCATCGACAGGGGGCTGTTTGTGCCTCCTGGTGCTTCTCCCTATTTCGACAGCCC GATGCCCATCGGTTACAACGCCACCATTTCTGCGCCTCACATGCACGCCTCTTGCTTGGA GCTCCTGGAGAAGCACCTTCAGCCTGGCATGCGTGCTCTGGATGTTGGATCAGGCACAGG GTACCTAACAGCTTGCTTCGCGATTATGGTTGGACCAGAAGGGCGAGCAGTTGGTGTTGA ACATATCCCAGAGTTGGTTACTTCGTCTATTGAAAACATCAAGAAAAGTGCAGCGGCTCC ACAGTTAACTGATGGATCCCTCAGTATACATATTACCGATGGCAGAGAAGGTTGGCCAGA GCTCGCACCCTATGATGCCATCCATGTCGGAGCTGCTGCACCGCAGATTCCACAGGCGTT GATTGAGCAGCTAAAGCCCGGTGGCAGAATGGTGATCCCAGTTGGGACTATGTTCCAGGA GCTGAAAGTGGTGGACAAGAACCAGGATGGCAAGGTCAGCATAAGAGATGAGACGGCTGT GCGCTATGTGCCCCTCACAAGCAAGGATGCGCAGCTGCAGGCTAACTGAATGCACTACCA TAATATTCTGCTGAATGTAAAACCTTCAATGCGTGATCCCAGTTACATCAAGATGTTATT ATTGTACATAAATTGGTCCTACCGTATGTGTGAATCGCTTGGTGCTTGTCAACAATGTTG GATGTTGGTTCGTCATGAAGCATGGAAGTATGTGCTTGTGT