Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0556400-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:27845797:27847571:1 gene:Os08g0556400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, DHHC-type domain containing protein. (Os08t0556400-01);Hypothetical conserved gene. (Os08t0556400-02)
Sequence	ATGATTGCAATGCAGGATGAAGTGATCCCACACCTGGAGGCTGGGATGGTGCCATCAACC ATCGACCCTGACACGGCTGGAAATGCTGAGAGAGCAAACAGAGCCAAGAAGCAAGTGAAG ATCAGCGCGTGGAAGCTCGCCAAGCTTGACACCAACGAGGCCATGAAAGCGGCGGCGAGA GCTCGGGCGTCCTCCTCCGTCCTCCGGCCGGTGGACGCTCGCCACCGCGGCGGCCACGAC GCCGGCGACCTGAGCTCCAGCGGCAACGGCAGCGTCAGGAGCAGCGTGAGCGCCGCCGCC AAGGAGCAGAGGAGGAGGGCGTCCTCTCTCCCGAGCTCGTGCGCGCAGAGCGTGGCGAGC CAGGACGAGTACGAGCAGAGCGGCAGCAGCGTGATGAGCAGCCCGGTGCGCCTCCACAAG CTCGCGCCGCCGCCATTGCCGGCGGCGCACAACGTGCCGCCTCGGCCGCCGCCGCCGGTG AACGCTGCTCCGGAGGCGGCAATACCTCGGCCGCCGCCGCCTGTTCCTCCGGCGACGAGG ATATCCAACCCGATGTTCCAGTCGGCCACGTCGTACGTCCGGGAGAACCGGAGGGCGTCG GTCGTGTGGGACCAGGAGGCCGGCCGGTACGTGTCGGTGGCGCCGGCGCCGGCAACGGCG AGGCCAGGAGGAGGCGGCGGTGGCGCCGAGCAGCCGGCGGCGAGGGCGCCGCCTTTCTTG GCGAACCCAGGTGGCGAGCGCGAGCCATTGAGTGCCGCCCGTAGCCGCAATAATCCCGCC GCGCCCGCGCCCACGAACGCCGCCCCTTCGTCGTCGTCGACGCTGCCGTCGGAGAGGCTG ACGTACTCCGGCCAGTCGATATTCTTCGGCGGGCCACTGCTGGGCGGCGCCGCCGCCGCC GGCGAACCTCGAAGGGACGAGGCGGCGGGGACGAGGGCCCGCGGCGGCGAGTCCTTCCCG GTGTTTGCTCCCGGAACATTCCAGAAGAAGCCGCCACCGTTCCGTAGGTGA

Peptide Sequence

PEP ID	Os08t0556400-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:27845797:27847571:1 gene:Os08g0556400 transcript:Os08t0556400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, DHHC-type domain containing protein. (Os08t0556400-01);Hypothetical conserved gene. (Os08t0556400-02)
Sequence	MIAMQDEVIPHLEAGMVPSTIDPDTAGNAERANRAKKQVKISAWKLAKLDTNEAMKAAAR ARASSSVLRPVDARHRGGHDAGDLSSSGNGSVRSSVSAAAKEQRRRASSLPSSCAQSVAS QDEYEQSGSSVMSSPVRLHKLAPPPLPAAHNVPPRPPPPVNAAPEAAIPRPPPPVPPATR ISNPMFQSATSYVRENRRASVVWDQEAGRYVSVAPAPATARPGGGGGGAEQPAARAPPFL ANPGGEREPLSAARSRNNPAAPAPTNAAPSSSSTLPSERLTYSGQSIFFGGPLLGGAAAA GEPRRDEAAGTRARGGESFPVFAPGTFQKKPPPFRR

Transcript Sequence

Transcript ID	Os08t0556400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27845797:27847571:1 gene:Os08g0556400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, DHHC-type domain containing protein. (Os08t0556400-01);Hypothetical conserved gene. (Os08t0556400-02)
Sequence	TCAGGTAACTGCAAACGATGACCCGTCTCTTCTGAGACAATCTCTCCTGATAAATAAAGA ATCAGATATTGTATCATCTGAATGAATATCAGTATGAATCTTCAAGCTGCAAATAGCATT ACAAAGAACATATTTATCTGAATTCTTGCAAACAACATTGCTAAATAATCTCTCCGTTTT AGGTTATAAGACGTTTTGACTTTGCTAAAAGTCAAACTATTTCAAGTTTGACTAAGTTTA TAGATGAATACAGTAATATTTATAATACTAAATTAGTTTCATCAAATCAATAATTGAATA CATTTCCATAATAAATTAGTCTTGGGTTGAAAATGTTACTAATTTTTTTACAAACTTTAT CAAACTTAAAACAGTTTGACTTTGATTAAAGCAAAGACGTCTTCTAAAATGAAACGGAGG GAGTAGCGCTGTACTATTTCTCTTCTGAATGATTGCAATGCAGGATGAAGTGATCCCACA CCTGGAGGCTGGGATGGTGCCATCAACCATCGACCCTGACACGGCTGGAAATGCTGAGAG AGCAAACAGAGCCAAGAAGCAAGTGAAGATCAGCGCGTGGAAGCTCGCCAAGCTTGACAC CAACGAGGCCATGAAAGCGGCGGCGAGAGCTCGGGCGTCCTCCTCCGTCCTCCGGCCGGT GGACGCTCGCCACCGCGGCGGCCACGACGCCGGCGACCTGAGCTCCAGCGGCAACGGCAG CGTCAGGAGCAGCGTGAGCGCCGCCGCCAAGGAGCAGAGGAGGAGGGCGTCCTCTCTCCC GAGCTCGTGCGCGCAGAGCGTGGCGAGCCAGGACGAGTACGAGCAGAGCGGCAGCAGCGT GATGAGCAGCCCGGTGCGCCTCCACAAGCTCGCGCCGCCGCCATTGCCGGCGGCGCACAA CGTGCCGCCTCGGCCGCCGCCGCCGGTGAACGCTGCTCCGGAGGCGGCAATACCTCGGCC GCCGCCGCCTGTTCCTCCGGCGACGAGGATATCCAACCCGATGTTCCAGTCGGCCACGTC GTACGTCCGGGAGAACCGGAGGGCGTCGGTCGTGTGGGACCAGGAGGCCGGCCGGTACGT GTCGGTGGCGCCGGCGCCGGCAACGGCGAGGCCAGGAGGAGGCGGCGGTGGCGCCGAGCA GCCGGCGGCGAGGGCGCCGCCTTTCTTGGCGAACCCAGGTGGCGAGCGCGAGCCATTGAG TGCCGCCCGTAGCCGCAATAATCCCGCCGCGCCCGCGCCCACGAACGCCGCCCCTTCGTC GTCGTCGACGCTGCCGTCGGAGAGGCTGACGTACTCCGGCCAGTCGATATTCTTCGGCGG GCCACTGCTGGGCGGCGCCGCCGCCGCCGGCGAACCTCGAAGGGACGAGGCGGCGGGGAC GAGGGCCCGCGGCGGCGAGTCCTTCCCGGTGTTTGCTCCCGGAACATTCCAGAAGAAGCC GCCACCGTTCCGTAGGTGAAATCTGCAACTGATGACCGGCAATGGCGATATCATCGCCGG ACAATGCTAATCTCCGGCGAGGTGACACTGGAAGCAGAATCTGCAAGAACAAGTGATCAG CATATGCTGTCGAAGCATTAAAAGGAAGGAAGATTAATTAATGTGGAGTTTTACATCTGA TGAAGTGAAGATAATTACATAACCTTGTCTGATTCAGGAAGAGAGAGAAATCGGGAGCAA AGAGATGTGGTGGGAGCAAAGAGTTTTGTCATGTACAGCATTCTTTTCTCGGTAATTAAT TCCGAACGAAATCATATAAAACTCCGGGAGTTAGT