Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0556900-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:27875227:27876577:1 gene:Os08g0556900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cys protease, cysteine protease, senescence-associated gene 12-2 description:Similar to Cysteine proteinase (EC 3.4.22.-). (Os08t0556900-01);Similar to Vignain. (Os08t0556900-02)
Sequence	ATGGAGTTCGGCGACAAGGACGTGGCGTCGGAGGAGGCGCTGTGGGAGCTGTACGAGCGG TGGCGCGGGCAGCACCGGGTGGCGCGGGACCTCGGCGAGAAGGCGCGGCGGTTCAACGTG TTCAAGGACAACGTCCGCCTCATCCACGAGTTCAACCGCCGCGACGAGCCCTACAAGCTC CGCCTCAACCGCTTCGGCGACATGACCGCCGACGAGTTCCGCCGCGCCTACGCCTCCTCC CGCGTCTCCCACCACCGCATGTTCCGCGGCCGCGGCGAGAGGCGCAGCGGCTTCATGTAC GCCGGCGCCCGCGACCTGCCGGCGGCGGTGGACTGGCGCGAGAAGGGCGCCGTCGGGGCG GTCAAGGACCAGGGCCAGTGCGGCAGCTGCTGGGCGTTCTCGACCATCGCCGCCGTGGAA GGGATCAACGCCATCCGCACCAGCAACCTCACCGCGCTGTCGGAGCAGCAGCTCGTCGAC TGCGACACCAAGACCGGCAACGCCGGCTGCGACGGCGGCCTCATGGACAACGCGTTCCAG TACATCGCCAAGCACGGCGGCGTCGCCGCCTCCTCCGCCTACCCGTACCGCGCCCGCCAG AGCTCCTGCAAGAGCTCCGCGGCGTCGTCCCCCGCCGTCACCATCGACGGCTACGAGGAC GTGCCGGCGAACTCGGAGTCGGCGCTGAAGAAGGCGGTGGCGAACCAGCCGGTGTCGGTG GCGATCGAGGCGGGGGGCTCGCACTTCCAGTTCTACTCGGAGGGGGTGTTCGCCGGGAAA TGCGGGACGGAGCTCGACCATGGCGTGGCGGCGGTGGGCTACGGCACGACGGTGGACGGC ACCAAGTACTGGATCGTCAGGAACTCGTGGGGCGCAGACTGGGGTGAGAAGGGCTACATC CGGATGAAGCGCGACGTGTCCGCCAAGGAGGGACTCTGCGGCATCGCCATGGAAGCATCC TACCCCATCAAGACCTCGCCGAACCCGGCGCCCAAGAAGATCAAGAAGGTCACCGACGAC GACGAAGATGATGATGACGAGGAGCACCGCCACCACGACGAACTCTAA

Peptide Sequence

PEP ID	Os08t0556900-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:27875227:27876577:1 gene:Os08g0556900 transcript:Os08t0556900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cys protease, cysteine protease, senescence-associated gene 12-2 description:Similar to Cysteine proteinase (EC 3.4.22.-). (Os08t0556900-01);Similar to Vignain. (Os08t0556900-02)
Sequence	MEFGDKDVASEEALWELYERWRGQHRVARDLGEKARRFNVFKDNVRLIHEFNRRDEPYKL RLNRFGDMTADEFRRAYASSRVSHHRMFRGRGERRSGFMYAGARDLPAAVDWREKGAVGA VKDQGQCGSCWAFSTIAAVEGINAIRTSNLTALSEQQLVDCDTKTGNAGCDGGLMDNAFQ YIAKHGGVAASSAYPYRARQSSCKSSAASSPAVTIDGYEDVPANSESALKKAVANQPVSV AIEAGGSHFQFYSEGVFAGKCGTELDHGVAAVGYGTTVDGTKYWIVRNSWGADWGEKGYI RMKRDVSAKEGLCGIAMEASYPIKTSPNPAPKKIKKVTDDDEDDDDEEHRHHDEL

Transcript Sequence

Transcript ID	Os08t0556900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27875227:27876577:1 gene:Os08g0556900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cys protease, cysteine protease, senescence-associated gene 12-2 description:Similar to Cysteine proteinase (EC 3.4.22.-). (Os08t0556900-01);Similar to Vignain. (Os08t0556900-02)
Sequence	AGTAGTGGTCGTCGTGGCGGCGGCGGCGGTAGCCGTGGCCGTCGTCGTGCTGCTGGGCGC GGCGGCGCCGGCGGCGAGCGCGATGGAGTTCGGCGACAAGGACGTGGCGTCGGAGGAGGC GCTGTGGGAGCTGTACGAGCGGTGGCGCGGGCAGCACCGGGTGGCGCGGGACCTCGGCGA GAAGGCGCGGCGGTTCAACGTGTTCAAGGACAACGTCCGCCTCATCCACGAGTTCAACCG CCGCGACGAGCCCTACAAGCTCCGCCTCAACCGCTTCGGCGACATGACCGCCGACGAGTT CCGCCGCGCCTACGCCTCCTCCCGCGTCTCCCACCACCGCATGTTCCGCGGCCGCGGCGA GAGGCGCAGCGGCTTCATGTACGCCGGCGCCCGCGACCTGCCGGCGGCGGTGGACTGGCG CGAGAAGGGCGCCGTCGGGGCGGTCAAGGACCAGGGCCAGTGCGGCAGCTGCTGGGCGTT CTCGACCATCGCCGCCGTGGAAGGGATCAACGCCATCCGCACCAGCAACCTCACCGCGCT GTCGGAGCAGCAGCTCGTCGACTGCGACACCAAGACCGGCAACGCCGGCTGCGACGGCGG CCTCATGGACAACGCGTTCCAGTACATCGCCAAGCACGGCGGCGTCGCCGCCTCCTCCGC CTACCCGTACCGCGCCCGCCAGAGCTCCTGCAAGAGCTCCGCGGCGTCGTCCCCCGCCGT CACCATCGACGGCTACGAGGACGTGCCGGCGAACTCGGAGTCGGCGCTGAAGAAGGCGGT GGCGAACCAGCCGGTGTCGGTGGCGATCGAGGCGGGGGGCTCGCACTTCCAGTTCTACTC GGAGGGGGTGTTCGCCGGGAAATGCGGGACGGAGCTCGACCATGGCGTGGCGGCGGTGGG CTACGGCACGACGGTGGACGGCACCAAGTACTGGATCGTCAGGAACTCGTGGGGCGCAGA CTGGGGTGAGAAGGGCTACATCCGGATGAAGCGCGACGTGTCCGCCAAGGAGGGACTCTG CGGCATCGCCATGGAAGCATCCTACCCCATCAAGACCTCGCCGAACCCGGCGCCCAAGAA GATCAAGAAGGTCACCGACGACGACGAAGATGATGATGACGAGGAGCACCGCCACCACGA CGAACTCTAAGCTCATTTAATTGTGTGTTTTACAACAGTAACTGGCTACCGTTTGGAGGC GATTGATCGACGTCGTAACAAAATAAGCAGTTCGTTAATTTAATCACCTGTAGTTGATTT GATTGCATGCTCGTATTTTTTGCAATCTAGCTCGATTATGTTTACGCTGTGTAATGATTA TTGATTATTAATTTGAAAAAGATTGTTAAGT