Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0556000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27825035:27830293:-1 gene:Os08g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to YTH domain protein 2 (High-glucose-regulated protein 8) (NY-REN-2 antigen) (CLL-associated antigen KW-14). (Os08t0556000-01);Similar to predicted protein. (Os08t0556000-02)
Sequence	ATGGAATCGGCGCACGGCGGATCGGATCGCCCAGGCTCAATGGATTCGCAGGAGCCAAGA GTTGATGCTGAACAAAAACCTGTTCTTTCTGATAACCCTGAAGAGCAGACCATTCCTAGC AAAGATGAGAAGGTCCTTGAACCCACCATTTCACACGATTCAAATGGTATCAATCTACCA AGTGAAGGACAAGCCCAAGCTGGCACTTCCAATATAGGTGGGGGACACAATGCTGCATAT CCTCAAACCATGTATTCTTCTCAGGCACAGCCATTCTATTACCAAGGTCCAGGATATGAT AACCCTTCAAATGAATGGGATGGATATCCTCCTTATGTGAGTGTTGAAGGCTTGGAAGCA GGTCCAGCGGTTGTATACAATGATGATCCTCAATTGATGTACCATGGTGGCTATGGCTAT GACCCTTATGCTCATTATTCTCCTATCTCAACGCCTGTACCGGCTGCTGTTAGTGGAGAT GGTCAGCTCTACTCTCCTCAGCAGTTCTCCTTCTCGGCTCCTTACTACCAGCAATCAGTA CCACCTGGCATGCCATATTTAAGCTCTCCTACTCCAATATCACAGGGTGAGGCAATGGTG CCGATTGACCCAACACAAGGGGCTTTTATCGCCGAAACTCTGAGTCCTAACAGCTTCCTT TTCGGACCAAGACCTGAATGGTTCCGATCGTCTGAAGGAAATGGGTCGTTTCCATCACCT GCGGCTTCACCTCAACCTGCTGGTGGCGTTTCAGGGCCCTTTGGACAAAGCAACTTCCCT ATGGCTTCTGGAATGCAATCTCCTCAGCACAGGCCCTTCTATGGTTTTGGGACACCAAGT GACTCTTACGGAAGAGTGTTCTCTCATGGTGGATATTTCCCACAGGCCACTAATTATGGG GGCCCTTTCCCTAGCTTTGGCCTGAATGGTACGAGTTCTATTCCGATGGAAAAAGGCCGC AGGAGAGGAAGGGGCAATGCTCTTCTTTGCAGCTGCAATGGTTCACTTGACTTCCTCAAT GAGCAAAGCCGAGGCCCACGTGCCACTAGGCCTAAGAAGCAACCAGAGGATGGCGGCAAG GATGAGAAGCCTTCTGCAGGCGTTGATTGCGAGTTGTACAACAGGCCTGACTTTGTTACA GAGTACAAGAATGCCAGATTTTTCATCATAAAATCATACAGCGAAGACAATGTGCACAAG AGCATCAAATATGGTGTTTGGGCTAGCACCACAAACGGGAACAAGAAACTAGACTCAGCC TACCGTGAAGCAAAGGAGAAAGAAGAGCATTGCCCAATTTTTCTGCTGTTTTCGGTGAAT GCTAGTGCACAATTCTGTGGTGTTGCAGAGATGATTGGGCCAGTGGATTTTGAGAAGAGT GTTGACTATTGGCAGCAAGATAAGTGGACTGGCCAGTTCCCTGTTAAGTGGCACATTGTG AAGGATGTTCCAAATAATCTTTTCCGCCATATAATTCTTGAAAACAATGATAATAAACCT GTGACCAACAGCCGGGACACACAAGAGGTAAAACTCGAACAAGGTATGGAGATGCTGAAA ATCTTCAAGGATCATGAGGAGGATGCATCGATACTCGATGACTTTGACTTCTACGAGGAG CGTGAGAGAGCCCTGCTGGACAATAAGGCGCGGCTGCATCAGCAACATCAGCTGCCCAGC TCTACTGTGGTTGAGCCCAAGAAGCCCTTGACTGTGGCCACTGATCTAGTTGGTCATATA ACTAAGAGCTTTGCGCAGGCAGTTCGGCTTGGTGAGGCCAAGAATGTGAGCCCTAATTCA GCTGACAAAGGTGCCAGTGGGGATTCATCTGTCGCTGCAAAGCCTTTGGAAGTTAAAGAG GCCGGCTTAGCATAA

Peptide Sequence

PEP ID	Os08t0556000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27825035:27830293:-1 gene:Os08g0556000 transcript:Os08t0556000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to YTH domain protein 2 (High-glucose-regulated protein 8) (NY-REN-2 antigen) (CLL-associated antigen KW-14). (Os08t0556000-01);Similar to predicted protein. (Os08t0556000-02)
Sequence	MESAHGGSDRPGSMDSQEPRVDAEQKPVLSDNPEEQTIPSKDEKVLEPTISHDSNGINLP SEGQAQAGTSNIGGGHNAAYPQTMYSSQAQPFYYQGPGYDNPSNEWDGYPPYVSVEGLEA GPAVVYNDDPQLMYHGGYGYDPYAHYSPISTPVPAAVSGDGQLYSPQQFSFSAPYYQQSV PPGMPYLSSPTPISQGEAMVPIDPTQGAFIAETLSPNSFLFGPRPEWFRSSEGNGSFPSP AASPQPAGGVSGPFGQSNFPMASGMQSPQHRPFYGFGTPSDSYGRVFSHGGYFPQATNYG GPFPSFGLNGTSSIPMEKGRRRGRGNALLCSCNGSLDFLNEQSRGPRATRPKKQPEDGGK DEKPSAGVDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSA YREAKEKEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIV KDVPNNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEE RERALLDNKARLHQQHQLPSSTVVEPKKPLTVATDLVGHITKSFAQAVRLGEAKNVSPNS ADKGASGDSSVAAKPLEVKEAGLA

Transcript Sequence

Transcript ID	Os08t0556000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27825035:27830293:-1 gene:Os08g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to YTH domain protein 2 (High-glucose-regulated protein 8) (NY-REN-2 antigen) (CLL-associated antigen KW-14). (Os08t0556000-01);Similar to predicted protein. (Os08t0556000-02)
Sequence	ATTAATATATAATAAAAGAAGATCGAAGCGAAGCGCACCTCTCTCCTCTTCTTCTTCAAT TGATCAGGTTGAGAGGGACGACAACATCAGATCACGAGCCACGCAATCGCAATCGCAGAG GGGAGAGAGAGAAGAGGGATCGAATCGAATCCAGTCGAGGAGGAGGAGGGCCCCTCGGGC CGATCCGATCGAGAGGAGGAGGGATCCGAGCTGAACGATTCAACCCAAGGCTCGCGGGAT TTGGCGCGAGTTGAGCCATACCGATCCCTCTGCCTTCCGACGGACGGATCCCTGATGGAA TCGGCGCACGGCGGATCGGATCGCCCAGGCTCAATGGATTCGCAGGAGCCAAGAGTTGAT GCTGAACAAAAACCTGTTCTTTCTGATAACCCTGAAGAGCAGACCATTCCTAGCAAAGAT GAGAAGGTCCTTGAACCCACCATTTCACACGATTCAAATGGTATCAATCTACCAAGTGAA GGACAAGCCCAAGCTGGCACTTCCAATATAGGTGGGGGACACAATGCTGCATATCCTCAA ACCATGTATTCTTCTCAGGCACAGCCATTCTATTACCAAGGTCCAGGATATGATAACCCT TCAAATGAATGGGATGGATATCCTCCTTATGTGAGTGTTGAAGGCTTGGAAGCAGGTCCA GCGGTTGTATACAATGATGATCCTCAATTGATGTACCATGGTGGCTATGGCTATGACCCT TATGCTCATTATTCTCCTATCTCAACGCCTGTACCGGCTGCTGTTAGTGGAGATGGTCAG CTCTACTCTCCTCAGCAGTTCTCCTTCTCGGCTCCTTACTACCAGCAATCAGTACCACCT GGCATGCCATATTTAAGCTCTCCTACTCCAATATCACAGGGTGAGGCAATGGTGCCGATT GACCCAACACAAGGGGCTTTTATCGCCGAAACTCTGAGTCCTAACAGCTTCCTTTTCGGA CCAAGACCTGAATGGTTCCGATCGTCTGAAGGAAATGGGTCGTTTCCATCACCTGCGGCT TCACCTCAACCTGCTGGTGGCGTTTCAGGGCCCTTTGGACAAAGCAACTTCCCTATGGCT TCTGGAATGCAATCTCCTCAGCACAGGCCCTTCTATGGTTTTGGGACACCAAGTGACTCT TACGGAAGAGTGTTCTCTCATGGTGGATATTTCCCACAGGCCACTAATTATGGGGGCCCT TTCCCTAGCTTTGGCCTGAATGGTACGAGTTCTATTCCGATGGAAAAAGGCCGCAGGAGA GGAAGGGGCAATGCTCTTCTTTGCAGCTGCAATGGTTCACTTGACTTCCTCAATGAGCAA AGCCGAGGCCCACGTGCCACTAGGCCTAAGAAGCAACCAGAGGATGGCGGCAAGGATGAG AAGCCTTCTGCAGGCGTTGATTGCGAGTTGTACAACAGGCCTGACTTTGTTACAGAGTAC AAGAATGCCAGATTTTTCATCATAAAATCATACAGCGAAGACAATGTGCACAAGAGCATC AAATATGGTGTTTGGGCTAGCACCACAAACGGGAACAAGAAACTAGACTCAGCCTACCGT GAAGCAAAGGAGAAAGAAGAGCATTGCCCAATTTTTCTGCTGTTTTCGGTGAATGCTAGT GCACAATTCTGTGGTGTTGCAGAGATGATTGGGCCAGTGGATTTTGAGAAGAGTGTTGAC TATTGGCAGCAAGATAAGTGGACTGGCCAGTTCCCTGTTAAGTGGCACATTGTGAAGGAT GTTCCAAATAATCTTTTCCGCCATATAATTCTTGAAAACAATGATAATAAACCTGTGACC AACAGCCGGGACACACAAGAGGTAAAACTCGAACAAGGTATGGAGATGCTGAAAATCTTC AAGGATCATGAGGAGGATGCATCGATACTCGATGACTTTGACTTCTACGAGGAGCGTGAG AGAGCCCTGCTGGACAATAAGGCGCGGCTGCATCAGCAACATCAGCTGCCCAGCTCTACT GTGGTTGAGCCCAAGAAGCCCTTGACTGTGGCCACTGATCTAGTTGGTCATATAACTAAG AGCTTTGCGCAGGCAGTTCGGCTTGGTGAGGCCAAGAATGTGAGCCCTAATTCAGCTGAC AAAGGTGCCAGTGGGGATTCATCTGTCGCTGCAAAGCCTTTGGAAGTTAAAGAGGCCGGC TTAGCATAAAGCCCCAGGGTGATTGGTTCATACTGAAAATTCTCTGATCCATGCTCTTCC TCTTTGAAATACTAAGAAATGGGCGAAGACAATGTCCAGCGCTTCTGTCTGGTGAAGCAT TGTACACTAGGATAGGATGGAAGCCTAGCTCCTTAAATAGTTTCTTTTTTTACCTTTCTT TTGTTCCTTATCTTTTCCTGTTGGTAATATTTTTCGTTGCGTTTATATGATGATCGATTC CTTAGTGGCTAGCCTTAAGGAGAGCTGCAGTTTTTGTGCAAGCCTCTGTAAATTTCCCAG TTCAATCGATCTCAAGATGAATAAGGCCTTTTGCCTCCTCCAGTAAAATCCTCTTTAATC TACTTGTCTTATACTGAACAAGGTGTGTCTGGAAAACAACATAACATCTGTTTGGGTGAC CTGGTGATGGTAACAATAACAACTTGTTAATAATAAAGAGAGTGTGACCTTGTGGTGGTC GCTTATG