Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0555800-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27811004:27814418:1 gene:Os08g0555800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0555800-00)
Sequence

ATGGCTCCTCCCGCCTCCCGCCCGCCGACGCCGACGCCGACGCCGACGGCGAATGCGGCG
GCCTCCTCGTCGCGGATAGAGTCGCCGTCGCTCAGGGCGGCCCTCGCCATGGCTCTCATC
CACTACAACCGCCTCCCCTCTCGAGCAGCAGCAGCCGCTGCCCCCTCTCCCCAGGCTCTC
CTCAACTGGAAGCGCAAGGCCAAGGACCGGAAGCGCGAGATCCTCCGCCTCCGCGAGGAG
CTCAAGCTCCTCCAAGACGGGGCGCGCGGGGAGGAGATGGAGCCGCCGGTCGCGTCGTGC
CGATGCCACTTCTTCGACGGGTGCGGGGACCTTCCACCGCCGACGGACGGCGATGCTGGG
GAGCACTGGGTCGACGACGTGCTGCGGAGGAGATTCGTCAGATTGGTGCGGTGGAAGGAT
AAGCGCAGGAGACTGGACAGATCACTGCCCACGAGTAGTTTGATGGAATATAACACTGAG
GATGAGGTACAACAGCTTAGCTTGTCGATTGATTTCCTGGTGGAGTTATCAGATGGCTTG
TTTGCCAAAAGAGAAGCTGGCTCCTCATTTACTACATTTTCTCACCAGGCAGTAGACTTC
ATTCTGGCTTCACTGAAGAACATTCTCTCGTCAGAAAGGGAAAAGGAGATAATCGAGGAG
ATAATCAATGGTTTGGTTGCACGTTTGATGAAAAGGATGTGCACCACTCCTGAAAATGCT
GGATCAGTTGACTGTTCAGATGCCCAATTCTCCCTGCAGCACTTATTCCGTAAGTTAGGA
AATGAGGAGTTTGTTGGTCAGAGGATAATCCTTGCAATTTCTCAAAAGATCTCAAATGTA
TCAGAAAAATTACTTCTGGCAGATCCATTTGATGATGGTTTCCCTGAAATGCATAGCAAT
ATGTTTATTATGATACAATTAATCGAGTTCCTAATATCTGACAGCTTCAACAATTGGCTA
TGCCGTGATCATTTTGACAGAAAACTTTTTGAAGAATGGGTCAGATCTATTCTCAAGGCA
CGAAAGGACTTGGAAGTCCTAGATGGGAGAAACGGACTGTATGTGGTATACATTGAGCGA
GTGATTGGAAGATTGGCAAGGGAGGTAGCTCCTGCTGCTCATCAGGGGAAGCTGGACCTA
GAAGTCCTCTCCAAACTCCTTTACTGA

Peptide Sequence

PEP ID

Os08t0555800-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27811004:27814418:1 gene:Os08g0555800 transcript:Os08t0555800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0555800-00)
Sequence

MAPPASRPPTPTPTPTANAAASSSRIESPSLRAALAMALIHYNRLPSRAAAAAAPSPQAL
LNWKRKAKDRKREILRLREELKLLQDGARGEEMEPPVASCRCHFFDGCGDLPPPTDGDAG
EHWVDDVLRRRFVRLVRWKDKRRRLDRSLPTSSLMEYNTEDEVQQLSLSIDFLVELSDGL
FAKREAGSSFTTFSHQAVDFILASLKNILSSEREKEIIEEIINGLVARLMKRMCTTPENA
GSVDCSDAQFSLQHLFRKLGNEEFVGQRIILAISQKISNVSEKLLLADPFDDGFPEMHSN
MFIMIQLIEFLISDSFNNWLCRDHFDRKLFEEWVRSILKARKDLEVLDGRNGLYVVYIER
VIGRLAREVAPAAHQGKLDLEVLSKLLY

Transcript Sequence

Transcript ID

Os08t0555800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27811004:27814418:1 gene:Os08g0555800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0555800-00)
Sequence

CGCCGAAATCGCCATGGCTCCTCCCGCCTCCCGCCCGCCGACGCCGACGCCGACGCCGAC
GGCGAATGCGGCGGCCTCCTCGTCGCGGATAGAGTCGCCGTCGCTCAGGGCGGCCCTCGC
CATGGCTCTCATCCACTACAACCGCCTCCCCTCTCGAGCAGCAGCAGCCGCTGCCCCCTC
TCCCCAGGCTCTCCTCAACTGGAAGCGCAAGGCCAAGGACCGGAAGCGCGAGATCCTCCG
CCTCCGCGAGGAGCTCAAGCTCCTCCAAGACGGGGCGCGCGGGGAGGAGATGGAGCCGCC
GGTCGCGTCGTGCCGATGCCACTTCTTCGACGGGTGCGGGGACCTTCCACCGCCGACGGA
CGGCGATGCTGGGGAGCACTGGGTCGACGACGTGCTGCGGAGGAGATTCGTCAGATTGGT
GCGGTGGAAGGATAAGCGCAGGAGACTGGACAGATCACTGCCCACGAGTAGTTTGATGGA
ATATAACACTGAGGATGAGGTACAACAGCTTAGCTTGTCGATTGATTTCCTGGTGGAGTT
ATCAGATGGCTTGTTTGCCAAAAGAGAAGCTGGCTCCTCATTTACTACATTTTCTCACCA
GGCAGTAGACTTCATTCTGGCTTCACTGAAGAACATTCTCTCGTCAGAAAGGGAAAAGGA
GATAATCGAGGAGATAATCAATGGTTTGGTTGCACGTTTGATGAAAAGGATGTGCACCAC
TCCTGAAAATGCTGGATCAGTTGACTGTTCAGATGCCCAATTCTCCCTGCAGCACTTATT
CCGTAAGTTAGGAAATGAGGAGTTTGTTGGTCAGAGGATAATCCTTGCAATTTCTCAAAA
GATCTCAAATGTATCAGAAAAATTACTTCTGGCAGATCCATTTGATGATGGTTTCCCTGA
AATGCATAGCAATATGTTTATTATGATACAATTAATCGAGTTCCTAATATCTGACAGCTT
CAACAATTGGCTATGCCGTGATCATTTTGACAGAAAACTTTTTGAAGAATGGGTCAGATC
TATTCTCAAGGCACGAAAGGACTTGGAAGTCCTAGATGGGAGAAACGGACTGTATGTGGT
ATACATTGAGCGAGTGATTGGAAGATTGGCAAGGGAGGTAGCTCCTGCTGCTCATCAGGG
GAAGCTGGACCTAGAAGTCCTCTCCAAACTCCTTTACTGAGAACATGCTGCCTCTGACTC
GCCAATGTATTCACCCACATGTCATTTGGATGGCAATTCTC