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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0555700-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27818486:27818962:-1 gene:Os08g0555700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os08t0555700-00)
Sequence

ATGGAGAAGGAGATCATCAGCGCGAGGTCGACGACGACGACGACGACCACCGCCGCCGCC
GGCGACGTCAACCTCGACCTGCGGCTGGTCCACTCCACGGCGGCCGGCAGGCAGCACACC
GCGGCCACCAGGAACCCGGCGCCGCCTCTCGCCGCCGCCGGCGACGACCGCGCCTTCTCG
TGCACCTACTGCCGGCGCAGGTTCTACAGCTCGCAGGCGCTGGGCGGCCACCAGAACGCG
CACAAGCTCGAGCGCAGCCTCGCCAAGCGCAGCCGCGAGCTCTCCGCCGGCGTCACGACG
GCGGCGGCGCCGCCGCCGCCGCATCCTGAGCTCGGCTGGCCCTACCCGCCGCAGGGCGGC
GCCGCCGCGGCCGTCGTCAGCTGGATCGCCGACGGCGGGCGCCGCTACGGGTACCGCGTG
CACGCCGCGGCAGCCGGCGGCGACGCCGAGGACATCGACCTTTCTCTCAAGTTGTAA

Peptide Sequence

PEP ID

Os08t0555700-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27818486:27818962:-1 gene:Os08g0555700 transcript:Os08t0555700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os08t0555700-00)
Sequence

MEKEIISARSTTTTTTTAAAGDVNLDLRLVHSTAAGRQHTAATRNPAPPLAAAGDDRAFS
CTYCRRRFYSSQALGGHQNAHKLERSLAKRSRELSAGVTTAAAPPPPHPELGWPYPPQGG
AAAAVVSWIADGGRRYGYRVHAAAAGGDAEDIDLSLKL

Transcript Sequence

Transcript ID

Os08t0555700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27818486:27818962:-1 gene:Os08g0555700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os08t0555700-00)
Sequence

ATGGAGAAGGAGATCATCAGCGCGAGGTCGACGACGACGACGACGACCACCGCCGCCGCC
GGCGACGTCAACCTCGACCTGCGGCTGGTCCACTCCACGGCGGCCGGCAGGCAGCACACC
GCGGCCACCAGGAACCCGGCGCCGCCTCTCGCCGCCGCCGGCGACGACCGCGCCTTCTCG
TGCACCTACTGCCGGCGCAGGTTCTACAGCTCGCAGGCGCTGGGCGGCCACCAGAACGCG
CACAAGCTCGAGCGCAGCCTCGCCAAGCGCAGCCGCGAGCTCTCCGCCGGCGTCACGACG
GCGGCGGCGCCGCCGCCGCCGCATCCTGAGCTCGGCTGGCCCTACCCGCCGCAGGGCGGC
GCCGCCGCGGCCGTCGTCAGCTGGATCGCCGACGGCGGGCGCCGCTACGGGTACCGCGTG
CACGCCGCGGCAGCCGGCGGCGACGCCGAGGACATCGACCTTTCTCTCAAGTTGTAA